RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 LINC00694P0DN24 101 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 Q6ZSN1 163 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 SMIM11BQ8TCY0 68 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 LAMA1P25391 3075 aa12.06□□□□□ -0.48
SCAP-201ENST00000265565 PSCAO43653 123 aa12.05□□□□□ -0.48
SCAP-201ENST00000265565 LINC00315P59091 139 aa12.05□□□□□ -0.48
SCAP-201ENST00000265565 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
SCAP-201ENST00000265565 AMELXQ99217 191 aa12.05□□□□□ -0.48
SCAP-201ENST00000265565 CXCL5P42830 114 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 C6orf99Q4VX62 202 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 CDC42SE2Q9NRR3 84 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 VCANP13611 3396 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 PRORYQ9H606 182 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 SMIM1B2RUZ4 78 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
SCAP-201ENST00000265565 ENHOQ6UWT2 76 aa12.03□□□□□ -0.48
SCAP-201ENST00000265565 CHCHD10Q8WYQ3 142 aaPredicted RBP12.03□□□□□ -0.48
SCAP-201ENST00000265565 TRBV6-4A0A1B0GX49 114 aa12.03□□□□□ -0.48
SCAP-201ENST00000265565 REG3AQ06141 175 aa12.03□□□□□ -0.48
SCAP-201ENST00000265565 CENPEQ02224 2701 aa12.03□□□□□ -0.48
SCAP-201ENST00000265565 DIRC1Q969H9 104 aa12.03□□□□□ -0.48
SCAP-201ENST00000265565 NREPQ16612 68 aa12.02□□□□□ -0.48
SCAP-201ENST00000265565 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.48
SCAP-201ENST00000265565 CCL18P55774 89 aa12.02□□□□□ -0.49
SCAP-201ENST00000265565 UPK3BQ9BT76 320 aa12.02□□□□□ -0.49
SCAP-201ENST00000265565 XAGE1AQ9HD64 81 aa12.02□□□□□ -0.49
SCAP-201ENST00000265565 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.49
SCAP-201ENST00000265565 IMUPQ9GZP8 106 aa12.02□□□□□ -0.49
SCAP-201ENST00000265565 MUC4Q99102 2169 aa12.02□□□□□ -0.49
SCAP-201ENST00000265565 NBEAQ8NFP9 2946 aa12.01□□□□□ -0.49
SCAP-201ENST00000265565 FASNP49327 2511 aaKnown RBP12.01□□□□□ -0.49
SCAP-201ENST00000265565 MRAPQ8TCY5 172 aa12.01□□□□□ -0.49
SCAP-201ENST00000265565 HIGD2BQ4VC39 106 aa12.01□□□□□ -0.49
SCAP-201ENST00000265565 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
SCAP-201ENST00000265565 SCXQ7RTU7 201 aa12□□□□□ -0.49
SCAP-201ENST00000265565 UBE2DNLQ8IWF7 75 aa12□□□□□ -0.49
SCAP-201ENST00000265565 FREM2Q5SZK8 3169 aa12□□□□□ -0.49
SCAP-201ENST00000265565 Q6Q795 121 aa12□□□□□ -0.49
SCAP-201ENST00000265565 USP17L23D6RBM5 183 aa11.99□□□□□ -0.49
SCAP-201ENST00000265565 PRB2P02812 416 aaPredicted RBP11.99□□□□□ -0.49
SCAP-201ENST00000265565 LINC00482Q8N8I6 264 aa11.99□□□□□ -0.49
SCAP-201ENST00000265565 BBC3Q96PG8 261 aaPredicted RBP11.99□□□□□ -0.49
SCAP-201ENST00000265565 Q9UF83 564 aa11.98□□□□□ -0.49
SCAP-201ENST00000265565 DSPP15924 2871 aaKnown RBP11.98□□□□□ -0.49
SCAP-201ENST00000265565 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
SCAP-201ENST00000265565 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
SCAP-201ENST00000265565 ETDCA0A1B0GVM5 59 aa11.97□□□□□ -0.49
SCAP-201ENST00000265565 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCAP-201ENST00000265565 UBE2BP63146 152 aa11.97□□□□□ -0.49
SCAP-201ENST00000265565 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
SCAP-201ENST00000265565 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.5
SCAP-201ENST00000265565 A0A087WVE0 104 aa11.95□□□□□ -0.5
SCAP-201ENST00000265565 COX7CP15954 63 aa11.95□□□□□ -0.5
SCAP-201ENST00000265565 C1orf158Q8N1D5 194 aa11.95□□□□□ -0.5
SCAP-201ENST00000265565 COX7BP24311 80 aa11.95□□□□□ -0.5
SCAP-201ENST00000265565 J3QKU1 62 aa11.95□□□□□ -0.5
SCAP-201ENST00000265565 IGLV4-60A0A075B6I1 120 aa11.94□□□□□ -0.5
SCAP-201ENST00000265565 SZT2Q5T011 3432 aa11.94□□□□□ -0.5
SCAP-201ENST00000265565 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
SCAP-201ENST00000265565 SERP2Q8N6R1 65 aa11.93□□□□□ -0.5
SCAP-201ENST00000265565 Q6ZQY7 126 aa11.93□□□□□ -0.5
SCAP-201ENST00000265565 BRI3O95415 125 aa11.93□□□□□ -0.5
SCAP-201ENST00000265565 TMEM258P61165 79 aa11.93□□□□□ -0.5
SCAP-201ENST00000265565 LINC01006Q8NI28 216 aa11.92□□□□□ -0.5
SCAP-201ENST00000265565 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
SCAP-201ENST00000265565 A0A087WYN8 130 aa11.91□□□□□ -0.5
SCAP-201ENST00000265565 FAM19A4Q96LR4 140 aa11.91□□□□□ -0.5
SCAP-201ENST00000265565 PDE6GP18545 87 aa11.9□□□□□ -0.5
SCAP-201ENST00000265565 RPL28P46779 137 aaKnown RBP11.9□□□□□ -0.5
SCAP-201ENST00000265565 KRTAP10-9P60411 292 aa11.89□□□□□ -0.51
SCAP-201ENST00000265565 Q8N2B8 174 aa11.89□□□□□ -0.51
SCAP-201ENST00000265565 PLA2G2AP14555 144 aa11.89□□□□□ -0.51
SCAP-201ENST00000265565 C9orf116Q5BN46 136 aaPredicted RBP11.89□□□□□ -0.51
SCAP-201ENST00000265565 KLK5Q9Y337 293 aaPredicted RBP11.88□□□□□ -0.51
SCAP-201ENST00000265565 CD164L2Q6UWJ8 174 aa11.88□□□□□ -0.51
SCAP-201ENST00000265565 BEAN1Q3B7T3 259 aa11.87□□□□□ -0.51
SCAP-201ENST00000265565 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
SCAP-201ENST00000265565 FRYQ5TBA9 3013 aa11.87□□□□□ -0.51
SCAP-201ENST00000265565 COL27A1Q8IZC6 1860 aaPredicted RBP11.86□□□□□ -0.51
SCAP-201ENST00000265565 ATP5EP2Q5VTU8 51 aa11.86□□□□□ -0.51
SCAP-201ENST00000265565 LYRM9A8MSI8 78 aa11.86□□□□□ -0.51
SCAP-201ENST00000265565 BPY2O14599 106 aa11.86□□□□□ -0.51
SCAP-201ENST00000265565 CDK2AP2O75956 126 aa11.86□□□□□ -0.51
SCAP-201ENST00000265565 LINC00337Q8N6G1 96 aa11.86□□□□□ -0.51
SCAP-201ENST00000265565 H3BQ85 93 aa11.85□□□□□ -0.51
SCAP-201ENST00000265565 SNURFQ9Y675 71 aa11.85□□□□□ -0.51
SCAP-201ENST00000265565 SPEGQ15772 3267 aa11.85□□□□□ -0.51
SCAP-201ENST00000265565 FAM236DA0A1B0GTK5 79 aa11.85□□□□□ -0.51
SCAP-201ENST00000265565 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
SCAP-201ENST00000265565 FAM236CP0DP71 79 aa11.85□□□□□ -0.51
SCAP-201ENST00000265565 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
SCAP-201ENST00000265565 A0A087WZ39 114 aa11.84□□□□□ -0.51
SCAP-201ENST00000265565 M0QXV9 152 aa11.84□□□□□ -0.51
SCAP-201ENST00000265565 RMI2Q96E14 147 aa11.84□□□□□ -0.51
SCAP-201ENST00000265565 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
SCAP-201ENST00000265565 Q6JHZ5 121 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms