RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RHPN1-AS1Q9BWJ2 59 aa4.67□□□□□ -1.66
ZNF540-201ENST00000316433 A0A096LNT2 108 aa4.67□□□□□ -1.66
ZNF540-201ENST00000316433 HAMPP81172 84 aa4.67□□□□□ -1.66
ZNF540-201ENST00000316433 ECSCRQ19T08 205 aa4.67□□□□□ -1.66
ZNF540-201ENST00000316433 Q6ZTI0 123 aa4.67□□□□□ -1.66
ZNF540-201ENST00000316433 LRCOL1A6NCL2 159 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 A8MU10 97 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 IGHV3-53P01767 116 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 SYCNQ0VAF6 134 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 IGKV2-28A0A075B6P5 120 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 IGHV3OR16-13A0A075B7E8 117 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 IGHV3-74A0A0B4J1X5 117 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 IGKV2D-28P01615 120 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 CXCL6P80162 114 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 MUC7Q8TAX7 377 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 CHCHD7Q9BUK0 85 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 AHCTF1Q8WYP5 2266 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 CFAP47Q6ZTR5 3102 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 G3V318 75 aa4.66□□□□□ -1.66
ZNF540-201ENST00000316433 IGHV3-38A0A0C4DH36 116 aa4.65□□□□□ -1.66
ZNF540-201ENST00000316433 PTPRQQ9UMZ3 2332 aa4.65□□□□□ -1.66
ZNF540-201ENST00000316433 ZDBF2Q9HCK1 2354 aa4.65□□□□□ -1.67
ZNF540-201ENST00000316433 UBE2L6O14933 153 aa4.65□□□□□ -1.67
ZNF540-201ENST00000316433 CMC4P56277 68 aaPredicted RBP4.65□□□□□ -1.67
ZNF540-201ENST00000316433 FAM186AA6NE01 2351 aa4.65□□□□□ -1.67
ZNF540-201ENST00000316433 A0A1W2PPR1 153 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 PHF5AQ7RTV0 110 aaKnown RBP4.64□□□□□ -1.67
ZNF540-201ENST00000316433 LINC01356Q8N9X3 169 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 LINC00167Q96N53 147 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 SND1-IT1Q9HBX3 110 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 IGHV4-59P01825 116 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 GPR179Q6PRD1 2367 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 URB1O60287 2271 aaKnown RBP4.64□□□□□ -1.67
ZNF540-201ENST00000316433 IGHV3-49A0A0A0MS15 119 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 BPY2O14599 106 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 VPREB1P12018 145 aa4.64□□□□□ -1.67
ZNF540-201ENST00000316433 LINC00269Q8N2A0 174 aa4.63□□□□□ -1.67
ZNF540-201ENST00000316433 C1orf64Q8NEQ6 169 aa4.63□□□□□ -1.67
ZNF540-201ENST00000316433 SPENQ96T58 3664 aaKnown RBP4.63□□□□□ -1.67
ZNF540-201ENST00000316433 A8MUN3 132 aa4.63□□□□□ -1.67
ZNF540-201ENST00000316433 COX6A2Q02221 97 aa4.63□□□□□ -1.67
ZNF540-201ENST00000316433 PRB3Q04118 309 aaPredicted RBP4.63□□□□□ -1.67
ZNF540-201ENST00000316433 Q6ZQT0 140 aa4.63□□□□□ -1.67
ZNF540-201ENST00000316433 PRRC2CQ9Y520 2896 aaKnown RBP4.62□□□□□ -1.67
ZNF540-201ENST00000316433 SMIM1B2RUZ4 78 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 MSMBP08118 114 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 UBE2AP49459 152 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 SERTAD4-AS1Q5TG53 156 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 OTOGLQ3ZCN5 2332 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 C16orf90A8MZG2 172 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 LY6G6DO95868 133 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 NCOR1O75376 2440 aa4.62□□□□□ -1.67
ZNF540-201ENST00000316433 B4DSR2 109 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 GNLYP22749 145 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 DEFB1P60022 68 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 CD164L2Q6UWJ8 174 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
ZNF540-201ENST00000316433 LOC110117498A0A087WWA1 95 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 A6NN06 94 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 H3BQ85 93 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 Q5VV11 94 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 HIGD2AQ9BW72 106 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 PIEZO2Q9H5I5 2752 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 LCA10Q71F78 164 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 PRR26Q8N8Z3 221 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 C4orf3Q8WVX3 66 aa4.61□□□□□ -1.67
ZNF540-201ENST00000316433 DSPP15924 2871 aaKnown RBP4.61□□□□□ -1.67
ZNF540-201ENST00000316433 CACNA1BQ00975 2339 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 PRB1P04280 392 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 ZNF843Q8N446 348 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 Q8N814 137 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 M0R2N4 97 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 LINC00242Q5T6M2 205 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 Q6YL49 198 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 DIRC1Q969H9 104 aa4.6□□□□□ -1.67
ZNF540-201ENST00000316433 LOC100131303A0A0U1RQF7 123 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 LINC00612Q8N6U2 182 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 KRTAP3-3Q9BYR6 98 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 KRTAP3-2Q9BYR7 98 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 ZNF702PQ9H963 129 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 PSCAO43653 123 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 RNASE1P07998 156 aaKnown RBP4.59□□□□□ -1.67
ZNF540-201ENST00000316433 SCXQ7RTU7 201 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 LOC400499M0QZD8 3231 aa4.59□□□□□ -1.67
ZNF540-201ENST00000316433 CCL18P55774 89 aa4.59□□□□□ -1.68
ZNF540-201ENST00000316433 DCHS1Q96JQ0 3298 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 IGHV3OR16-12A0A075B7B8 117 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 IGHV4-61A0A0C4DH41 118 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 CHKB-CPT1BH3BT56 60 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 NTM-AS1Q6ZSK4 140 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 SPATA3Q8NHX4 192 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 ESM1Q9NQ30 184 aa4.58□□□□□ -1.68
ZNF540-201ENST00000316433 H3BUX3 64 aa4.57□□□□□ -1.68
ZNF540-201ENST00000316433 INSP01308 110 aa4.57□□□□□ -1.68
ZNF540-201ENST00000316433 ASPMQ8IZT6 3477 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms