RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TP73-AS1Q9UF72 201 aa15.32■□□□□ 0.04
IRF3-201ENST00000309877 HNRNPA3P51991 378 aaKnown RBP15.32■□□□□ 0.04
IRF3-201ENST00000309877 APLNQ9ULZ1 77 aa15.32■□□□□ 0.04
IRF3-201ENST00000309877 DLEU1O43261 78 aa15.31■□□□□ 0.04
IRF3-201ENST00000309877 LINC01556Q5JQF7 62 aa15.31■□□□□ 0.04
IRF3-201ENST00000309877 IGHV1-58A0A0C4DH39 117 aa15.3■□□□□ 0.04
IRF3-201ENST00000309877 CRPP02741 224 aa15.3■□□□□ 0.04
IRF3-201ENST00000309877 XCL1P47992 114 aa15.3■□□□□ 0.04
IRF3-201ENST00000309877 PLEKHB2Q96CS7 222 aa15.3■□□□□ 0.04
IRF3-201ENST00000309877 PRR34Q9NV39 138 aa15.3■□□□□ 0.04
IRF3-201ENST00000309877 TRAV8-3A0A0A6YYJ7 113 aa15.29■□□□□ 0.04
IRF3-201ENST00000309877 J3QQQ9 107 aa15.29■□□□□ 0.04
IRF3-201ENST00000309877 LGALS3P17931 250 aaKnown RBP15.29■□□□□ 0.04
IRF3-201ENST00000309877 SIVA1O15304 175 aa15.28■□□□□ 0.04
IRF3-201ENST00000309877 MAPKAPK5-AS1Q8N8E1 139 aa15.28■□□□□ 0.04
IRF3-201ENST00000309877 UBE2WQ96B02 151 aa15.28■□□□□ 0.04
IRF3-201ENST00000309877 IGLV10-54A0A075B6I4 117 aa15.28■□□□□ 0.04
IRF3-201ENST00000309877 IGHV3OR16-9A0A0B4J2B5 98 aa15.28■□□□□ 0.04
IRF3-201ENST00000309877 DNAH10OSP0CZ25 163 aa15.28■□□□□ 0.04
IRF3-201ENST00000309877 CHCHD10Q8WYQ3 142 aaPredicted RBP15.28■□□□□ 0.04
IRF3-201ENST00000309877 ENHOQ6UWT2 76 aa15.27■□□□□ 0.03
IRF3-201ENST00000309877 MYMXA0A1B0GTQ4 84 aa15.26■□□□□ 0.03
IRF3-201ENST00000309877 LINC00587B1AMM8 73 aa15.26■□□□□ 0.03
IRF3-201ENST00000309877 TSPEAR-AS2P59090 65 aa15.26■□□□□ 0.03
IRF3-201ENST00000309877 UPK3BQ9BT76 320 aa15.26■□□□□ 0.03
IRF3-201ENST00000309877 ZNF815PA8K554 130 aa15.25■□□□□ 0.03
IRF3-201ENST00000309877 SMIM1B2RUZ4 78 aa15.25■□□□□ 0.03
IRF3-201ENST00000309877 CD164L2Q6UWJ8 174 aa15.25■□□□□ 0.03
IRF3-201ENST00000309877 C5orf38Q86SI9 138 aa15.25■□□□□ 0.03
IRF3-201ENST00000309877 A0A087WZ39 114 aa15.24■□□□□ 0.03
IRF3-201ENST00000309877 UBE2DNLQ8IWF7 75 aa15.24■□□□□ 0.03
IRF3-201ENST00000309877 TRAV8-4A0A0B4J246 113 aa15.23■□□□□ 0.03
IRF3-201ENST00000309877 IGLV5-39A0A0G2JS06 123 aa15.23■□□□□ 0.03
IRF3-201ENST00000309877 CTAG1AP78358 180 aa15.23■□□□□ 0.03
IRF3-201ENST00000309877 MIAQ16674 131 aa15.23■□□□□ 0.03
IRF3-201ENST00000309877 C2orf91Q6ZV80 131 aa15.22■□□□□ 0.03
IRF3-201ENST00000309877 ZFAND6Q6FIF0 208 aa15.22■□□□□ 0.03
IRF3-201ENST00000309877 Q9H8V8 135 aa15.22■□□□□ 0.03
IRF3-201ENST00000309877 COX7A2LO14548 114 aa15.21■□□□□ 0.03
IRF3-201ENST00000309877 FBN3Q75N90 2809 aa15.21■□□□□ 0.02
IRF3-201ENST00000309877 GAGE12HA6NDE8 117 aa15.2■□□□□ 0.02
IRF3-201ENST00000309877 SCGB1D4Q6XE38 83 aa15.19■□□□□ 0.02
IRF3-201ENST00000309877 FOXI1Q12951 378 aa15.19■□□□□ 0.02
IRF3-201ENST00000309877 LINC01561Q8N1V8 128 aa15.19■□□□□ 0.02
IRF3-201ENST00000309877 NDUFA12Q9UI09 145 aa15.19■□□□□ 0.02
IRF3-201ENST00000309877 MALP21145 153 aa15.18■□□□□ 0.02
IRF3-201ENST00000309877 C10orf126Q8N4M7 172 aa15.17■□□□□ 0.02
IRF3-201ENST00000309877 TOMM7Q9P0U1 55 aa15.17■□□□□ 0.02
IRF3-201ENST00000309877 HIGD1BQ9P298 99 aa15.17■□□□□ 0.02
IRF3-201ENST00000309877 MUC7Q8TAX7 377 aa15.16■□□□□ 0.02
IRF3-201ENST00000309877 COX7B2Q8TF08 81 aa15.16■□□□□ 0.02
IRF3-201ENST00000309877 DYNC2H1Q8NCM8 4307 aaKnown RBP15.15■□□□□ 0.02
IRF3-201ENST00000309877 IBA57-AS1B1ANH7 110 aa15.15■□□□□ 0.02
IRF3-201ENST00000309877 C1orf43Q9BWL3 253 aa15.15■□□□□ 0.02
IRF3-201ENST00000309877 WWC2-AS2Q96NR7 200 aa15.13■□□□□ 0.01
IRF3-201ENST00000309877 Q9HAA7 133 aa15.13■□□□□ 0.01
IRF3-201ENST00000309877 IGKV2D-24A0A075B6R9 120 aa15.12■□□□□ 0.01
IRF3-201ENST00000309877 NDUFA1O15239 70 aa15.12■□□□□ 0.01
IRF3-201ENST00000309877 K7EP13 123 aa15.12■□□□□ 0.01
IRF3-201ENST00000309877 PRSS2P07478 247 aa15.12■□□□□ 0.01
IRF3-201ENST00000309877 APOMO95445 188 aa15.11■□□□□ 0.01
IRF3-201ENST00000309877 ORAOV1Q8WV07 137 aa15.11■□□□□ 0.01
IRF3-201ENST00000309877 A0A0J9YXY3 114 aa15.1■□□□□ 0.01
IRF3-201ENST00000309877 M0R143 59 aa15.1■□□□□ 0.01
IRF3-201ENST00000309877 HINT1P49773 126 aaPredicted RBP15.1■□□□□ 0.01
IRF3-201ENST00000309877 HSD52Q0P140 79 aa15.1■□□□□ 0.01
IRF3-201ENST00000309877 C6orf226Q5I0X4 101 aa15.09■□□□□ 0.01
IRF3-201ENST00000309877 BATFQ16520 125 aa15.09■□□□□ 0.01
IRF3-201ENST00000309877 KRTAP26-1Q6PEX3 210 aa15.09■□□□□ 0.01
IRF3-201ENST00000309877 Q8IZM0 81 aa15.08■□□□□ 0
IRF3-201ENST00000309877 RMI2Q96E14 147 aa15.08■□□□□ 0
IRF3-201ENST00000309877 ZNF625Q96I27 306 aaPredicted RBP15.08■□□□□ 0
IRF3-201ENST00000309877 HIST1H4GQ99525 98 aa15.08■□□□□ 0
IRF3-201ENST00000309877 DNAH7Q8WXX0 4024 aa15.08■□□□□ 0
IRF3-201ENST00000309877 HERV-K104P63124 156 aa15.07■□□□□ 0
IRF3-201ENST00000309877 SRSF9Q13242 221 aaKnown RBP eCLIP15.06■□□□□ 0
IRF3-201ENST00000309877 CFAP161Q6P656 301 aa15.06■□□□□ 0
IRF3-201ENST00000309877 SNHG12Q9BXW3 62 aa15.06■□□□□ 0
IRF3-201ENST00000309877 TAL2Q16559 108 aa15.06■□□□□ 0
IRF3-201ENST00000309877 CSMD3Q7Z407 3707 aa15.05■□□□□ 0
IRF3-201ENST00000309877 TMEM238C9JI98 176 aa15.04■□□□□ -0
IRF3-201ENST00000309877 SFTA2Q6UW10 78 aa15.04■□□□□ -0
IRF3-201ENST00000309877 EREGO14944 169 aa15.03■□□□□ -0
IRF3-201ENST00000309877 CKS1BP61024 79 aa15.03■□□□□ -0
IRF3-201ENST00000309877 CIRBPQ14011 172 aaKnown RBP15.03■□□□□ -0
IRF3-201ENST00000309877 BVES-AS1Q5T3Y7 98 aa15.03■□□□□ -0
IRF3-201ENST00000309877 SPANXB1Q9NS25 103 aaPredicted RBP15.03■□□□□ -0
IRF3-201ENST00000309877 GCSHP23434 173 aa15.03■□□□□ -0
IRF3-201ENST00000309877 SPAG11BQ08648 103 aa15.03■□□□□ -0
IRF3-201ENST00000309877 KIAA0087Q14695 138 aa15.03■□□□□ -0
IRF3-201ENST00000309877 PLECQ15149 4684 aaKnown RBP15.02■□□□□ -0
IRF3-201ENST00000309877 MEIG1Q5JSS6 88 aa15.02□□□□□ -0.01
IRF3-201ENST00000309877 TIMM17BO60830 172 aa15.01□□□□□ -0.01
IRF3-201ENST00000309877 CXCL5P42830 114 aa15.01□□□□□ -0.01
IRF3-201ENST00000309877 CEND1Q8N111 149 aa15.01□□□□□ -0.01
IRF3-201ENST00000309877 KRTAP1-5Q9BYS1 174 aa15.01□□□□□ -0.01
IRF3-201ENST00000309877 TTC32Q5I0X7 151 aa15□□□□□ -0.01
IRF3-201ENST00000309877 STARD9Q9P2P6 4700 aa15□□□□□ -0.01
IRF3-201ENST00000309877 C2orf82Q6UX34 121 aa15□□□□□ -0.01
IRF3-201ENST00000309877 COX11Q9Y6N1 276 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms