RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
APOBEC3F-201ENST00000308521 A0A0J9YXV3 536 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 LST1O00453 97 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 PEMTQ9UBM1 199 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 IGHV1OR15-1A0A075B7D0 117 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 CCL24O00175 119 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 TRIAP1O43715 76 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 LITAFQ99732 161 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 PRO0628Q9UI54 55 aa7.51□□□□□ -1.21
APOBEC3F-201ENST00000308521 MALP21145 153 aa7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 NDUFC2-KCTD14E9PQ53 114 aa7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 H7C2G1 150 aa7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 MRPS36P82909 103 aaKnown RBP7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 CEMP1Q6PRD7 247 aaPredicted RBP7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 TMEM61Q8N0U2 210 aa7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 ICOSQ9Y6W8 199 aa7.5□□□□□ -1.21
APOBEC3F-201ENST00000308521 K7EQG2 157 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 IGHV3-30-3P0DP02 117 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 KRTAP10-3P60369 221 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 C16orf95Q9H693 158 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 TRAV12-2A0A075B6T6 113 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 CYSRT1A8MQ03 144 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 Q5XG85 94 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
APOBEC3F-201ENST00000308521 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 SNRPD3P62318 126 aaKnown RBP7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 DYNLRB2Q8TF09 96 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 KNCNA6PVL3 124 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 PROK1P58294 105 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 DAND5Q8N907 189 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 FAM104AQ969W3 186 aa7.48□□□□□ -1.21
APOBEC3F-201ENST00000308521 DEFB131AP59861 70 aa7.47□□□□□ -1.21
APOBEC3F-201ENST00000308521 DEFB114Q30KQ6 69 aa7.47□□□□□ -1.21
APOBEC3F-201ENST00000308521 MIAQ16674 131 aa7.46□□□□□ -1.21
APOBEC3F-201ENST00000308521 SERP2Q8N6R1 65 aa7.46□□□□□ -1.21
APOBEC3F-201ENST00000308521 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
APOBEC3F-201ENST00000308521 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
APOBEC3F-201ENST00000308521 TIMM17BO60830 172 aa7.46□□□□□ -1.22
APOBEC3F-201ENST00000308521 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.22
APOBEC3F-201ENST00000308521 SPINK13Q1W4C9 94 aa7.46□□□□□ -1.22
APOBEC3F-201ENST00000308521 TRAV13-1A0A0B4J241 112 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 hADV29S1A0JD25 119 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 ADAMTSL4-AS1Q5T5F5 129 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 PRM2P04554 102 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 C4orf26Q17RF5 130 aa7.45□□□□□ -1.22
APOBEC3F-201ENST00000308521 MAST4O15021 2626 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 FBN1P35555 2871 aaKnown RBP7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 PRSS2P07478 247 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 INAFM2P0DMQ5 153 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 HTN1P15515 57 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 HRCT1Q6UXD1 115 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 UPK3BQ9BT76 320 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 TRAV8-3A0A0A6YYJ7 113 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 PIK3CD-AS1Q5SR53 167 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
APOBEC3F-201ENST00000308521 NDUFC2O95298 119 aa7.43□□□□□ -1.22
APOBEC3F-201ENST00000308521 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
APOBEC3F-201ENST00000308521 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
APOBEC3F-201ENST00000308521 SPATA3Q8NHX4 192 aa7.43□□□□□ -1.22
APOBEC3F-201ENST00000308521 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
APOBEC3F-201ENST00000308521 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.42□□□□□ -1.22
APOBEC3F-201ENST00000308521 CHCHD7Q9BUK0 85 aa7.42□□□□□ -1.22
APOBEC3F-201ENST00000308521 UBE2D4Q9Y2X8 147 aa7.42□□□□□ -1.22
APOBEC3F-201ENST00000308521 MAP6D1Q9H9H5 199 aa7.42□□□□□ -1.22
APOBEC3F-201ENST00000308521 RBMY1BA6NDE4 496 aaKnown RBP7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 RBMY1EA6NEQ0 496 aaKnown RBP7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 RBMY1DP0C7P1 496 aaKnown RBP7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 A8MTW9 85 aa7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 TIRAPP58753 221 aa7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 WFDC10AQ9H1F0 79 aa7.41□□□□□ -1.22
APOBEC3F-201ENST00000308521 OXTP01178 125 aa7.4□□□□□ -1.22
APOBEC3F-201ENST00000308521 ODF3L2Q3SX64 289 aa7.4□□□□□ -1.22
APOBEC3F-201ENST00000308521 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 NDUFA1O15239 70 aa7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 PF4P02776 101 aa7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 RBMY1A1P0DJD3 496 aaKnown RBP7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 RBMY1CP0DJD4 496 aa7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 RBMY1FQ15415 496 aaKnown RBP7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 CLEC2BQ92478 149 aa7.4□□□□□ -1.23
APOBEC3F-201ENST00000308521 Q6JHZ5 121 aa7.39□□□□□ -1.23
APOBEC3F-201ENST00000308521 PRIMA1Q86XR5 153 aa7.39□□□□□ -1.23
APOBEC3F-201ENST00000308521 COL6A5A8TX70 2615 aa7.39□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 ZNF415Q09FC8 603 aa7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 A8MZ25 164 aa7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 PFN2P35080 140 aa7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 DSCR8Q96T75 97 aa7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 PKD1L1Q8TDX9 2849 aa7.38□□□□□ -1.23
APOBEC3F-201ENST00000308521 NPC2P61916 151 aa7.37□□□□□ -1.23
APOBEC3F-201ENST00000308521 XCL2Q9UBD3 114 aa7.37□□□□□ -1.23
APOBEC3F-201ENST00000308521 COX7A2LO14548 114 aa7.37□□□□□ -1.23
APOBEC3F-201ENST00000308521 RS1O15537 224 aa7.37□□□□□ -1.23
APOBEC3F-201ENST00000308521 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms