RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 Q8N2B8 174 aa9.64□□□□□ -0.87
TNFRSF21-201ENST00000296861 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
TNFRSF21-201ENST00000296861 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 H3BT86 120 aa9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 SLPIP03973 132 aa9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 HTN3P15516 51 aa9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
TNFRSF21-201ENST00000296861 XCL1P47992 114 aa9.61□□□□□ -0.87
TNFRSF21-201ENST00000296861 HERVK_113P63121 156 aa9.61□□□□□ -0.87
TNFRSF21-201ENST00000296861 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
TNFRSF21-201ENST00000296861 F8P00451 2351 aa9.6□□□□□ -0.87
TNFRSF21-201ENST00000296861 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
TNFRSF21-201ENST00000296861 DEFB4AO15263 64 aa9.6□□□□□ -0.87
TNFRSF21-201ENST00000296861 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
TNFRSF21-201ENST00000296861 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
TNFRSF21-201ENST00000296861 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
TNFRSF21-201ENST00000296861 LST1O00453 97 aa9.59□□□□□ -0.87
TNFRSF21-201ENST00000296861 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
TNFRSF21-201ENST00000296861 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
TNFRSF21-201ENST00000296861 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 ZNF843Q8N446 348 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 LITAFQ99732 161 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 ATRQ13535 2644 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 TMEM89A2RUT3 159 aa9.58□□□□□ -0.88
TNFRSF21-201ENST00000296861 HIST1H4AP62805 103 aaKnown RBP9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 C14orf132Q9NPU4 83 aa9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 K7EQD1 137 aa9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 CCL24O00175 119 aa9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 KLK9Q2XQG4 91 aa9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 ODF3L2Q3SX64 289 aa9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 SOSTDC1Q6X4U4 206 aa9.57□□□□□ -0.88
TNFRSF21-201ENST00000296861 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF21-201ENST00000296861 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
TNFRSF21-201ENST00000296861 SETXQ7Z333 2677 aaKnown RBP9.56□□□□□ -0.88
TNFRSF21-201ENST00000296861 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 UBR5O95071 2799 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 LECT2O14960 151 aa9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 WFDC11Q8NEX6 87 aa9.55□□□□□ -0.88
TNFRSF21-201ENST00000296861 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
TNFRSF21-201ENST00000296861 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
TNFRSF21-201ENST00000296861 NDUFA1O15239 70 aa9.54□□□□□ -0.88
TNFRSF21-201ENST00000296861 Q6YL49 198 aa9.54□□□□□ -0.88
TNFRSF21-201ENST00000296861 COX7A2LO14548 114 aa9.54□□□□□ -0.88
TNFRSF21-201ENST00000296861 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
TNFRSF21-201ENST00000296861 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
TNFRSF21-201ENST00000296861 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
TNFRSF21-201ENST00000296861 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
TNFRSF21-201ENST00000296861 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
TNFRSF21-201ENST00000296861 DSCR9P59020 149 aa9.53□□□□□ -0.88
TNFRSF21-201ENST00000296861 Q6Q795 121 aa9.53□□□□□ -0.88
TNFRSF21-201ENST00000296861 LINC00526Q96FQ7 95 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 NCR3O14931 201 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 C11orf72Q8NBR9 251 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
TNFRSF21-201ENST00000296861 KLK5Q9Y337 293 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF21-201ENST00000296861 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
TNFRSF21-201ENST00000296861 TIRAPP58753 221 aa9.5□□□□□ -0.89
TNFRSF21-201ENST00000296861 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
TNFRSF21-201ENST00000296861 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
TNFRSF21-201ENST00000296861 UNC79Q9P2D8 2635 aa9.49□□□□□ -0.89
TNFRSF21-201ENST00000296861 PF4P02776 101 aa9.49□□□□□ -0.89
TNFRSF21-201ENST00000296861 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
TNFRSF21-201ENST00000296861 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
TNFRSF21-201ENST00000296861 A0A087WVE0 104 aa9.48□□□□□ -0.89
TNFRSF21-201ENST00000296861 A0A087WYN8 130 aa9.48□□□□□ -0.89
TNFRSF21-201ENST00000296861 GYPEP15421 78 aa9.48□□□□□ -0.89
TNFRSF21-201ENST00000296861 MALP21145 153 aa9.48□□□□□ -0.89
TNFRSF21-201ENST00000296861 C4orf3Q8WVX3 66 aa9.48□□□□□ -0.89
TNFRSF21-201ENST00000296861 J3QLI3 93 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 ACYP1P07311 99 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 LINC00643Q86TS7 51 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 LINC00337Q8N6G1 96 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 WFDC9Q8NEX5 89 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
TNFRSF21-201ENST00000296861 DNAJC9-AS1A6NH13 148 aa9.46□□□□□ -0.89
TNFRSF21-201ENST00000296861 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.89
TNFRSF21-201ENST00000296861 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
TNFRSF21-201ENST00000296861 TEP1Q99973 2627 aaKnown RBP9.45□□□□□ -0.9
TNFRSF21-201ENST00000296861 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
TNFRSF21-201ENST00000296861 CCL18P55774 89 aa9.45□□□□□ -0.9
TNFRSF21-201ENST00000296861 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF21-201ENST00000296861 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
TNFRSF21-201ENST00000296861 TIMM17BO60830 172 aa9.44□□□□□ -0.9
TNFRSF21-201ENST00000296861 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
TNFRSF21-201ENST00000296861 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
TNFRSF21-201ENST00000296861 LINC00482Q8N8I6 264 aa9.43□□□□□ -0.9
TNFRSF21-201ENST00000296861 AKAP9Q99996 3911 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms