RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 Q6Q795 121 aa12.17□□□□□ -0.46
SPG7-201ENST00000268704 J3QKU1 62 aa12.17□□□□□ -0.46
SPG7-201ENST00000268704 FSHBP01225 129 aa12.17□□□□□ -0.46
SPG7-201ENST00000268704 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
SPG7-201ENST00000268704 A0A1W2PRX2 142 aa12.16□□□□□ -0.46
SPG7-201ENST00000268704 COX7A2LO14548 114 aa12.16□□□□□ -0.46
SPG7-201ENST00000268704 FN1P02751 2386 aaKnown RBP12.16□□□□□ -0.46
SPG7-201ENST00000268704 DEFB121Q5J5C9 76 aa12.16□□□□□ -0.46
SPG7-201ENST00000268704 C4orf3Q8WVX3 66 aa12.16□□□□□ -0.46
SPG7-201ENST00000268704 Q96MF0 132 aa12.16□□□□□ -0.46
SPG7-201ENST00000268704 FAM218AQ96MZ4 157 aa12.15□□□□□ -0.46
SPG7-201ENST00000268704 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
SPG7-201ENST00000268704 STHQ8IWL8 128 aa12.14□□□□□ -0.47
SPG7-201ENST00000268704 F5H768 121 aa12.14□□□□□ -0.47
SPG7-201ENST00000268704 K7EQD1 137 aa12.14□□□□□ -0.47
SPG7-201ENST00000268704 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
SPG7-201ENST00000268704 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
SPG7-201ENST00000268704 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
SPG7-201ENST00000268704 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
SPG7-201ENST00000268704 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
SPG7-201ENST00000268704 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
SPG7-201ENST00000268704 LOC100131303A0A0U1RQF7 123 aa12.13□□□□□ -0.47
SPG7-201ENST00000268704 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
SPG7-201ENST00000268704 DAZ2Q13117 558 aaKnown RBP12.12□□□□□ -0.47
SPG7-201ENST00000268704 DAZ4Q86SG3 579 aaKnown RBP12.12□□□□□ -0.47
SPG7-201ENST00000268704 DAZ3Q9NR90 486 aaKnown RBP12.12□□□□□ -0.47
SPG7-201ENST00000268704 IL17DQ8TAD2 202 aa12.12□□□□□ -0.47
SPG7-201ENST00000268704 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
SPG7-201ENST00000268704 Q9HAA7 133 aa12.11□□□□□ -0.47
SPG7-201ENST00000268704 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
SPG7-201ENST00000268704 WFDC10AQ9H1F0 79 aa12.1□□□□□ -0.47
SPG7-201ENST00000268704 C22orf24Q9Y442 160 aa12.1□□□□□ -0.47
SPG7-201ENST00000268704 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
SPG7-201ENST00000268704 BAALC-AS2P0C853 105 aa12.09□□□□□ -0.47
SPG7-201ENST00000268704 UBE2L6O14933 153 aa12.08□□□□□ -0.48
SPG7-201ENST00000268704 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
SPG7-201ENST00000268704 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
SPG7-201ENST00000268704 ITPR3Q14573 2671 aa12.08□□□□□ -0.48
SPG7-201ENST00000268704 TRBV7-7A0A0K0K1E9 115 aa12.07□□□□□ -0.48
SPG7-201ENST00000268704 MIR7-3HGQ8N6C7 128 aa12.07□□□□□ -0.48
SPG7-201ENST00000268704 LINC00337Q8N6G1 96 aa12.07□□□□□ -0.48
SPG7-201ENST00000268704 MTORP42345 2549 aa12.06□□□□□ -0.48
SPG7-201ENST00000268704 TRBV10-1A0A0K0K1A3 114 aa12.06□□□□□ -0.48
SPG7-201ENST00000268704 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
SPG7-201ENST00000268704 APCP25054 2843 aa12.05□□□□□ -0.48
SPG7-201ENST00000268704 IGKV2-28A0A075B6P5 120 aa12.04□□□□□ -0.48
SPG7-201ENST00000268704 IGKV2D-28P01615 120 aa12.04□□□□□ -0.48
SPG7-201ENST00000268704 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
SPG7-201ENST00000268704 TRACP01848 142 aa12.04□□□□□ -0.48
SPG7-201ENST00000268704 COPS9Q8WXC6 57 aa12.04□□□□□ -0.48
SPG7-201ENST00000268704 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
SPG7-201ENST00000268704 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
SPG7-201ENST00000268704 GIG44P09565 113 aaPredicted RBP12.03□□□□□ -0.48
SPG7-201ENST00000268704 RPL35AP18077 110 aaKnown RBP12.03□□□□□ -0.48
SPG7-201ENST00000268704 CRPP02741 224 aa12.02□□□□□ -0.48
SPG7-201ENST00000268704 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.48
SPG7-201ENST00000268704 HIST2H2BCQ6DN03 193 aa12.02□□□□□ -0.48
SPG7-201ENST00000268704 FLNAP21333 2647 aaKnown RBP12.02□□□□□ -0.48
SPG7-201ENST00000268704 COX7B2Q8TF08 81 aa12.02□□□□□ -0.49
SPG7-201ENST00000268704 SND1-IT1Q9HBX3 110 aa12.02□□□□□ -0.49
SPG7-201ENST00000268704 A0A087WYN8 130 aa12.02□□□□□ -0.49
SPG7-201ENST00000268704 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.49
SPG7-201ENST00000268704 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
SPG7-201ENST00000268704 CYSTM1Q9H1C7 97 aa12.02□□□□□ -0.49
SPG7-201ENST00000268704 CCL24O00175 119 aa12.01□□□□□ -0.49
SPG7-201ENST00000268704 LINC00158P58513 81 aa12.01□□□□□ -0.49
SPG7-201ENST00000268704 C11orf68Q9H3H3 251 aaKnown RBP12.01□□□□□ -0.49
SPG7-201ENST00000268704 ACYP1P07311 99 aa12□□□□□ -0.49
SPG7-201ENST00000268704 PFN2P35080 140 aa12□□□□□ -0.49
SPG7-201ENST00000268704 SMIM11BQ8TCY0 68 aa11.99□□□□□ -0.49
SPG7-201ENST00000268704 ATP5G1P05496 136 aa11.99□□□□□ -0.49
SPG7-201ENST00000268704 ACANP16112 2415 aa11.98□□□□□ -0.49
SPG7-201ENST00000268704 MALP21145 153 aa11.98□□□□□ -0.49
SPG7-201ENST00000268704 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
SPG7-201ENST00000268704 C5orf38Q86SI9 138 aa11.98□□□□□ -0.49
SPG7-201ENST00000268704 TRAV13-2A0A0B4J235 113 aa11.98□□□□□ -0.49
SPG7-201ENST00000268704 FAM19A5Q7Z5A7 132 aaPredicted RBP11.98□□□□□ -0.49
SPG7-201ENST00000268704 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
SPG7-201ENST00000268704 hADV29S1A0JD25 119 aa11.97□□□□□ -0.49
SPG7-201ENST00000268704 LINC00643Q86TS7 51 aa11.97□□□□□ -0.49
SPG7-201ENST00000268704 CCL18P55774 89 aa11.97□□□□□ -0.49
SPG7-201ENST00000268704 HECTD1Q9ULT8 2610 aa11.97□□□□□ -0.49
SPG7-201ENST00000268704 DNAJC9-AS1A6NH13 148 aa11.97□□□□□ -0.49
SPG7-201ENST00000268704 TRAV25A0A0B4J276 109 aa11.96□□□□□ -0.49
SPG7-201ENST00000268704 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.49
SPG7-201ENST00000268704 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
SPG7-201ENST00000268704 C3orf22Q8N5N4 141 aa11.95□□□□□ -0.5
SPG7-201ENST00000268704 KIR2DL5BQ8NHK3 375 aa11.95□□□□□ -0.5
SPG7-201ENST00000268704 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
SPG7-201ENST00000268704 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
SPG7-201ENST00000268704 SDIM1Q6ZPB5 146 aa11.95□□□□□ -0.5
SPG7-201ENST00000268704 IGHV3OR16-9A0A0B4J2B5 98 aa11.94□□□□□ -0.5
SPG7-201ENST00000268704 FAM222AQ5U5X8 452 aa11.94□□□□□ -0.5
SPG7-201ENST00000268704 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
SPG7-201ENST00000268704 IGKV3D-7A0A0C4DH55 119 aa11.93□□□□□ -0.5
SPG7-201ENST00000268704 DNAL4O96015 105 aa11.93□□□□□ -0.5
SPG7-201ENST00000268704 SLPIP03973 132 aa11.93□□□□□ -0.5
SPG7-201ENST00000268704 IMUPQ9GZP8 106 aa11.93□□□□□ -0.5
SPG7-201ENST00000268704 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
SPG7-201ENST00000268704 PF4P02776 101 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms