RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CARD19Q96LW7 228 aa12.45□□□□□ -0.42
PDZRN3-202ENST00000308537 GNB1LQ9BYB4 327 aa12.45□□□□□ -0.42
PDZRN3-202ENST00000308537 SPANXA1Q9NS26 97 aa12.45□□□□□ -0.42
PDZRN3-202ENST00000308537 IGLV4-69A0A075B6H9 119 aa12.44□□□□□ -0.42
PDZRN3-202ENST00000308537 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
PDZRN3-202ENST00000308537 K7EMI3 77 aa12.44□□□□□ -0.42
PDZRN3-202ENST00000308537 MRPS36P82909 103 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-202ENST00000308537 MAJINQ3KP22 176 aa12.44□□□□□ -0.42
PDZRN3-202ENST00000308537 TNXBP22105 4242 aa12.44□□□□□ -0.42
PDZRN3-202ENST00000308537 COX7A2LO14548 114 aa12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 MT-ND6P03923 174 aa12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 G0S2P27469 103 aa12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 SYCNQ0VAF6 134 aa12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 Q6ZRU5 148 aa12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 Q8N8P6 123 aa12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 NXT2Q9NPJ8 142 aaKnown RBP12.43□□□□□ -0.42
PDZRN3-202ENST00000308537 IGHV3OR16-9A0A0B4J2B5 98 aa12.42□□□□□ -0.42
PDZRN3-202ENST00000308537 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
PDZRN3-202ENST00000308537 C5orf38Q86SI9 138 aa12.42□□□□□ -0.42
PDZRN3-202ENST00000308537 STPG4Q8N801 248 aa12.42□□□□□ -0.42
PDZRN3-202ENST00000308537 HMCN2Q8NDA2 5059 aa12.42□□□□□ -0.42
PDZRN3-202ENST00000308537 ZNF561-AS1K7EIQ3 104 aa12.41□□□□□ -0.42
PDZRN3-202ENST00000308537 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-202ENST00000308537 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
PDZRN3-202ENST00000308537 MT1HL1P0DM35 61 aa12.4□□□□□ -0.42
PDZRN3-202ENST00000308537 C2orf48Q96LS8 159 aa12.39□□□□□ -0.43
PDZRN3-202ENST00000308537 PYGO1Q9Y3Y4 419 aa12.39□□□□□ -0.43
PDZRN3-202ENST00000308537 MALP21145 153 aa12.38□□□□□ -0.43
PDZRN3-202ENST00000308537 KIAA1644Q3SXP7 199 aa12.38□□□□□ -0.43
PDZRN3-202ENST00000308537 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
PDZRN3-202ENST00000308537 IGLV4-3A0A075B6K6 122 aa12.37□□□□□ -0.43
PDZRN3-202ENST00000308537 PTTG1IPP53801 180 aa12.37□□□□□ -0.43
PDZRN3-202ENST00000308537 FABP9Q0Z7S8 132 aa12.37□□□□□ -0.43
PDZRN3-202ENST00000308537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-202ENST00000308537 PRR3P79522 188 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-202ENST00000308537 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
PDZRN3-202ENST00000308537 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
PDZRN3-202ENST00000308537 CAMK2N2Q96S95 79 aa12.35□□□□□ -0.43
PDZRN3-202ENST00000308537 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-202ENST00000308537 IFITM10A6NMD0 228 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 LINC00242Q5T6M2 205 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 Q6ZN92 141 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 LINC00173Q6ZV60 143 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 OR10D4PQ8NGN7 298 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 C7orf33Q8WU49 177 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
PDZRN3-202ENST00000308537 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 APOMO95445 188 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 NPSP0C0P6 89 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.44
PDZRN3-202ENST00000308537 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
PDZRN3-202ENST00000308537 KIAA0087Q14695 138 aa12.32□□□□□ -0.44
PDZRN3-202ENST00000308537 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
PDZRN3-202ENST00000308537 ORAOV1Q8WV07 137 aa12.32□□□□□ -0.44
PDZRN3-202ENST00000308537 C2orf88Q9BSF0 95 aa12.32□□□□□ -0.44
PDZRN3-202ENST00000308537 ALKBH7Q9BT30 221 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-202ENST00000308537 TGIF2-C20orf24A0A0A6YYL0 155 aa12.31□□□□□ -0.44
PDZRN3-202ENST00000308537 GAGE2BQ13066 116 aa12.31□□□□□ -0.44
PDZRN3-202ENST00000308537 RNF151Q2KHN1 245 aa12.31□□□□□ -0.44
PDZRN3-202ENST00000308537 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
PDZRN3-202ENST00000308537 TEX43Q6ZNM6 134 aa12.31□□□□□ -0.44
PDZRN3-202ENST00000308537 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-202ENST00000308537 A0A087WZ39 114 aa12.3□□□□□ -0.44
PDZRN3-202ENST00000308537 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
PDZRN3-202ENST00000308537 UBE2D1P51668 147 aa12.3□□□□□ -0.44
PDZRN3-202ENST00000308537 AMELXQ99217 191 aa12.3□□□□□ -0.44
PDZRN3-202ENST00000308537 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
PDZRN3-202ENST00000308537 FA2HQ7L5A8 372 aa12.29□□□□□ -0.44
PDZRN3-202ENST00000308537 VCX2Q9H322 139 aa12.29□□□□□ -0.44
PDZRN3-202ENST00000308537 F8WDY8 70 aa12.27□□□□□ -0.45
PDZRN3-202ENST00000308537 UNQ6190/PRO20217Q6UXQ8 127 aa12.27□□□□□ -0.45
PDZRN3-202ENST00000308537 C6orf48Q9UBA6 75 aa12.27□□□□□ -0.45
PDZRN3-202ENST00000308537 TLX1NBP0CAT3 122 aa12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 SRSF9Q13242 221 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 C9orf116Q5BN46 136 aaPredicted RBP12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 SERTAD4-AS1Q5TG53 156 aa12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 FAM19A3Q7Z5A8 133 aa12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 TOMM6Q96B49 74 aa12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 TIMM17AQ99595 171 aa12.26□□□□□ -0.45
PDZRN3-202ENST00000308537 LINC01546A6NGU7 62 aa12.25□□□□□ -0.45
PDZRN3-202ENST00000308537 SLC7A5P1Q8MH63 180 aa12.25□□□□□ -0.45
PDZRN3-202ENST00000308537 SCGB3A1Q96QR1 104 aa12.25□□□□□ -0.45
PDZRN3-202ENST00000308537 NDUFA1O15239 70 aa12.24□□□□□ -0.45
PDZRN3-202ENST00000308537 RAB5BP61020 215 aa12.24□□□□□ -0.45
PDZRN3-202ENST00000308537 SEC11AP67812 179 aa12.24□□□□□ -0.45
PDZRN3-202ENST00000308537 RPL18AQ02543 176 aaKnown RBP12.24□□□□□ -0.45
PDZRN3-202ENST00000308537 Q6ZRP5 223 aa12.24□□□□□ -0.45
PDZRN3-202ENST00000308537 ERASQ7Z444 233 aa12.24□□□□□ -0.45
PDZRN3-202ENST00000308537 KRTAP7-1Q8IUC3 87 aa12.23□□□□□ -0.45
PDZRN3-202ENST00000308537 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
PDZRN3-202ENST00000308537 C2orf82Q6UX34 121 aa12.21□□□□□ -0.45
PDZRN3-202ENST00000308537 LINC01600Q96MT4 127 aa12.21□□□□□ -0.45
PDZRN3-202ENST00000308537 FAM168BA1KXE4 195 aa12.2□□□□□ -0.46
PDZRN3-202ENST00000308537 LINC00614P0C842 121 aa12.2□□□□□ -0.46
PDZRN3-202ENST00000308537 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms