RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OXTP01178 125 aa9.08□□□□□ -0.96
HMGN3-201ENST00000275036 RAB5AP20339 215 aa9.08□□□□□ -0.96
HMGN3-201ENST00000275036 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
HMGN3-201ENST00000275036 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
HMGN3-201ENST00000275036 IGHV3OR16-9A0A0B4J2B5 98 aa9.07□□□□□ -0.96
HMGN3-201ENST00000275036 STPG4Q8N801 248 aa9.07□□□□□ -0.96
HMGN3-201ENST00000275036 Q8N8P6 123 aa9.07□□□□□ -0.96
HMGN3-201ENST00000275036 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
HMGN3-201ENST00000275036 IFITM10A6NMD0 228 aa9.06□□□□□ -0.96
HMGN3-201ENST00000275036 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
HMGN3-201ENST00000275036 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
HMGN3-201ENST00000275036 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
HMGN3-201ENST00000275036 CAMK2N2Q96S95 79 aa9.05□□□□□ -0.96
HMGN3-201ENST00000275036 SEC11CQ9BY50 192 aa9.05□□□□□ -0.96
HMGN3-201ENST00000275036 CTDSP1Q9GZU7 261 aa9.05□□□□□ -0.96
HMGN3-201ENST00000275036 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
HMGN3-201ENST00000275036 TNXBP22105 4242 aa9.04□□□□□ -0.96
HMGN3-201ENST00000275036 APOMO95445 188 aa9.04□□□□□ -0.96
HMGN3-201ENST00000275036 SPAG11BQ08648 103 aa9.04□□□□□ -0.96
HMGN3-201ENST00000275036 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
HMGN3-201ENST00000275036 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
HMGN3-201ENST00000275036 C2orf48Q96LS8 159 aa9.04□□□□□ -0.96
HMGN3-201ENST00000275036 MT1HL1P0DM35 61 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 LINC00242Q5T6M2 205 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 LINC00173Q6ZV60 143 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 OR10D4PQ8NGN7 298 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 ORAOV1Q8WV07 137 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 TMEM141Q96I45 108 aa9.03□□□□□ -0.96
HMGN3-201ENST00000275036 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 LOC107984640A0A0U1RRK4 108 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.02□□□□□ -0.97
HMGN3-201ENST00000275036 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.97
HMGN3-201ENST00000275036 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
HMGN3-201ENST00000275036 ORMDL2Q53FV1 153 aa9.01□□□□□ -0.97
HMGN3-201ENST00000275036 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
HMGN3-201ENST00000275036 A0A087WZ39 114 aa9□□□□□ -0.97
HMGN3-201ENST00000275036 IGIPA6NJ69 53 aa9□□□□□ -0.97
HMGN3-201ENST00000275036 UBE2D1P51668 147 aa9□□□□□ -0.97
HMGN3-201ENST00000275036 C10orf25Q5T742 122 aa9□□□□□ -0.97
HMGN3-201ENST00000275036 TEX43Q6ZNM6 134 aa9□□□□□ -0.97
HMGN3-201ENST00000275036 AMELXQ99217 191 aa9□□□□□ -0.97
HMGN3-201ENST00000275036 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
HMGN3-201ENST00000275036 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
HMGN3-201ENST00000275036 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
HMGN3-201ENST00000275036 K7EMI3 77 aa8.99□□□□□ -0.97
HMGN3-201ENST00000275036 PRR3P79522 188 aaKnown RBP8.99□□□□□ -0.97
HMGN3-201ENST00000275036 KIAA0087Q14695 138 aa8.99□□□□□ -0.97
HMGN3-201ENST00000275036 RPL18AQ02543 176 aaKnown RBP8.98□□□□□ -0.97
HMGN3-201ENST00000275036 RNF151Q2KHN1 245 aa8.98□□□□□ -0.97
HMGN3-201ENST00000275036 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
HMGN3-201ENST00000275036 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
HMGN3-201ENST00000275036 MRPL35Q9NZE8 188 aaKnown RBP8.98□□□□□ -0.97
HMGN3-201ENST00000275036 CARHSP1Q9Y2V2 147 aaKnown RBP8.98□□□□□ -0.97
HMGN3-201ENST00000275036 S100PP25815 95 aa8.97□□□□□ -0.97
HMGN3-201ENST00000275036 C6orf48Q9UBA6 75 aa8.97□□□□□ -0.97
HMGN3-201ENST00000275036 F8WDY8 70 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 NDUFA1O15239 70 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 NPSP0C0P6 89 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 SERTAD4-AS1Q5TG53 156 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 Q6ZN92 141 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 C2orf88Q9BSF0 95 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 ALKBH7Q9BT30 221 aaPredicted RBP8.96□□□□□ -0.98
HMGN3-201ENST00000275036 VCX2Q9H322 139 aa8.96□□□□□ -0.98
HMGN3-201ENST00000275036 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
HMGN3-201ENST00000275036 FAM19A3Q7Z5A8 133 aa8.95□□□□□ -0.98
HMGN3-201ENST00000275036 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
HMGN3-201ENST00000275036 LINC01546A6NGU7 62 aa8.94□□□□□ -0.98
HMGN3-201ENST00000275036 RHEBQ15382 184 aa8.94□□□□□ -0.98
HMGN3-201ENST00000275036 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
HMGN3-201ENST00000275036 Q6ZRP5 223 aa8.94□□□□□ -0.98
HMGN3-201ENST00000275036 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
HMGN3-201ENST00000275036 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
HMGN3-201ENST00000275036 LINC01561Q8N1V8 128 aa8.93□□□□□ -0.98
HMGN3-201ENST00000275036 MRPL18Q9H0U6 180 aaKnown RBP8.93□□□□□ -0.98
HMGN3-201ENST00000275036 FAM168BA1KXE4 195 aa8.92□□□□□ -0.98
HMGN3-201ENST00000275036 COX19Q49B96 90 aa8.92□□□□□ -0.98
HMGN3-201ENST00000275036 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
HMGN3-201ENST00000275036 MT-ND6P03923 174 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 G0S2P27469 103 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 FABP9Q0Z7S8 132 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 ODF1Q14990 250 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 ERASQ7Z444 233 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
HMGN3-201ENST00000275036 TRBV30A0A0K0K1B3 111 aa8.9□□□□□ -0.98
HMGN3-201ENST00000275036 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMGN3-201ENST00000275036 GAGE2EQ4V326 116 aa8.9□□□□□ -0.98
HMGN3-201ENST00000275036 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
HMGN3-201ENST00000275036 GAGE2DQ9UEU5 116 aa8.9□□□□□ -0.98
HMGN3-201ENST00000275036 PLA2G2DQ9UNK4 145 aa8.9□□□□□ -0.98
HMGN3-201ENST00000275036 APOC3P02656 99 aa8.89□□□□□ -0.99
HMGN3-201ENST00000275036 HERVK_113P63121 156 aa8.89□□□□□ -0.99
HMGN3-201ENST00000275036 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms