RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 CRLF1O75462 422 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 PF4P02776 101 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 WFDC9Q8NEX5 89 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 Q9H8V8 135 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 TRGV4A0A0C4DH28 118 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 IGLV4-60A0A075B6I1 120 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 A0A087WZ39 114 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 RPL13AP40429 203 aaKnown RBP7.76□□□□□ -1.17
MSH3-201ENST00000265081 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 COPS9Q8WXC6 57 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 J3QR89 54 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 UBE2L6O14933 153 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 PPDPFLQ8WWR9 84 aa7.76□□□□□ -1.17
MSH3-201ENST00000265081 TRAV26-1A0A087WT03 109 aa7.75□□□□□ -1.17
MSH3-201ENST00000265081 MTURNQ8N3F0 131 aa7.75□□□□□ -1.17
MSH3-201ENST00000265081 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
MSH3-201ENST00000265081 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
MSH3-201ENST00000265081 INAFM1C9JVW0 142 aa7.75□□□□□ -1.17
MSH3-201ENST00000265081 CIRBPQ14011 172 aaKnown RBP7.75□□□□□ -1.17
MSH3-201ENST00000265081 TRAV13-1A0A0B4J241 112 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 LST1O00453 97 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 LINC01620Q4KN68 170 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 DEFB121Q5J5C9 76 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 ANK2Q01484 3957 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 TRBV10-2A0A0K0K1G8 114 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 SFTA2Q6UW10 78 aa7.74□□□□□ -1.17
MSH3-201ENST00000265081 SLC25A20O43772 301 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 ANKRD29Q8N6D5 301 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 GCN1Q92616 2671 aaKnown RBP7.73□□□□□ -1.17
MSH3-201ENST00000265081 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 Q8NAQ8 132 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 COX7B2Q8TF08 81 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 PRO0255Q9UI72 69 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 SVIPQ8NHG7 77 aa7.73□□□□□ -1.17
MSH3-201ENST00000265081 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
MSH3-201ENST00000265081 HELZ2Q9BYK8 2649 aaKnown RBP7.72□□□□□ -1.17
MSH3-201ENST00000265081 H3BT86 120 aa7.71□□□□□ -1.17
MSH3-201ENST00000265081 GAGE6Q13070 117 aa7.71□□□□□ -1.17
MSH3-201ENST00000265081 APOC4P55056 127 aa7.71□□□□□ -1.18
MSH3-201ENST00000265081 DAND5Q8N907 189 aa7.71□□□□□ -1.18
MSH3-201ENST00000265081 SCGB1C2P0DMR2 95 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 PRSS2P07478 247 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 MIFP14174 115 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 GYPEP15421 78 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 PRIMA1Q86XR5 153 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 IBA57-AS1B1ANH7 110 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 SIGMAR1Q99720 223 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 VWFP04275 2813 aa7.7□□□□□ -1.18
MSH3-201ENST00000265081 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
MSH3-201ENST00000265081 NSD1Q96L73 2696 aaPredicted RBP7.69□□□□□ -1.18
MSH3-201ENST00000265081 C9JAW5 83 aa7.69□□□□□ -1.18
MSH3-201ENST00000265081 COX7A2LO14548 114 aa7.69□□□□□ -1.18
MSH3-201ENST00000265081 SONP18583 2426 aaKnown RBP7.69□□□□□ -1.18
MSH3-201ENST00000265081 TLN2Q9Y4G6 2542 aa7.69□□□□□ -1.18
MSH3-201ENST00000265081 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 Q8IZM0 81 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 IGHV4-28A0A0C4DH34 117 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 NOTCH3Q9UM47 2321 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 DEFB130BP0DP73 79 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 DEFB130AP0DP74 79 aa7.68□□□□□ -1.18
MSH3-201ENST00000265081 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
MSH3-201ENST00000265081 NPC2P61916 151 aa7.67□□□□□ -1.18
MSH3-201ENST00000265081 COX6CP09669 75 aa7.67□□□□□ -1.18
MSH3-201ENST00000265081 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
MSH3-201ENST00000265081 TRRAPQ9Y4A5 3859 aa7.67□□□□□ -1.18
MSH3-201ENST00000265081 Q1RN00 199 aa7.67□□□□□ -1.18
MSH3-201ENST00000265081 KIAA0087Q14695 138 aa7.66□□□□□ -1.18
MSH3-201ENST00000265081 C22orf24Q9Y442 160 aa7.66□□□□□ -1.18
MSH3-201ENST00000265081 H7C2G1 150 aa7.66□□□□□ -1.18
MSH3-201ENST00000265081 TRACP01848 142 aa7.66□□□□□ -1.18
MSH3-201ENST00000265081 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
MSH3-201ENST00000265081 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
MSH3-201ENST00000265081 CLEC2BQ92478 149 aa7.65□□□□□ -1.18
MSH3-201ENST00000265081 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.19
MSH3-201ENST00000265081 PAX4O43316 350 aa7.65□□□□□ -1.19
MSH3-201ENST00000265081 C21orf62-AS1Q17RA5 79 aa7.65□□□□□ -1.19
MSH3-201ENST00000265081 TENM1Q9UKZ4 2725 aa7.65□□□□□ -1.19
MSH3-201ENST00000265081 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
MSH3-201ENST00000265081 DEFB135Q30KP9 77 aa7.64□□□□□ -1.19
MSH3-201ENST00000265081 LINC00337Q8N6G1 96 aa7.64□□□□□ -1.19
MSH3-201ENST00000265081 ACANP16112 2415 aa7.64□□□□□ -1.19
MSH3-201ENST00000265081 EGFEM1PQ0D2K5 195 aa7.64□□□□□ -1.19
MSH3-201ENST00000265081 MIR7-3HGQ8N6C7 128 aa7.64□□□□□ -1.19
MSH3-201ENST00000265081 TMEM262E9PQX1 116 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 SS18Q15532 418 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 CD164L2Q6UWJ8 174 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 PRR34Q9NV39 138 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 WNK1Q9H4A3 2382 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 H3BNG1 76 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 CCL18P55774 89 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 COX17Q14061 63 aa7.63□□□□□ -1.19
MSH3-201ENST00000265081 XGP55808 180 aa7.62□□□□□ -1.19
MSH3-201ENST00000265081 FASNP49327 2511 aaKnown RBP7.62□□□□□ -1.19
MSH3-201ENST00000265081 IGHV4-30-4P0DP06 118 aa7.62□□□□□ -1.19
MSH3-201ENST00000265081 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
MSH3-201ENST00000265081 ATP5G1P05496 136 aa7.62□□□□□ -1.19
MSH3-201ENST00000265081 UBE2WQ96B02 151 aa7.62□□□□□ -1.19
MSH3-201ENST00000265081 CCDC168Q8NDH2 2452 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms