RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 J3QQQ9 107 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 SPINK8P0C7L1 97 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 MRPS16Q9Y3D3 137 aaKnown RBP11.94□□□□□ -0.5
KRT28-201ENST00000306658 SIVA1O15304 175 aa11.93□□□□□ -0.5
KRT28-201ENST00000306658 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
KRT28-201ENST00000306658 PRR34Q9NV39 138 aa11.93□□□□□ -0.5
KRT28-201ENST00000306658 LINC00588Q9Y4M8 146 aa11.93□□□□□ -0.5
KRT28-201ENST00000306658 TRAV8-3A0A0A6YYJ7 113 aa11.92□□□□□ -0.5
KRT28-201ENST00000306658 MYMXA0A1B0GTQ4 84 aa11.92□□□□□ -0.5
KRT28-201ENST00000306658 LINC01556Q5JQF7 62 aa11.92□□□□□ -0.5
KRT28-201ENST00000306658 MAPKAPK5-AS1Q8N8E1 139 aa11.92□□□□□ -0.5
KRT28-201ENST00000306658 KLK5Q9Y337 293 aaPredicted RBP11.92□□□□□ -0.5
KRT28-201ENST00000306658 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
KRT28-201ENST00000306658 ZNF815PA8K554 130 aa11.91□□□□□ -0.5
KRT28-201ENST00000306658 CRPP02741 224 aa11.91□□□□□ -0.5
KRT28-201ENST00000306658 XCL1P47992 114 aa11.91□□□□□ -0.5
KRT28-201ENST00000306658 CTAG1AP78358 180 aa11.91□□□□□ -0.5
KRT28-201ENST00000306658 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
KRT28-201ENST00000306658 APLNQ9ULZ1 77 aa11.9□□□□□ -0.5
KRT28-201ENST00000306658 A0A087WZ39 114 aa11.89□□□□□ -0.51
KRT28-201ENST00000306658 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
KRT28-201ENST00000306658 SMIM1B2RUZ4 78 aa11.89□□□□□ -0.51
KRT28-201ENST00000306658 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
KRT28-201ENST00000306658 CD164L2Q6UWJ8 174 aa11.89□□□□□ -0.51
KRT28-201ENST00000306658 C2orf91Q6ZV80 131 aa11.89□□□□□ -0.51
KRT28-201ENST00000306658 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
KRT28-201ENST00000306658 ENHOQ6UWT2 76 aa11.88□□□□□ -0.51
KRT28-201ENST00000306658 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
KRT28-201ENST00000306658 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
KRT28-201ENST00000306658 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
KRT28-201ENST00000306658 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
KRT28-201ENST00000306658 HIGD1BQ9P298 99 aa11.87□□□□□ -0.51
KRT28-201ENST00000306658 MIAQ16674 131 aa11.87□□□□□ -0.51
KRT28-201ENST00000306658 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
KRT28-201ENST00000306658 SCGB1D4Q6XE38 83 aa11.86□□□□□ -0.51
KRT28-201ENST00000306658 LINC01561Q8N1V8 128 aa11.86□□□□□ -0.51
KRT28-201ENST00000306658 FBN3Q75N90 2809 aa11.86□□□□□ -0.51
KRT28-201ENST00000306658 COX7A2LO14548 114 aa11.84□□□□□ -0.51
KRT28-201ENST00000306658 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
KRT28-201ENST00000306658 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
KRT28-201ENST00000306658 M0R143 59 aa11.83□□□□□ -0.52
KRT28-201ENST00000306658 UBE2DNLQ8IWF7 75 aa11.83□□□□□ -0.52
KRT28-201ENST00000306658 Q9H8V8 135 aa11.83□□□□□ -0.52
KRT28-201ENST00000306658 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
KRT28-201ENST00000306658 FOXI1Q12951 378 aa11.82□□□□□ -0.52
KRT28-201ENST00000306658 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
KRT28-201ENST00000306658 MALP21145 153 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 C10orf126Q8N4M7 172 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 K7EP13 123 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 NDUFA1O15239 70 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 HSD52Q0P140 79 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 TOMM7Q9P0U1 55 aa11.81□□□□□ -0.52
KRT28-201ENST00000306658 HINT1P49773 126 aaPredicted RBP11.8□□□□□ -0.52
KRT28-201ENST00000306658 DNAH7Q8WXX0 4024 aa11.79□□□□□ -0.52
KRT28-201ENST00000306658 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
KRT28-201ENST00000306658 C1orf43Q9BWL3 253 aa11.79□□□□□ -0.52
KRT28-201ENST00000306658 SNHG12Q9BXW3 62 aa11.79□□□□□ -0.52
KRT28-201ENST00000306658 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
KRT28-201ENST00000306658 APOMO95445 188 aa11.78□□□□□ -0.52
KRT28-201ENST00000306658 TAL2Q16559 108 aa11.78□□□□□ -0.52
KRT28-201ENST00000306658 PRSS2P07478 247 aa11.78□□□□□ -0.52
KRT28-201ENST00000306658 BATFQ16520 125 aa11.78□□□□□ -0.52
KRT28-201ENST00000306658 HIST1H4GQ99525 98 aa11.78□□□□□ -0.52
KRT28-201ENST00000306658 HERV-K104P63124 156 aa11.77□□□□□ -0.53
KRT28-201ENST00000306658 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.53
KRT28-201ENST00000306658 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.53
KRT28-201ENST00000306658 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
KRT28-201ENST00000306658 Q8IZM0 81 aa11.77□□□□□ -0.53
KRT28-201ENST00000306658 BVES-AS1Q5T3Y7 98 aa11.76□□□□□ -0.53
KRT28-201ENST00000306658 MUC7Q8TAX7 377 aa11.76□□□□□ -0.53
KRT28-201ENST00000306658 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
KRT28-201ENST00000306658 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
KRT28-201ENST00000306658 CSMD3Q7Z407 3707 aa11.76□□□□□ -0.53
KRT28-201ENST00000306658 IGKV2D-24A0A075B6R9 120 aa11.75□□□□□ -0.53
KRT28-201ENST00000306658 TMEM238C9JI98 176 aa11.75□□□□□ -0.53
KRT28-201ENST00000306658 EREGO14944 169 aa11.75□□□□□ -0.53
KRT28-201ENST00000306658 SPANXB1Q9NS25 103 aaPredicted RBP11.75□□□□□ -0.53
KRT28-201ENST00000306658 CIRBPQ14011 172 aaKnown RBP11.75□□□□□ -0.53
KRT28-201ENST00000306658 KRTAP26-1Q6PEX3 210 aa11.75□□□□□ -0.53
KRT28-201ENST00000306658 Q9HAA7 133 aa11.75□□□□□ -0.53
KRT28-201ENST00000306658 RMI2Q96E14 147 aa11.74□□□□□ -0.53
KRT28-201ENST00000306658 TIMM17BO60830 172 aa11.73□□□□□ -0.53
KRT28-201ENST00000306658 GCSHP23434 173 aa11.73□□□□□ -0.53
KRT28-201ENST00000306658 LBHQ53QV2 105 aaPredicted RBP11.73□□□□□ -0.53
KRT28-201ENST00000306658 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
KRT28-201ENST00000306658 CEND1Q8N111 149 aa11.73□□□□□ -0.53
KRT28-201ENST00000306658 WWC2-AS2Q96NR7 200 aa11.73□□□□□ -0.53
KRT28-201ENST00000306658 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
KRT28-201ENST00000306658 TM2D2Q9BX73 214 aa11.72□□□□□ -0.53
KRT28-201ENST00000306658 TGP01266 2768 aa11.72□□□□□ -0.53
KRT28-201ENST00000306658 CXCL5P42830 114 aa11.71□□□□□ -0.53
KRT28-201ENST00000306658 CKS1BP61024 79 aa11.71□□□□□ -0.53
KRT28-201ENST00000306658 KIAA0087Q14695 138 aa11.71□□□□□ -0.54
KRT28-201ENST00000306658 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.54
KRT28-201ENST00000306658 Q6ZVH6 145 aa11.71□□□□□ -0.54
KRT28-201ENST00000306658 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
KRT28-201ENST00000306658 LITAFQ99732 161 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms