RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 RBM3P98179 157 aaKnown RBP9.29□□□□□ -0.92
SH3PXD2A-201ENST00000315994 UQCRQO14949 82 aa9.29□□□□□ -0.92
SH3PXD2A-201ENST00000315994 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
SH3PXD2A-201ENST00000315994 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
SH3PXD2A-201ENST00000315994 CDC42SE2Q9NRR3 84 aa9.28□□□□□ -0.92
SH3PXD2A-201ENST00000315994 NANOS2P60321 138 aaKnown RBP9.27□□□□□ -0.93
SH3PXD2A-201ENST00000315994 PDE6GP18545 87 aa9.27□□□□□ -0.93
SH3PXD2A-201ENST00000315994 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
SH3PXD2A-201ENST00000315994 A8MZ25 164 aa9.26□□□□□ -0.93
SH3PXD2A-201ENST00000315994 TMEM258P61165 79 aa9.26□□□□□ -0.93
SH3PXD2A-201ENST00000315994 MP68P56378 58 aa9.26□□□□□ -0.93
SH3PXD2A-201ENST00000315994 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
SH3PXD2A-201ENST00000315994 H0Y9J4 135 aa9.25□□□□□ -0.93
SH3PXD2A-201ENST00000315994 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
SH3PXD2A-201ENST00000315994 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
SH3PXD2A-201ENST00000315994 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
SH3PXD2A-201ENST00000315994 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
SH3PXD2A-201ENST00000315994 M0QXV9 152 aa9.24□□□□□ -0.93
SH3PXD2A-201ENST00000315994 NDUFC2O95298 119 aa9.24□□□□□ -0.93
SH3PXD2A-201ENST00000315994 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
SH3PXD2A-201ENST00000315994 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
SH3PXD2A-201ENST00000315994 XAGE1AQ9HD64 81 aa9.24□□□□□ -0.93
SH3PXD2A-201ENST00000315994 UTRNP46939 3433 aa9.23□□□□□ -0.93
SH3PXD2A-201ENST00000315994 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
SH3PXD2A-201ENST00000315994 FHL2Q14192 279 aa9.23□□□□□ -0.93
SH3PXD2A-201ENST00000315994 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
SH3PXD2A-201ENST00000315994 IGKV3D-7A0A0C4DH55 119 aa9.22□□□□□ -0.93
SH3PXD2A-201ENST00000315994 Q8IZM0 81 aa9.22□□□□□ -0.93
SH3PXD2A-201ENST00000315994 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
SH3PXD2A-201ENST00000315994 RETNQ9HD89 108 aa9.22□□□□□ -0.93
SH3PXD2A-201ENST00000315994 COX17Q14061 63 aa9.22□□□□□ -0.93
SH3PXD2A-201ENST00000315994 TRIAP1O43715 76 aa9.21□□□□□ -0.93
SH3PXD2A-201ENST00000315994 DNAH12Q6ZR08 3092 aa9.21□□□□□ -0.93
SH3PXD2A-201ENST00000315994 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
SH3PXD2A-201ENST00000315994 MUC7Q8TAX7 377 aa9.21□□□□□ -0.94
SH3PXD2A-201ENST00000315994 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
SH3PXD2A-201ENST00000315994 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
SH3PXD2A-201ENST00000315994 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
SH3PXD2A-201ENST00000315994 ABCA2Q9BZC7 2435 aa9.2□□□□□ -0.94
SH3PXD2A-201ENST00000315994 DSCAML1Q8TD84 2053 aa9.2□□□□□ -0.94
SH3PXD2A-201ENST00000315994 Q6Q795 121 aa9.19□□□□□ -0.94
SH3PXD2A-201ENST00000315994 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
SH3PXD2A-201ENST00000315994 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
SH3PXD2A-201ENST00000315994 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
SH3PXD2A-201ENST00000315994 A0A096LNI7 61 aa9.18□□□□□ -0.94
SH3PXD2A-201ENST00000315994 C6orf99Q4VX62 202 aa9.18□□□□□ -0.94
SH3PXD2A-201ENST00000315994 M0R378 163 aa9.17□□□□□ -0.94
SH3PXD2A-201ENST00000315994 FSHBP01225 129 aa9.17□□□□□ -0.94
SH3PXD2A-201ENST00000315994 LINC00694P0DN24 101 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 Q6ZTC4 211 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 POM121L12Q8N7R1 296 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 AMELXQ99217 191 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 Q6ZSN1 163 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 SORL1Q92673 2214 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 SMIM1B2RUZ4 78 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 FHL3Q13643 280 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
SH3PXD2A-201ENST00000315994 COL27A1Q8IZC6 1860 aaPredicted RBP9.15□□□□□ -0.94
SH3PXD2A-201ENST00000315994 MYO9AB2RTY4 2548 aa9.15□□□□□ -0.94
SH3PXD2A-201ENST00000315994 IGLV4-60A0A075B6I1 120 aa9.15□□□□□ -0.95
SH3PXD2A-201ENST00000315994 TET2Q6N021 2002 aaPredicted RBP9.15□□□□□ -0.95
SH3PXD2A-201ENST00000315994 A0A096LNJ9 63 aa9.15□□□□□ -0.95
SH3PXD2A-201ENST00000315994 CYSRT1A8MQ03 144 aa9.15□□□□□ -0.95
SH3PXD2A-201ENST00000315994 BRK1Q8WUW1 75 aa9.15□□□□□ -0.95
SH3PXD2A-201ENST00000315994 SLPIP03973 132 aa9.14□□□□□ -0.95
SH3PXD2A-201ENST00000315994 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
SH3PXD2A-201ENST00000315994 IGLV5-52A0A0A0MRZ9 124 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 SEC61GP60059 68 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 COX6A2Q02221 97 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 KLK9Q2XQG4 91 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 C11orf72Q8NBR9 251 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 ZNF462Q96JM2 2506 aa9.13□□□□□ -0.95
SH3PXD2A-201ENST00000315994 IGKV4-1P06312 121 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 A0A1B0GUV1 79 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 MYO18BQ8IUG5 2567 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 UPK3BQ9BT76 320 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
SH3PXD2A-201ENST00000315994 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
SH3PXD2A-201ENST00000315994 LST1O00453 97 aa9.11□□□□□ -0.95
SH3PXD2A-201ENST00000315994 COX7CP15954 63 aa9.11□□□□□ -0.95
SH3PXD2A-201ENST00000315994 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
SH3PXD2A-201ENST00000315994 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
SH3PXD2A-201ENST00000315994 CASC2Q6XLA1 102 aa9.1□□□□□ -0.95
SH3PXD2A-201ENST00000315994 V9GYY9 64 aa9.1□□□□□ -0.95
SH3PXD2A-201ENST00000315994 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
SH3PXD2A-201ENST00000315994 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
SH3PXD2A-201ENST00000315994 UNQ6190/PRO20217Q6UXQ8 127 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 FAM236DA0A1B0GTK5 79 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 BPY2O14599 106 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 FAM236CP0DP71 79 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 LYPD5Q6UWN5 251 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
SH3PXD2A-201ENST00000315994 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms