RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
SHROOM4-201ENST00000289292 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.14□□□□□ -0.63
SHROOM4-201ENST00000289292 C9orf116Q5BN46 136 aaPredicted RBP11.14□□□□□ -0.63
SHROOM4-201ENST00000289292 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
SHROOM4-201ENST00000289292 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
SHROOM4-201ENST00000289292 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
SHROOM4-201ENST00000289292 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
SHROOM4-201ENST00000289292 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
SHROOM4-201ENST00000289292 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
SHROOM4-201ENST00000289292 NDUFC1O43677 76 aa11.13□□□□□ -0.63
SHROOM4-201ENST00000289292 IGLV2-18A0A075B6J9 118 aa11.12□□□□□ -0.63
SHROOM4-201ENST00000289292 CD164L2Q6UWJ8 174 aa11.12□□□□□ -0.63
SHROOM4-201ENST00000289292 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
SHROOM4-201ENST00000289292 SEC61GP60059 68 aa11.11□□□□□ -0.63
SHROOM4-201ENST00000289292 A6NED7 52 aa11.11□□□□□ -0.63
SHROOM4-201ENST00000289292 AVPP01185 164 aa11.11□□□□□ -0.63
SHROOM4-201ENST00000289292 CDIP1Q9H305 208 aa11.11□□□□□ -0.63
SHROOM4-201ENST00000289292 A0A087WZ39 114 aa11.1□□□□□ -0.63
SHROOM4-201ENST00000289292 SMIM1B2RUZ4 78 aa11.1□□□□□ -0.63
SHROOM4-201ENST00000289292 INAFM1C9JVW0 142 aa11.1□□□□□ -0.63
SHROOM4-201ENST00000289292 MIFP14174 115 aa11.1□□□□□ -0.63
SHROOM4-201ENST00000289292 C10orf142B7Z368 130 aa11.1□□□□□ -0.63
SHROOM4-201ENST00000289292 Q6ZSN1 163 aa11.1□□□□□ -0.63
SHROOM4-201ENST00000289292 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
SHROOM4-201ENST00000289292 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-201ENST00000289292 SMIM26A0A096LP01 95 aa11.07□□□□□ -0.64
SHROOM4-201ENST00000289292 CSDC2Q9Y534 153 aaKnown RBP11.07□□□□□ -0.64
SHROOM4-201ENST00000289292 SERP1Q9Y6X1 66 aa11.07□□□□□ -0.64
SHROOM4-201ENST00000289292 NAV3Q8IVL0 2385 aa11.07□□□□□ -0.64
SHROOM4-201ENST00000289292 IGLV4-60A0A075B6I1 120 aa11.07□□□□□ -0.64
SHROOM4-201ENST00000289292 EXPH5Q8NEV8 1989 aa11.06□□□□□ -0.64
SHROOM4-201ENST00000289292 M0R378 163 aa11.06□□□□□ -0.64
SHROOM4-201ENST00000289292 ZNF73O43830 326 aaPredicted RBP11.06□□□□□ -0.64
SHROOM4-201ENST00000289292 MRGPRG-AS1Q2M3A8 158 aa11.06□□□□□ -0.64
SHROOM4-201ENST00000289292 ZNF843Q8N446 348 aa11.05□□□□□ -0.64
SHROOM4-201ENST00000289292 TRAV7A0A075B6U4 112 aa11.05□□□□□ -0.64
SHROOM4-201ENST00000289292 CASC2Q6XLA1 102 aa11.05□□□□□ -0.64
SHROOM4-201ENST00000289292 CYSRT1A8MQ03 144 aa11.04□□□□□ -0.64
SHROOM4-201ENST00000289292 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
SHROOM4-201ENST00000289292 Q8N814 137 aa11.04□□□□□ -0.64
SHROOM4-201ENST00000289292 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
SHROOM4-201ENST00000289292 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
SHROOM4-201ENST00000289292 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
SHROOM4-201ENST00000289292 Q8IZM0 81 aa11.03□□□□□ -0.64
SHROOM4-201ENST00000289292 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
SHROOM4-201ENST00000289292 KPRPQ5T749 579 aaPredicted RBP11.03□□□□□ -0.64
SHROOM4-201ENST00000289292 IGHV4-30-4P0DP06 118 aa11.02□□□□□ -0.65
SHROOM4-201ENST00000289292 HILS1P60008 231 aa11.02□□□□□ -0.65
SHROOM4-201ENST00000289292 COX17Q14061 63 aa11.01□□□□□ -0.65
SHROOM4-201ENST00000289292 AMELXQ99217 191 aa11.01□□□□□ -0.65
SHROOM4-201ENST00000289292 ODF3L2Q3SX64 289 aa11.01□□□□□ -0.65
SHROOM4-201ENST00000289292 RPL28P46779 137 aaKnown RBP11.01□□□□□ -0.65
SHROOM4-201ENST00000289292 LELP1Q5T871 98 aa11.01□□□□□ -0.65
SHROOM4-201ENST00000289292 PLA2G2AP14555 144 aa11□□□□□ -0.65
SHROOM4-201ENST00000289292 SPINK6Q6UWN8 80 aa11□□□□□ -0.65
SHROOM4-201ENST00000289292 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
SHROOM4-201ENST00000289292 PRO3102Q9H379 93 aa11□□□□□ -0.65
SHROOM4-201ENST00000289292 C6orf223Q8N319 242 aa11□□□□□ -0.65
SHROOM4-201ENST00000289292 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
SHROOM4-201ENST00000289292 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
SHROOM4-201ENST00000289292 A8MTW9 85 aa10.99□□□□□ -0.65
SHROOM4-201ENST00000289292 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
SHROOM4-201ENST00000289292 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
SHROOM4-201ENST00000289292 PSPHP1O15172 72 aa10.98□□□□□ -0.65
SHROOM4-201ENST00000289292 PRR15LQ9BU68 103 aa10.98□□□□□ -0.65
SHROOM4-201ENST00000289292 IGLV9-49A0A0B4J1Y8 123 aa10.98□□□□□ -0.65
SHROOM4-201ENST00000289292 SMCPP49901 116 aaPredicted RBP10.97□□□□□ -0.65
SHROOM4-201ENST00000289292 C14orf177Q52M58 125 aa10.97□□□□□ -0.65
SHROOM4-201ENST00000289292 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
SHROOM4-201ENST00000289292 PRYO14603 147 aa10.97□□□□□ -0.65
SHROOM4-201ENST00000289292 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.97□□□□□ -0.65
SHROOM4-201ENST00000289292 LINC00846Q9NV44 126 aa10.97□□□□□ -0.65
SHROOM4-201ENST00000289292 PMAIP1Q13794 54 aa10.96□□□□□ -0.65
SHROOM4-201ENST00000289292 ADAMTS20P59510 1910 aa10.96□□□□□ -0.65
SHROOM4-201ENST00000289292 A0A1W2PPR1 153 aa10.96□□□□□ -0.65
SHROOM4-201ENST00000289292 LY6G6DO95868 133 aa10.96□□□□□ -0.66
SHROOM4-201ENST00000289292 M0R2N4 97 aa10.96□□□□□ -0.66
SHROOM4-201ENST00000289292 Q8N3U1 123 aa10.95□□□□□ -0.66
SHROOM4-201ENST00000289292 RETNQ9HD89 108 aa10.94□□□□□ -0.66
SHROOM4-201ENST00000289292 ANKHD1Q8IWZ3 2542 aaKnown RBP10.94□□□□□ -0.66
SHROOM4-201ENST00000289292 FHL2Q14192 279 aa10.94□□□□□ -0.66
SHROOM4-201ENST00000289292 FAM208BQ5VWN6 2430 aa10.93□□□□□ -0.66
SHROOM4-201ENST00000289292 SMR3AQ99954 134 aa10.93□□□□□ -0.66
SHROOM4-201ENST00000289292 LINC00208Q96KT6 92 aa10.91□□□□□ -0.66
SHROOM4-201ENST00000289292 PTPRQQ9UMZ3 2332 aa10.91□□□□□ -0.66
SHROOM4-201ENST00000289292 KRTAP10-9P60411 292 aa10.91□□□□□ -0.66
SHROOM4-201ENST00000289292 DEFB116Q30KQ4 102 aa10.9□□□□□ -0.66
SHROOM4-201ENST00000289292 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.67
SHROOM4-201ENST00000289292 LINC01546A6NGU7 62 aa10.9□□□□□ -0.67
SHROOM4-201ENST00000289292 C4orf26Q17RF5 130 aa10.9□□□□□ -0.67
SHROOM4-201ENST00000289292 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.67
SHROOM4-201ENST00000289292 PLAC8L1A1L4L8 177 aa10.89□□□□□ -0.67
SHROOM4-201ENST00000289292 Q8N9L7 120 aa10.89□□□□□ -0.67
SHROOM4-201ENST00000289292 KIR2DL5BQ8NHK3 375 aa10.89□□□□□ -0.67
SHROOM4-201ENST00000289292 TRAV10A0A0B4J240 114 aa10.88□□□□□ -0.67
SHROOM4-201ENST00000289292 TRBV7-6A0A0J9YX20 115 aa10.88□□□□□ -0.67
SHROOM4-201ENST00000289292 PRO0461Q9UI25 63 aa10.88□□□□□ -0.67
SHROOM4-201ENST00000289292 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
SHROOM4-201ENST00000289292 OXLD1Q5BKU9 147 aa10.88□□□□□ -0.67
SHROOM4-201ENST00000289292 SORL1Q92673 2214 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms