RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 LINC00694P0DN24 101 aa3.46□□□□□ -1.85
PPP1R9A-201ENST00000289495 GAGE6Q13070 117 aa3.46□□□□□ -1.85
PPP1R9A-201ENST00000289495 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.85
PPP1R9A-201ENST00000289495 ICOSQ9Y6W8 199 aa3.46□□□□□ -1.85
PPP1R9A-201ENST00000289495 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 LINC00242Q5T6M2 205 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 TOMM7Q9P0U1 55 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 DEFB130BP0DP73 79 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 DEFB130AP0DP74 79 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 HERV-K104P63124 156 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 LINC01620Q4KN68 170 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 ANKRD29Q8N6D5 301 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 DAND5Q8N907 189 aa3.46□□□□□ -1.86
PPP1R9A-201ENST00000289495 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 H7C423 109 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 LITAFQ99732 161 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 LOC100131303A0A0U1RQF7 123 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 SMIM1B2RUZ4 78 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 TRIAP1O43715 76 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 INSL3P51460 131 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 COX6A2Q02221 97 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 ADAMTSL4-AS1Q5T5F5 129 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 SPATA25Q9BR10 227 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 CDC42SE2Q9NRR3 84 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 NBEAL1Q6ZS30 2694 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 TMEM262E9PQX1 116 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 CRLF1O75462 422 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 OVOL2Q9BRP0 275 aa3.45□□□□□ -1.86
PPP1R9A-201ENST00000289495 SCGB1A1P11684 91 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 C2orf82Q6UX34 121 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 MXRA5Q9NR99 2828 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 C9orf66Q5T8R8 295 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 SBSPONQ8IVN8 264 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 NTN5Q8WTR8 489 aaPredicted RBP3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 APCP25054 2843 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 LINC00308Q8TCZ7 52 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 UBE2WQ96B02 151 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 RNF183Q96D59 192 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 C19orf73Q9NVV2 129 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 CRPP02741 224 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 LINC00482Q8N8I6 264 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 SMR3AQ99954 134 aa3.44□□□□□ -1.86
PPP1R9A-201ENST00000289495 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 H3BT86 120 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 EIF4EBP3O60516 100 aaPredicted RBP3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 GYPEP15421 78 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 FAM19A3Q7Z5A8 133 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 M0QXV9 152 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 LY6G6DO95868 133 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 LINC00158P58513 81 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 FHL2Q14192 279 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 CSNK1G2-AS1Q8NCQ2 148 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 CLEC2BQ92478 149 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 SMIM9A6NGZ8 99 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 APOC4P55056 127 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 KIR2DL5BQ8NHK3 375 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 CARD19Q96LW7 228 aa3.43□□□□□ -1.86
PPP1R9A-201ENST00000289495 TRAV8-4A0A0B4J246 113 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 SS18Q15532 418 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 PAX4O43316 350 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 ITPR2Q14571 2701 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 TRAV13-2A0A0B4J235 113 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 A0A1B0GV72 72 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 F5H768 121 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 LST1O00453 97 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 C5orf38Q86SI9 138 aa3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 C11orf68Q9H3H3 251 aaKnown RBP3.42□□□□□ -1.86
PPP1R9A-201ENST00000289495 IGLV4-60A0A075B6I1 120 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 LYRM9A8MSI8 78 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 INAFM1C9JVW0 142 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 DAD1P61803 113 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 DEFB135Q30KP9 77 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 VPS13CQ709C8 3753 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 A0A096LPF7 62 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 COX7A2LO14548 114 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 SNCGO76070 127 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 C6orf226Q5I0X4 101 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 FAM222AQ5U5X8 452 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 XCL1P47992 114 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 CLPSL2Q6UWE3 100 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 SND1-IT1Q9HBX3 110 aa3.41□□□□□ -1.86
PPP1R9A-201ENST00000289495 PFN2P35080 140 aa3.4□□□□□ -1.86
PPP1R9A-201ENST00000289495 CFAP161Q6P656 301 aa3.4□□□□□ -1.86
PPP1R9A-201ENST00000289495 ZFHX3Q15911 3703 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 DNAL4O96015 105 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 HTN3P15516 51 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 KRTAP10-3P60369 221 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms