RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 IGHV3-30P01768 117 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 IGHV3-33P01772 117 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 SPINK8P0C7L1 97 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 IGHV3-30-3P0DP02 117 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 IGHV3-30-5P0DP03 117 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 KLK12Q9UKR0 248 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 TRAV8-3A0A0A6YYJ7 113 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 SIVA1O15304 175 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 LINC01556Q5JQF7 62 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 LINC00588Q9Y4M8 146 aa16.22■□□□□ 0.19
EPCAM-201ENST00000263735 IGHV3OR16-9A0A0B4J2B5 98 aa16.21■□□□□ 0.19
EPCAM-201ENST00000263735 LGALS3P17931 250 aaKnown RBP16.21■□□□□ 0.19
EPCAM-201ENST00000263735 TSPEAR-AS2P59090 65 aa16.21■□□□□ 0.19
EPCAM-201ENST00000263735 MAPKAPK5-AS1Q8N8E1 139 aa16.21■□□□□ 0.19
EPCAM-201ENST00000263735 MYMXA0A1B0GTQ4 84 aa16.2■□□□□ 0.18
EPCAM-201ENST00000263735 C2orf91Q6ZV80 131 aa16.2■□□□□ 0.18
EPCAM-201ENST00000263735 ZNF815PA8K554 130 aa16.19■□□□□ 0.18
EPCAM-201ENST00000263735 SMIM1B2RUZ4 78 aa16.19■□□□□ 0.18
EPCAM-201ENST00000263735 APLNQ9ULZ1 77 aa16.19■□□□□ 0.18
EPCAM-201ENST00000263735 IGLV5-39A0A0G2JS06 123 aa16.18■□□□□ 0.18
EPCAM-201ENST00000263735 CRPP02741 224 aa16.18■□□□□ 0.18
EPCAM-201ENST00000263735 DNAH10OSP0CZ25 163 aa16.18■□□□□ 0.18
EPCAM-201ENST00000263735 CTAG1AP78358 180 aa16.18■□□□□ 0.18
EPCAM-201ENST00000263735 UPK3BQ9BT76 320 aa16.18■□□□□ 0.18
EPCAM-201ENST00000263735 KLK5Q9Y337 293 aaPredicted RBP16.18■□□□□ 0.18
EPCAM-201ENST00000263735 A0A087WZ39 114 aa16.17■□□□□ 0.18
EPCAM-201ENST00000263735 XCL1P47992 114 aa16.17■□□□□ 0.18
EPCAM-201ENST00000263735 HIGD1BQ9P298 99 aa16.17■□□□□ 0.18
EPCAM-201ENST00000263735 ENHOQ6UWT2 76 aa16.16■□□□□ 0.18
EPCAM-201ENST00000263735 CHCHD10Q8WYQ3 142 aaPredicted RBP16.16■□□□□ 0.18
EPCAM-201ENST00000263735 CD164L2Q6UWJ8 174 aa16.16■□□□□ 0.18
EPCAM-201ENST00000263735 TRAV8-4A0A0B4J246 113 aa16.14■□□□□ 0.17
EPCAM-201ENST00000263735 IGLV10-54A0A075B6I4 117 aa16.14■□□□□ 0.17
EPCAM-201ENST00000263735 MIAQ16674 131 aa16.14■□□□□ 0.17
EPCAM-201ENST00000263735 ZFAND6Q6FIF0 208 aa16.14■□□□□ 0.17
EPCAM-201ENST00000263735 LINC01561Q8N1V8 128 aa16.14■□□□□ 0.17
EPCAM-201ENST00000263735 UBE2WQ96B02 151 aa16.14■□□□□ 0.17
EPCAM-201ENST00000263735 DYNC2H1Q8NCM8 4307 aaKnown RBP16.13■□□□□ 0.17
EPCAM-201ENST00000263735 C5orf38Q86SI9 138 aa16.12■□□□□ 0.17
EPCAM-201ENST00000263735 SCGB1D4Q6XE38 83 aa16.11■□□□□ 0.17
EPCAM-201ENST00000263735 CSMD3Q7Z407 3707 aa16.11■□□□□ 0.17
EPCAM-201ENST00000263735 DNAH7Q8WXX0 4024 aa16.1■□□□□ 0.17
EPCAM-201ENST00000263735 FBN3Q75N90 2809 aa16.1■□□□□ 0.17
EPCAM-201ENST00000263735 NDUFA12Q9UI09 145 aa16.1■□□□□ 0.17
EPCAM-201ENST00000263735 COX7A2LO14548 114 aa16.08■□□□□ 0.17
EPCAM-201ENST00000263735 FOXI1Q12951 378 aa16.08■□□□□ 0.17
EPCAM-201ENST00000263735 M0R143 59 aa16.07■□□□□ 0.16
EPCAM-201ENST00000263735 NDUFA1O15239 70 aa16.07■□□□□ 0.16
EPCAM-201ENST00000263735 GAGE12HA6NDE8 117 aa16.06■□□□□ 0.16
EPCAM-201ENST00000263735 HSD52Q0P140 79 aa16.06■□□□□ 0.16
EPCAM-201ENST00000263735 UBE2DNLQ8IWF7 75 aa16.06■□□□□ 0.16
EPCAM-201ENST00000263735 C10orf126Q8N4M7 172 aa16.06■□□□□ 0.16
EPCAM-201ENST00000263735 COX7B2Q8TF08 81 aa16.06■□□□□ 0.16
EPCAM-201ENST00000263735 Q9H8V8 135 aa16.06■□□□□ 0.16
EPCAM-201ENST00000263735 SNHG12Q9BXW3 62 aa16.05■□□□□ 0.16
EPCAM-201ENST00000263735 A0A0J9YXY3 114 aa16.03■□□□□ 0.16
EPCAM-201ENST00000263735 IBA57-AS1B1ANH7 110 aa16.03■□□□□ 0.16
EPCAM-201ENST00000263735 K7EP13 123 aa16.03■□□□□ 0.16
EPCAM-201ENST00000263735 MALP21145 153 aa16.03■□□□□ 0.16
EPCAM-201ENST00000263735 HINT1P49773 126 aaPredicted RBP16.03■□□□□ 0.16
EPCAM-201ENST00000263735 TAL2Q16559 108 aa16.03■□□□□ 0.16
EPCAM-201ENST00000263735 TOMM7Q9P0U1 55 aa16.03■□□□□ 0.16
EPCAM-201ENST00000263735 EREGO14944 169 aa16.02■□□□□ 0.15
EPCAM-201ENST00000263735 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.15
EPCAM-201ENST00000263735 C1orf43Q9BWL3 253 aa16.02■□□□□ 0.15
EPCAM-201ENST00000263735 Q8IZM0 81 aa16.01■□□□□ 0.15
EPCAM-201ENST00000263735 SPANXB1Q9NS25 103 aaPredicted RBP16.01■□□□□ 0.15
EPCAM-201ENST00000263735 APOMO95445 188 aa16■□□□□ 0.15
EPCAM-201ENST00000263735 BVES-AS1Q5T3Y7 98 aa16■□□□□ 0.15
EPCAM-201ENST00000263735 KRTAP26-1Q6PEX3 210 aa16■□□□□ 0.15
EPCAM-201ENST00000263735 HERV-K104P63124 156 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 SFTA2Q6UW10 78 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 HIST1H4GQ99525 98 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 TMEM238C9JI98 176 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 PRSS2P07478 247 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 BATFQ16520 125 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 ORAOV1Q8WV07 137 aa15.99■□□□□ 0.15
EPCAM-201ENST00000263735 MUC7Q8TAX7 377 aa15.98■□□□□ 0.15
EPCAM-201ENST00000263735 IGKV2D-24A0A075B6R9 120 aa15.97■□□□□ 0.15
EPCAM-201ENST00000263735 SRSF9Q13242 221 aaKnown RBP eCLIP15.97■□□□□ 0.15
EPCAM-201ENST00000263735 LBHQ53QV2 105 aaPredicted RBP15.97■□□□□ 0.15
EPCAM-201ENST00000263735 C6orf226Q5I0X4 101 aa15.97■□□□□ 0.15
EPCAM-201ENST00000263735 CEND1Q8N111 149 aa15.97■□□□□ 0.15
EPCAM-201ENST00000263735 TIMM17BO60830 172 aa15.96■□□□□ 0.15
EPCAM-201ENST00000263735 Q9HAA7 133 aa15.96■□□□□ 0.15
EPCAM-201ENST00000263735 STARD9Q9P2P6 4700 aa15.95■□□□□ 0.14
EPCAM-201ENST00000263735 WWC2-AS2Q96NR7 200 aa15.95■□□□□ 0.14
EPCAM-201ENST00000263735 GCSHP23434 173 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 CXCL5P42830 114 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 RMI2Q96E14 147 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 LITAFQ99732 161 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 TM2D2Q9BX73 214 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 KIAA0087Q14695 138 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 LYSTQ99698 3801 aa15.94■□□□□ 0.14
EPCAM-201ENST00000263735 PLECQ15149 4684 aaKnown RBP15.93■□□□□ 0.14
EPCAM-201ENST00000263735 CIRBPQ14011 172 aaKnown RBP15.93■□□□□ 0.14
EPCAM-201ENST00000263735 CFAP161Q6P656 301 aa15.93■□□□□ 0.14
EPCAM-201ENST00000263735 TENM2Q9NT68 2774 aa15.92■□□□□ 0.14
EPCAM-201ENST00000263735 SPANXDQ9BXN6 97 aa15.91■□□□□ 0.14
EPCAM-201ENST00000263735 SPANXCQ9NY87 97 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms