RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
CD44-201ENST00000263398 FAM110AQ9BQ89 295 aa7.9□□□□□ -1.15
CD44-201ENST00000263398 XAGE1AQ9HD64 81 aa7.9□□□□□ -1.15
CD44-201ENST00000263398 MGAQ8IWI9 3026 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 CDSNQ15517 529 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 MRGPRG-AS1Q2M3A8 158 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 COX8CQ7Z4L0 72 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 KLK5Q9Y337 293 aaPredicted RBP7.89□□□□□ -1.15
CD44-201ENST00000263398 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 CD164L2Q6UWJ8 174 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
CD44-201ENST00000263398 DEFB131BA0A096LNP1 70 aa7.88□□□□□ -1.15
CD44-201ENST00000263398 IGKV2-24A0A0C4DH68 120 aa7.88□□□□□ -1.15
CD44-201ENST00000263398 UBE2D1P51668 147 aa7.88□□□□□ -1.15
CD44-201ENST00000263398 LINC01006Q8NI28 216 aa7.88□□□□□ -1.15
CD44-201ENST00000263398 BBC3Q96PG8 261 aaPredicted RBP7.88□□□□□ -1.15
CD44-201ENST00000263398 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
CD44-201ENST00000263398 IMUPQ9GZP8 106 aa7.88□□□□□ -1.15
CD44-201ENST00000263398 PRB2P02812 416 aaPredicted RBP7.88□□□□□ -1.15
CD44-201ENST00000263398 SPTBN5Q9NRC6 3674 aaKnown RBP7.88□□□□□ -1.15
CD44-201ENST00000263398 NDUFC2O95298 119 aa7.87□□□□□ -1.15
CD44-201ENST00000263398 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
CD44-201ENST00000263398 CRIP2P52943 208 aaPredicted RBP7.87□□□□□ -1.15
CD44-201ENST00000263398 MYO15AQ9UKN7 3530 aa7.87□□□□□ -1.15
CD44-201ENST00000263398 PRM2P04554 102 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 POM121L12Q8N7R1 296 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 LINC00959A0A1B0GUT2 108 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 B9D2Q9BPU9 175 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 ENHOQ6UWT2 76 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 C18orf65Q6ZTR6 163 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 ZNF462Q96JM2 2506 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 H0Y9J4 135 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 AVPP01185 164 aa7.86□□□□□ -1.15
CD44-201ENST00000263398 EXPH5Q8NEV8 1989 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 COL4A2P08572 1712 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 UBE2D3P61077 147 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 UBE2D2P62837 147 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 INAFM1C9JVW0 142 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 C3orf22Q8N5N4 141 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 FRYLO94915 3013 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 LOC100131303A0A0U1RQF7 123 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 WFDC10AQ9H1F0 79 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 CPAMD8Q8IZJ3 1885 aa7.85□□□□□ -1.15
CD44-201ENST00000263398 HILS1P60008 231 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 Q6ZQY7 126 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 MTORP42345 2549 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 REV3LO60673 3130 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 A0A096LNJ9 63 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 XGP55808 180 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 ZNF843Q8N446 348 aa7.84□□□□□ -1.15
CD44-201ENST00000263398 KIR2DL5BQ8NHK3 375 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 SMIM11BQ8TCY0 68 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 CCKP06307 115 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 LELP1Q5T871 98 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 BRI3O95415 125 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 ODF3L2Q3SX64 289 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
CD44-201ENST00000263398 FASNP49327 2511 aaKnown RBP7.82□□□□□ -1.16
CD44-201ENST00000263398 IL17DQ8TAD2 202 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 MUC7Q8TAX7 377 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 FAM236DA0A1B0GTK5 79 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 FAM236CP0DP71 79 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 Q8IZM0 81 aa7.82□□□□□ -1.16
CD44-201ENST00000263398 IGLV4-69A0A075B6H9 119 aa7.81□□□□□ -1.16
CD44-201ENST00000263398 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
CD44-201ENST00000263398 COX17Q14061 63 aa7.81□□□□□ -1.16
CD44-201ENST00000263398 LINC00526Q96FQ7 95 aa7.81□□□□□ -1.16
CD44-201ENST00000263398 COL5A1P20908 1838 aaPredicted RBP7.8□□□□□ -1.16
CD44-201ENST00000263398 EDN2P20800 178 aa7.8□□□□□ -1.16
CD44-201ENST00000263398 CENPEQ02224 2701 aa7.8□□□□□ -1.16
CD44-201ENST00000263398 M0R378 163 aa7.8□□□□□ -1.16
CD44-201ENST00000263398 KPRPQ5T749 579 aaPredicted RBP7.8□□□□□ -1.16
CD44-201ENST00000263398 SHISA2Q6UWI4 295 aa7.8□□□□□ -1.16
CD44-201ENST00000263398 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
CD44-201ENST00000263398 ZNF580Q9UK33 172 aa7.8□□□□□ -1.16
CD44-201ENST00000263398 IGLV2-18A0A075B6J9 118 aa7.79□□□□□ -1.16
CD44-201ENST00000263398 A0A096LNI7 61 aa7.79□□□□□ -1.16
CD44-201ENST00000263398 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
CD44-201ENST00000263398 A0A1W2PPR1 153 aa7.79□□□□□ -1.16
CD44-201ENST00000263398 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
CD44-201ENST00000263398 A0A087WZ39 114 aa7.78□□□□□ -1.16
CD44-201ENST00000263398 TRAV10A0A0B4J240 114 aa7.78□□□□□ -1.16
CD44-201ENST00000263398 TSPEAR-AS2P59090 65 aa7.78□□□□□ -1.16
CD44-201ENST00000263398 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
CD44-201ENST00000263398 NDUFA7O95182 113 aa7.78□□□□□ -1.16
CD44-201ENST00000263398 LY6G6DO95868 133 aa7.78□□□□□ -1.16
CD44-201ENST00000263398 CHCHD7Q9BUK0 85 aa7.78□□□□□ -1.16
CD44-201ENST00000263398 Q6Q795 121 aa7.77□□□□□ -1.17
CD44-201ENST00000263398 AMELXQ99217 191 aa7.77□□□□□ -1.17
CD44-201ENST00000263398 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
CD44-201ENST00000263398 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
CD44-201ENST00000263398 COX7CP15954 63 aa7.77□□□□□ -1.17
CD44-201ENST00000263398 CSDC2Q9Y534 153 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms