RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ASH1LQ9NR48 2969 aaKnown RBP2.5□□□□□ -2.01
SMCO3-201ENST00000316048 PTPN13Q12923 2485 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 IGLV2-18A0A075B6J9 118 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 A8MWV9 139 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.5□□□□□ -2.01
SMCO3-201ENST00000316048 CCL25O15444 150 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 IGLC3P0DOY3 106 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 C1orf195Q5TG92 126 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 FAM74A4Q5TZK3 123 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 SPANXB1Q9NS25 103 aaPredicted RBP2.5□□□□□ -2.01
SMCO3-201ENST00000316048 POLQO75417 2590 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 CELSR2Q9HCU4 2923 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 CSMD1Q96PZ7 3565 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 SVEP1Q4LDE5 3571 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 IGLV4-69A0A075B6H9 119 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 M0R2P5 195 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 LINC00315P59091 139 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 RPL18AQ02543 176 aaKnown RBP2.5□□□□□ -2.01
SMCO3-201ENST00000316048 ZNF56Q15929 161 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 MPV17L2Q567V2 206 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 RPL39LQ96EH5 51 aaKnown RBP2.5□□□□□ -2.01
SMCO3-201ENST00000316048 PMCHL2Q9BQD1 86 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 PKIGQ9Y2B9 76 aa2.5□□□□□ -2.01
SMCO3-201ENST00000316048 VPS13CQ709C8 3753 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 APCP25054 2843 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 IGLV1-50A0A075B6I6 118 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 TRBV6-5A0A0K0K1A5 114 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 INSL3P51460 131 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 POLR2KP53803 58 aaKnown RBP2.49□□□□□ -2.01
SMCO3-201ENST00000316048 TCTAP57738 103 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 SMAGPQ0VAQ4 97 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 C6orf99Q4VX62 202 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 MORN3Q6PF18 240 aaPredicted RBP2.49□□□□□ -2.01
SMCO3-201ENST00000316048 SLC25A34Q6PIV7 304 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 CIRBP-AS1Q8TBR5 109 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 TOMM6Q96B49 74 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 SCGB3A1Q96QR1 104 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 SNHG12Q9BXW3 62 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 MRPS16Q9Y3D3 137 aaKnown RBP2.49□□□□□ -2.01
SMCO3-201ENST00000316048 TEX15Q9BXT5 2789 aa2.49□□□□□ -2.01
SMCO3-201ENST00000316048 TRBV27A0A0K0K1C4 114 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 SDHAF1A6NFY7 115 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 I3L3M4 83 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 K7ERU9 68 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 M0QY20 66 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 OR13C6PQ8NH95 151 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 CST9LQ9H4G1 147 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 C8orf17Q9NRJ1 99 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 CYSLTR1Q9Y271 337 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 ABCA12Q86UK0 2595 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 CSMD2Q7Z408 3487 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 PDZD2O15018 2839 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 ZFHX3Q15911 3703 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 TRAV12-1A0A0B4J245 112 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 DPM2O94777 84 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 IGKCP01834 107 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 COX8AP10176 69 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 PLNP26678 52 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 Q8N9L7 120 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 ZNRF2Q8NHG8 242 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 TMEM141Q96I45 108 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 TENM4Q6N022 2769 aa2.48□□□□□ -2.01
SMCO3-201ENST00000316048 ITPR3Q14573 2671 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 CELSR1Q9NYQ6 3014 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 CREBBPQ92793 2442 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 TMEM223A0PJW6 202 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 F8VRH5 84 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 AZU1P20160 251 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 RHOHQ15669 191 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 BATFQ16520 125 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 CFAP126Q5VTH2 177 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 C1orf158Q8N1D5 194 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 TMEM263Q8WUH6 116 aaKnown RBP2.47□□□□□ -2.01
SMCO3-201ENST00000316048 CENPEQ02224 2701 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 CHD6Q8TD26 2715 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 TRGV1A0A0A0MS02 117 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 IGHV3-73A0A0B4J1V6 119 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 FAM236DA0A1B0GTK5 79 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 IGHV3-53P01767 116 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 PRM2P04554 102 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 FAM236CP0DP71 79 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 PMVKQ15126 192 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 RRN3P1Q2M238 152 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 RNASE13Q5GAN3 156 aaKnown RBP2.47□□□□□ -2.01
SMCO3-201ENST00000316048 COL5A1-AS1Q5SY13 56 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 SH2D6Q7Z4S9 175 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 ORAOV1Q8WV07 137 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 MRPL16Q9NX20 251 aaKnown RBP2.47□□□□□ -2.01
SMCO3-201ENST00000316048 MRPL35Q9NZE8 188 aaKnown RBP2.47□□□□□ -2.01
SMCO3-201ENST00000316048 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 HHLA3Q9XRX5 114 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 MUC4Q99102 2169 aa2.47□□□□□ -2.01
SMCO3-201ENST00000316048 MAP1AP78559 2803 aaPredicted RBP2.46□□□□□ -2.01
SMCO3-201ENST00000316048 IGIPA6NJ69 53 aa2.46□□□□□ -2.02
SMCO3-201ENST00000316048 HINT1P49773 126 aaPredicted RBP2.46□□□□□ -2.02
SMCO3-201ENST00000316048 NEGR1Q7Z3B1 354 aa2.46□□□□□ -2.02
SMCO3-201ENST00000316048 KLK12Q9UKR0 248 aa2.46□□□□□ -2.02
SMCO3-201ENST00000316048 TRGV2A0A075B6R0 118 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms