RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CXCL5P42830 114 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 AMELXQ99217 191 aa4.42□□□□□ -1.7
PRKDC-201ENST00000314191 RMI2Q96E14 147 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 CLUHP3Q96NS8 147 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 FHL3Q13643 280 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 XAGE1AQ9HD64 81 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 ORMDL1Q9P0S3 153 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 B5MCH6 92 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 ACYP1P07311 99 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 HAMPP81172 84 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 RBM3P98179 157 aaKnown RBP4.41□□□□□ -1.7
PRKDC-201ENST00000314191 H3BT86 120 aa4.41□□□□□ -1.7
PRKDC-201ENST00000314191 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.7
PRKDC-201ENST00000314191 DEFB105AQ8NG35 78 aa4.4□□□□□ -1.7
PRKDC-201ENST00000314191 ATOX1O00244 68 aa4.4□□□□□ -1.7
PRKDC-201ENST00000314191 IBA57-AS1B1ANH7 110 aa4.4□□□□□ -1.7
PRKDC-201ENST00000314191 NTM-AS1Q6ZSK4 140 aa4.4□□□□□ -1.7
PRKDC-201ENST00000314191 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.7
PRKDC-201ENST00000314191 CHD9Q3L8U1 2897 aa4.4□□□□□ -1.71
PRKDC-201ENST00000314191 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
PRKDC-201ENST00000314191 SLPIP03973 132 aa4.4□□□□□ -1.71
PRKDC-201ENST00000314191 TRBV30A0A0K0K1B3 111 aa4.39□□□□□ -1.71
PRKDC-201ENST00000314191 UFSP1Q6NVU6 142 aa4.39□□□□□ -1.71
PRKDC-201ENST00000314191 TIMM17BO60830 172 aa4.39□□□□□ -1.71
PRKDC-201ENST00000314191 UBL5Q9BZL1 73 aa4.39□□□□□ -1.71
PRKDC-201ENST00000314191 NANOS2P60321 138 aaKnown RBP4.38□□□□□ -1.71
PRKDC-201ENST00000314191 PKIGQ9Y2B9 76 aa4.38□□□□□ -1.71
PRKDC-201ENST00000314191 TNRC6BQ9UPQ9 1833 aaKnown RBP4.38□□□□□ -1.71
PRKDC-201ENST00000314191 KPRPQ5T749 579 aaPredicted RBP4.38□□□□□ -1.71
PRKDC-201ENST00000314191 CD164L2Q6UWJ8 174 aa4.38□□□□□ -1.71
PRKDC-201ENST00000314191 C14orf132Q9NPU4 83 aa4.38□□□□□ -1.71
PRKDC-201ENST00000314191 LELP1Q5T871 98 aa4.38□□□□□ -1.71
PRKDC-201ENST00000314191 Q6ZTC4 211 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 UBE2BP63146 152 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 DSCR8Q96T75 97 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 NAV2Q8IVL1 2488 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 XIRP2A4UGR9 3374 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 F8WEM9 126 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
PRKDC-201ENST00000314191 IGKV3D-7A0A0C4DH55 119 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 MT-ATP8P03928 68 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
PRKDC-201ENST00000314191 H3BQ85 93 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 LST1O00453 97 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 UNQ6190/PRO20217Q6UXQ8 127 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 NOTCH2Q04721 2471 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 C6orf99Q4VX62 202 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 DIRC1Q969H9 104 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 VPREB1P12018 145 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 ZNF575Q86XF7 245 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 PRR3P79522 188 aaKnown RBP4.36□□□□□ -1.71
PRKDC-201ENST00000314191 RNF183Q96D59 192 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
PRKDC-201ENST00000314191 IGF2RP11717 2491 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 KRTAP1-3Q8IUG1 177 aa4.36□□□□□ -1.71
PRKDC-201ENST00000314191 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
PRKDC-201ENST00000314191 CELA1Q9UNI1 258 aa4.35□□□□□ -1.71
PRKDC-201ENST00000314191 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
PRKDC-201ENST00000314191 X6R8D5 127 aa4.35□□□□□ -1.71
PRKDC-201ENST00000314191 CYSRT1A8MQ03 144 aa4.35□□□□□ -1.71
PRKDC-201ENST00000314191 hADV29S1A0JD25 119 aa4.34□□□□□ -1.71
PRKDC-201ENST00000314191 KRTAP10-3P60369 221 aa4.34□□□□□ -1.71
PRKDC-201ENST00000314191 C5orf42Q9H799 3197 aa4.34□□□□□ -1.71
PRKDC-201ENST00000314191 PRRC2CQ9Y520 2896 aaKnown RBP4.34□□□□□ -1.71
PRKDC-201ENST00000314191 JMJD7-PLA2G4BH0Y9G9 81 aa4.34□□□□□ -1.72
PRKDC-201ENST00000314191 SZT2Q5T011 3432 aa4.34□□□□□ -1.72
PRKDC-201ENST00000314191 A8MTW9 85 aa4.34□□□□□ -1.72
PRKDC-201ENST00000314191 Q8IZM0 81 aa4.34□□□□□ -1.72
PRKDC-201ENST00000314191 A0A087WZ39 114 aa4.34□□□□□ -1.72
PRKDC-201ENST00000314191 TRAV10A0A0B4J240 114 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 SYCNQ0VAF6 134 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 KRTAP24-1Q3LI83 254 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 COX7BP24311 80 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 IGKV2-28A0A075B6P5 120 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 IGKV2D-28P01615 120 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 LYPD5Q6UWN5 251 aa4.33□□□□□ -1.72
PRKDC-201ENST00000314191 WFDC10BQ8IUB3 73 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
PRKDC-201ENST00000314191 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.32□□□□□ -1.72
PRKDC-201ENST00000314191 FAM236AA0A1B0GUQ0 79 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 FAM236BA0A1B0GV22 79 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 TMEM256-PLSCR3K7ERE1 68 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 XGP55808 180 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 C6orf223Q8N319 242 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 IGHV3OR16-9A0A0B4J2B5 98 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 Q6ZQY7 126 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 Q8N3U1 123 aa4.32□□□□□ -1.72
PRKDC-201ENST00000314191 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 KRTAP1-1Q07627 177 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 NDUFC1O43677 76 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 FAM19A5Q7Z5A7 132 aaPredicted RBP4.31□□□□□ -1.72
PRKDC-201ENST00000314191 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 K7ERS5 55 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 HIGD2AQ9BW72 106 aa4.31□□□□□ -1.72
PRKDC-201ENST00000314191 SMCPP49901 116 aaPredicted RBP4.31□□□□□ -1.72
PRKDC-201ENST00000314191 SEC61GP60059 68 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms