RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 CDKN2A-AS1Q9UH64 79 aa13.05□□□□□ -0.32
T-201ENST00000296946 IGLV5-45A0A087WSX0 123 aa13.05□□□□□ -0.32
T-201ENST00000296946 CXCL5P42830 114 aa13.05□□□□□ -0.32
T-201ENST00000296946 KRTAP10-3P60369 221 aa13.05□□□□□ -0.32
T-201ENST00000296946 A0A1W2PRX2 142 aa13.04□□□□□ -0.32
T-201ENST00000296946 NDUFA7O95182 113 aa13.04□□□□□ -0.32
T-201ENST00000296946 PROK1P58294 105 aa13.04□□□□□ -0.32
T-201ENST00000296946 PIK3CD-AS1Q5SR53 167 aa13.04□□□□□ -0.32
T-201ENST00000296946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.04□□□□□ -0.32
T-201ENST00000296946 IGKV2-29A2NJV5 120 aaPredicted RBP13.04□□□□□ -0.32
T-201ENST00000296946 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
T-201ENST00000296946 C3orf56Q8N813 242 aa13.03□□□□□ -0.32
T-201ENST00000296946 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
T-201ENST00000296946 DAZ2Q13117 558 aaKnown RBP13.03□□□□□ -0.32
T-201ENST00000296946 DAZ4Q86SG3 579 aaKnown RBP13.03□□□□□ -0.32
T-201ENST00000296946 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
T-201ENST00000296946 DAZ3Q9NR90 486 aaKnown RBP13.03□□□□□ -0.32
T-201ENST00000296946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.32
T-201ENST00000296946 SMCR5Q8TEV8 140 aa13.02□□□□□ -0.32
T-201ENST00000296946 BAALC-AS2P0C853 105 aa13.02□□□□□ -0.33
T-201ENST00000296946 HTN1P15515 57 aa13.02□□□□□ -0.33
T-201ENST00000296946 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
T-201ENST00000296946 LINC00467Q9BRT7 94 aa13.02□□□□□ -0.33
T-201ENST00000296946 Q9H8V8 135 aa13.02□□□□□ -0.33
T-201ENST00000296946 INAFM2P0DMQ5 153 aa13.01□□□□□ -0.33
T-201ENST00000296946 HERVK_113P63121 156 aa13.01□□□□□ -0.33
T-201ENST00000296946 DGAT2L7PQ6IED9 249 aa13.01□□□□□ -0.33
T-201ENST00000296946 HOXD3P31249 432 aaPredicted RBP13□□□□□ -0.33
T-201ENST00000296946 SLURP1P55000 103 aa13□□□□□ -0.33
T-201ENST00000296946 IGLV5-39A0A0G2JS06 123 aa13□□□□□ -0.33
T-201ENST00000296946 SYNJ2BPP57105 145 aa13□□□□□ -0.33
T-201ENST00000296946 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
T-201ENST00000296946 C5orf38Q86SI9 138 aa12.99□□□□□ -0.33
T-201ENST00000296946 C4orf3Q8WVX3 66 aa12.99□□□□□ -0.33
T-201ENST00000296946 KNCNA6PVL3 124 aa12.98□□□□□ -0.33
T-201ENST00000296946 ZNF415Q09FC8 603 aa12.98□□□□□ -0.33
T-201ENST00000296946 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
T-201ENST00000296946 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
T-201ENST00000296946 LINC00694P0DN24 101 aa12.98□□□□□ -0.33
T-201ENST00000296946 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
T-201ENST00000296946 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
T-201ENST00000296946 RBMY1CP0DJD4 496 aa12.97□□□□□ -0.33
T-201ENST00000296946 RBMY1FQ15415 496 aaKnown RBP12.97□□□□□ -0.33
T-201ENST00000296946 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
T-201ENST00000296946 Q6ZSN1 163 aa12.97□□□□□ -0.33
T-201ENST00000296946 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
T-201ENST00000296946 IGHV3-53P01767 116 aa12.96□□□□□ -0.33
T-201ENST00000296946 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.33
T-201ENST00000296946 Q9UF83 564 aa12.96□□□□□ -0.33
T-201ENST00000296946 COX7CP15954 63 aa12.96□□□□□ -0.34
T-201ENST00000296946 IGHV3-38A0A0C4DH36 116 aa12.95□□□□□ -0.34
T-201ENST00000296946 A0A0U1RRA0 63 aa12.95□□□□□ -0.34
T-201ENST00000296946 COX6A2Q02221 97 aa12.95□□□□□ -0.34
T-201ENST00000296946 PF4P02776 101 aa12.94□□□□□ -0.34
T-201ENST00000296946 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
T-201ENST00000296946 SOSTDC1Q6X4U4 206 aa12.94□□□□□ -0.34
T-201ENST00000296946 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
T-201ENST00000296946 FAM19A3Q7Z5A8 133 aa12.93□□□□□ -0.34
T-201ENST00000296946 IGHV3OR16-12A0A075B7B8 117 aa12.93□□□□□ -0.34
T-201ENST00000296946 ATOX1O00244 68 aa12.93□□□□□ -0.34
T-201ENST00000296946 GAGE2AQ6NT46 116 aa12.93□□□□□ -0.34
T-201ENST00000296946 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
T-201ENST00000296946 TRAV13-2A0A0B4J235 113 aa12.92□□□□□ -0.34
T-201ENST00000296946 A0A1B0GX51 115 aa12.92□□□□□ -0.34
T-201ENST00000296946 SMIM1B2RUZ4 78 aa12.92□□□□□ -0.34
T-201ENST00000296946 CCL24O00175 119 aa12.92□□□□□ -0.34
T-201ENST00000296946 MALP21145 153 aa12.91□□□□□ -0.34
T-201ENST00000296946 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
T-201ENST00000296946 J3KT08 172 aa12.91□□□□□ -0.34
T-201ENST00000296946 CRYGAP11844 174 aa12.91□□□□□ -0.34
T-201ENST00000296946 C22orf24Q9Y442 160 aa12.91□□□□□ -0.34
T-201ENST00000296946 A8MTW9 85 aa12.9□□□□□ -0.34
T-201ENST00000296946 FAM218AQ96MZ4 157 aa12.9□□□□□ -0.34
T-201ENST00000296946 RPL28P46779 137 aaKnown RBP12.89□□□□□ -0.35
T-201ENST00000296946 HIST1H4AP62805 103 aaKnown RBP12.89□□□□□ -0.35
T-201ENST00000296946 CSDC2Q9Y534 153 aaKnown RBP12.89□□□□□ -0.35
T-201ENST00000296946 SORL1Q92673 2214 aa12.89□□□□□ -0.35
T-201ENST00000296946 DEFB131AP59861 70 aa12.89□□□□□ -0.35
T-201ENST00000296946 RS1O15537 224 aa12.88□□□□□ -0.35
T-201ENST00000296946 C2orf48Q96LS8 159 aa12.88□□□□□ -0.35
T-201ENST00000296946 DNAL4O96015 105 aa12.87□□□□□ -0.35
T-201ENST00000296946 CRPP02741 224 aa12.87□□□□□ -0.35
T-201ENST00000296946 PRM2P04554 102 aa12.87□□□□□ -0.35
T-201ENST00000296946 RPS28P62857 69 aaKnown RBP12.87□□□□□ -0.35
T-201ENST00000296946 SPATA3Q8NHX4 192 aa12.87□□□□□ -0.35
T-201ENST00000296946 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
T-201ENST00000296946 C11orf72Q8NBR9 251 aa12.86□□□□□ -0.35
T-201ENST00000296946 Q9HAA7 133 aa12.86□□□□□ -0.35
T-201ENST00000296946 C5orf47Q569G3 176 aa12.84□□□□□ -0.35
T-201ENST00000296946 PKD1L1Q8TDX9 2849 aa12.84□□□□□ -0.35
T-201ENST00000296946 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
T-201ENST00000296946 LOC107984640A0A0U1RRK4 108 aa12.83□□□□□ -0.35
T-201ENST00000296946 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.35
T-201ENST00000296946 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.35
T-201ENST00000296946 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.35
T-201ENST00000296946 RPL18AQ02543 176 aaKnown RBP12.83□□□□□ -0.35
T-201ENST00000296946 F5H768 121 aa12.83□□□□□ -0.36
T-201ENST00000296946 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
T-201ENST00000296946 H0YGX0 51 aa12.82□□□□□ -0.36
T-201ENST00000296946 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms