RNA–Protein interactions for RNA: ENST00000311832.5

COMMD1-201, Transcript of copper metabolism domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-201ENST00000311832 SPAG11BQ08648 103 aa11.75□□□□□ -0.53
COMMD1-201ENST00000311832 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
COMMD1-201ENST00000311832 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
COMMD1-201ENST00000311832 CAMK2N2Q96S95 79 aa11.75□□□□□ -0.53
COMMD1-201ENST00000311832 LAMTOR2Q9Y2Q5 125 aa11.75□□□□□ -0.53
COMMD1-201ENST00000311832 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
COMMD1-201ENST00000311832 MT1HL1P0DM35 61 aa11.74□□□□□ -0.53
COMMD1-201ENST00000311832 RAB5AP20339 215 aa11.74□□□□□ -0.53
COMMD1-201ENST00000311832 PRR3P79522 188 aaKnown RBP11.74□□□□□ -0.53
COMMD1-201ENST00000311832 MAP1LC3AQ9H492 121 aa11.74□□□□□ -0.53
COMMD1-201ENST00000311832 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
COMMD1-201ENST00000311832 PYGO1Q9Y3Y4 419 aa11.74□□□□□ -0.53
COMMD1-201ENST00000311832 LOC107984640A0A0U1RRK4 108 aa11.73□□□□□ -0.53
COMMD1-201ENST00000311832 Q8N8P6 123 aa11.73□□□□□ -0.53
COMMD1-201ENST00000311832 OR10D4PQ8NGN7 298 aa11.73□□□□□ -0.53
COMMD1-201ENST00000311832 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
COMMD1-201ENST00000311832 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
COMMD1-201ENST00000311832 TMEM218A2RU14 115 aa11.72□□□□□ -0.53
COMMD1-201ENST00000311832 APOMO95445 188 aa11.72□□□□□ -0.53
COMMD1-201ENST00000311832 IFI27P40305 119 aaPredicted RBP11.72□□□□□ -0.53
COMMD1-201ENST00000311832 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
COMMD1-201ENST00000311832 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
COMMD1-201ENST00000311832 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
COMMD1-201ENST00000311832 UQCC3Q6UW78 93 aa11.71□□□□□ -0.53
COMMD1-201ENST00000311832 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
COMMD1-201ENST00000311832 IMMP2LQ96T52 175 aa11.71□□□□□ -0.53
COMMD1-201ENST00000311832 A0A1W2PNN7 141 aa11.7□□□□□ -0.54
COMMD1-201ENST00000311832 LINC00173Q6ZV60 143 aa11.7□□□□□ -0.54
COMMD1-201ENST00000311832 C10orf25Q5T742 122 aa11.69□□□□□ -0.54
COMMD1-201ENST00000311832 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
COMMD1-201ENST00000311832 TMEM141Q96I45 108 aa11.69□□□□□ -0.54
COMMD1-201ENST00000311832 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
COMMD1-201ENST00000311832 A0A087WZ39 114 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 UBE2D1P51668 147 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 RPL18AQ02543 176 aaKnown RBP11.67□□□□□ -0.54
COMMD1-201ENST00000311832 KIAA0087Q14695 138 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 AMELXQ99217 191 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
COMMD1-201ENST00000311832 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
COMMD1-201ENST00000311832 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
COMMD1-201ENST00000311832 SEC11CQ9BY50 192 aa11.66□□□□□ -0.54
COMMD1-201ENST00000311832 IGIPA6NJ69 53 aa11.65□□□□□ -0.54
COMMD1-201ENST00000311832 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
COMMD1-201ENST00000311832 C9orf116Q5BN46 136 aaPredicted RBP11.65□□□□□ -0.54
COMMD1-201ENST00000311832 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
COMMD1-201ENST00000311832 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
COMMD1-201ENST00000311832 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
COMMD1-201ENST00000311832 C6orf48Q9UBA6 75 aa11.65□□□□□ -0.54
COMMD1-201ENST00000311832 NXT2Q9NPJ8 142 aaKnown RBP11.64□□□□□ -0.55
COMMD1-201ENST00000311832 TRAV9-1A0A075B6T8 112 aa11.63□□□□□ -0.55
COMMD1-201ENST00000311832 F8WDY8 70 aa11.63□□□□□ -0.55
COMMD1-201ENST00000311832 K7EMI3 77 aa11.63□□□□□ -0.55
COMMD1-201ENST00000311832 NDUFA1O15239 70 aa11.63□□□□□ -0.55
COMMD1-201ENST00000311832 Q6ZRP5 223 aa11.63□□□□□ -0.55
COMMD1-201ENST00000311832 COMMD7Q86VX2 200 aa11.63□□□□□ -0.55
COMMD1-201ENST00000311832 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
COMMD1-201ENST00000311832 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
COMMD1-201ENST00000311832 FAM19A3Q7Z5A8 133 aa11.62□□□□□ -0.55
COMMD1-201ENST00000311832 NPSP0C0P6 89 aa11.61□□□□□ -0.55
COMMD1-201ENST00000311832 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
COMMD1-201ENST00000311832 PHF5AQ7RTV0 110 aaKnown RBP11.61□□□□□ -0.55
COMMD1-201ENST00000311832 C2orf88Q9BSF0 95 aa11.61□□□□□ -0.55
COMMD1-201ENST00000311832 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
COMMD1-201ENST00000311832 C2orf82Q6UX34 121 aa11.6□□□□□ -0.55
COMMD1-201ENST00000311832 Q6ZN92 141 aa11.6□□□□□ -0.55
COMMD1-201ENST00000311832 LINC01561Q8N1V8 128 aa11.6□□□□□ -0.55
COMMD1-201ENST00000311832 TOMM6Q96B49 74 aa11.6□□□□□ -0.55
COMMD1-201ENST00000311832 UBR4Q5T4S7 5183 aa11.6□□□□□ -0.55
COMMD1-201ENST00000311832 KRTAP7-1Q8IUC3 87 aa11.59□□□□□ -0.55
COMMD1-201ENST00000311832 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
COMMD1-201ENST00000311832 VCX2Q9H322 139 aa11.59□□□□□ -0.55
COMMD1-201ENST00000311832 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
COMMD1-201ENST00000311832 LINC01600Q96MT4 127 aa11.58□□□□□ -0.56
COMMD1-201ENST00000311832 TIMM17AQ99595 171 aa11.58□□□□□ -0.56
COMMD1-201ENST00000311832 ALKBH7Q9BT30 221 aaPredicted RBP11.58□□□□□ -0.56
COMMD1-201ENST00000311832 PSORS1C2Q9UIG4 136 aa11.58□□□□□ -0.56
COMMD1-201ENST00000311832 LINC01546A6NGU7 62 aa11.57□□□□□ -0.56
COMMD1-201ENST00000311832 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
COMMD1-201ENST00000311832 S100PP25815 95 aa11.56□□□□□ -0.56
COMMD1-201ENST00000311832 CARHSP1Q9Y2V2 147 aaKnown RBP11.56□□□□□ -0.56
COMMD1-201ENST00000311832 TRBV30A0A0K0K1B3 111 aa11.55□□□□□ -0.56
COMMD1-201ENST00000311832 ODF1Q14990 250 aa11.55□□□□□ -0.56
COMMD1-201ENST00000311832 GAGE2EQ4V326 116 aa11.55□□□□□ -0.56
COMMD1-201ENST00000311832 GAGE2DQ9UEU5 116 aa11.55□□□□□ -0.56
COMMD1-201ENST00000311832 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
COMMD1-201ENST00000311832 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
COMMD1-201ENST00000311832 RHEBQ15382 184 aa11.53□□□□□ -0.56
COMMD1-201ENST00000311832 ERASQ7Z444 233 aa11.53□□□□□ -0.56
COMMD1-201ENST00000311832 FAM19A5Q7Z5A7 132 aaPredicted RBP11.53□□□□□ -0.56
COMMD1-201ENST00000311832 MRPL18Q9H0U6 180 aaKnown RBP11.53□□□□□ -0.56
COMMD1-201ENST00000311832 G0S2P27469 103 aa11.52□□□□□ -0.57
COMMD1-201ENST00000311832 HERVK_113P63121 156 aa11.52□□□□□ -0.57
COMMD1-201ENST00000311832 C9orf129Q5T035 196 aaKnown RBP11.52□□□□□ -0.57
COMMD1-201ENST00000311832 Q8IZM0 81 aa11.52□□□□□ -0.57
COMMD1-201ENST00000311832 RPS10P5Q9NQ39 176 aa11.52□□□□□ -0.57
COMMD1-201ENST00000311832 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.57
COMMD1-201ENST00000311832 NDUFC2-KCTD14E9PQ53 114 aa11.51□□□□□ -0.57
COMMD1-201ENST00000311832 MT-ND6P03923 174 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms