RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 UBE2D4Q9Y2X8 147 aa5.32□□□□□ -1.56
MSL3-201ENST00000312196 OR10D4PQ8NGN7 298 aa5.31□□□□□ -1.56
MSL3-201ENST00000312196 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
MSL3-201ENST00000312196 APOC3P02656 99 aa5.31□□□□□ -1.56
MSL3-201ENST00000312196 MRPL51Q4U2R6 128 aaKnown RBP5.31□□□□□ -1.56
MSL3-201ENST00000312196 AMN1Q8IY45 258 aa5.31□□□□□ -1.56
MSL3-201ENST00000312196 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 TMEM218A2RU14 115 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 K7EMI3 77 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 APOMO95445 188 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 FCER1GP30273 86 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 SEC61GP60059 68 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 CARD19Q96LW7 228 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 FLG2Q5D862 2391 aaPredicted RBP5.3□□□□□ -1.56
MSL3-201ENST00000312196 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 COX7A2LO14548 114 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 SYCNQ0VAF6 134 aa5.3□□□□□ -1.56
MSL3-201ENST00000312196 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
MSL3-201ENST00000312196 HBBP68871 147 aa5.29□□□□□ -1.56
MSL3-201ENST00000312196 PRR3P79522 188 aaKnown RBP5.29□□□□□ -1.56
MSL3-201ENST00000312196 PNRC1Q12796 327 aaPredicted RBP5.29□□□□□ -1.56
MSL3-201ENST00000312196 SPINK6Q6UWN8 80 aa5.29□□□□□ -1.56
MSL3-201ENST00000312196 HNRNPA3P51991 378 aaKnown RBP5.29□□□□□ -1.56
MSL3-201ENST00000312196 ADIRFQ15847 76 aa5.29□□□□□ -1.56
MSL3-201ENST00000312196 SMIM2Q9BVW6 85 aa5.29□□□□□ -1.56
MSL3-201ENST00000312196 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 GAS8-AS1O95177 125 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 PRSS3P2Q8NHM4 247 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 LINC01600Q96MT4 127 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
MSL3-201ENST00000312196 PTTG1IPP53801 180 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 COX6A2Q02221 97 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 SRSF9Q13242 221 aaKnown RBP eCLIP5.28□□□□□ -1.56
MSL3-201ENST00000312196 IMMP2LQ96T52 175 aa5.28□□□□□ -1.56
MSL3-201ENST00000312196 MRPL35Q9NZE8 188 aaKnown RBP5.28□□□□□ -1.56
MSL3-201ENST00000312196 A0A096LNI7 61 aa5.27□□□□□ -1.57
MSL3-201ENST00000312196 CKS2P33552 79 aa5.27□□□□□ -1.57
MSL3-201ENST00000312196 XCL1P47992 114 aa5.27□□□□□ -1.57
MSL3-201ENST00000312196 HIGD2BQ4VC39 106 aa5.27□□□□□ -1.57
MSL3-201ENST00000312196 CBLN2Q8IUK8 224 aa5.27□□□□□ -1.57
MSL3-201ENST00000312196 EIF4EBP3O60516 100 aaPredicted RBP5.26□□□□□ -1.57
MSL3-201ENST00000312196 Q6ZRP5 223 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 TRAV9-1A0A075B6T8 112 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 TMEM238C9JI98 176 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 CHTF8P0CG12 524 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 REG3GQ6UW15 175 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 LINC00518Q8N0U6 118 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 STPG4Q8N801 248 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
MSL3-201ENST00000312196 IGHV3OR16-9A0A0B4J2B5 98 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 LINC01549A6NIU2 74 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 ORMDL3Q8N138 153 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 SMKR1H3BMG3 65 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 DPH3Q96FX2 82 aa5.25□□□□□ -1.57
MSL3-201ENST00000312196 PACRGQ96M98 296 aaPredicted RBP5.25□□□□□ -1.57
MSL3-201ENST00000312196 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
MSL3-201ENST00000312196 Q6ZUT4 128 aa5.24□□□□□ -1.57
MSL3-201ENST00000312196 A0A0J9YXV3 536 aa5.24□□□□□ -1.57
MSL3-201ENST00000312196 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.24□□□□□ -1.57
MSL3-201ENST00000312196 MT-ND4LP03901 98 aa5.24□□□□□ -1.57
MSL3-201ENST00000312196 Q8N8P6 123 aa5.24□□□□□ -1.57
MSL3-201ENST00000312196 RPS10P5Q9NQ39 176 aa5.24□□□□□ -1.57
MSL3-201ENST00000312196 A0A087WZ39 114 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 TRBV30A0A0K0K1B3 111 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 D6R8Y8 96 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 NPYP01303 97 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 TMEM136Q6ZRR5 245 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 CAMK2N2Q96S95 79 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 NDUFA1O15239 70 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 SPAG11BQ08648 103 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 C10orf91Q5T1B1 145 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 UQCC3Q6UW78 93 aa5.23□□□□□ -1.57
MSL3-201ENST00000312196 LINC01546A6NGU7 62 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 IFI27P40305 119 aaPredicted RBP5.22□□□□□ -1.57
MSL3-201ENST00000312196 ORMDL2Q53FV1 153 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 AMELXQ99217 191 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 SEC11CQ9BY50 192 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 MAP1LC3AQ9H492 121 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 TGIF2-C20orf24A0A0A6YYL0 155 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 RAB5AP20339 215 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 SEC11AP67812 179 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 PAPPA-AS1Q5QFB9 102 aa5.22□□□□□ -1.57
MSL3-201ENST00000312196 IGLV4-3A0A075B6K6 122 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 IFITM10A6NMD0 228 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 KIAA0087Q14695 138 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 VAMP3Q15836 100 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 COX19Q49B96 90 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 BOD1L2Q8IYS8 172 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
MSL3-201ENST00000312196 NXT2Q9NPJ8 142 aaKnown RBP5.21□□□□□ -1.58
MSL3-201ENST00000312196 TRAV13-1A0A0B4J241 112 aa5.2□□□□□ -1.58
MSL3-201ENST00000312196 IGKV2-24A0A0C4DH68 120 aa5.2□□□□□ -1.58
MSL3-201ENST00000312196 UBE2D1P51668 147 aa5.2□□□□□ -1.58
MSL3-201ENST00000312196 MRPL54Q6P161 138 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 308 ms