RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 IGHV3-33P01772 117 aa15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 IGHV3-30-3P0DP02 117 aa15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 IGHV3-30-5P0DP03 117 aa15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 SS18Q15532 418 aa15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 MRPS16Q9Y3D3 137 aaKnown RBP15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 LINC00588Q9Y4M8 146 aa15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 IGHV3OR16-9A0A0B4J2B5 98 aa15.54■□□□□ 0.08
SMARCB1-201ENST00000263121 J3QQQ9 107 aa15.54■□□□□ 0.08
SMARCB1-201ENST00000263121 PLEKHB2Q96CS7 222 aa15.54■□□□□ 0.08
SMARCB1-201ENST00000263121 DYNC2H1Q8NCM8 4307 aaKnown RBP15.54■□□□□ 0.08
SMARCB1-201ENST00000263121 KLK12Q9UKR0 248 aa15.54■□□□□ 0.08
SMARCB1-201ENST00000263121 MYMXA0A1B0GTQ4 84 aa15.53■□□□□ 0.08
SMARCB1-201ENST00000263121 SIVA1O15304 175 aa15.53■□□□□ 0.08
SMARCB1-201ENST00000263121 CCL18P55774 89 aa15.53■□□□□ 0.08
SMARCB1-201ENST00000263121 CTAG1AP78358 180 aa15.53■□□□□ 0.08
SMARCB1-201ENST00000263121 LINC01556Q5JQF7 62 aa15.53■□□□□ 0.08
SMARCB1-201ENST00000263121 IGLV5-39A0A0G2JS06 123 aa15.52■□□□□ 0.08
SMARCB1-201ENST00000263121 SMIM1B2RUZ4 78 aa15.52■□□□□ 0.08
SMARCB1-201ENST00000263121 APLNQ9ULZ1 77 aa15.51■□□□□ 0.07
SMARCB1-201ENST00000263121 ZNF815PA8K554 130 aa15.51■□□□□ 0.07
SMARCB1-201ENST00000263121 LGALS3P17931 250 aaKnown RBP15.51■□□□□ 0.07
SMARCB1-201ENST00000263121 ENHOQ6UWT2 76 aa15.51■□□□□ 0.07
SMARCB1-201ENST00000263121 NUPR2A6NF83 97 aa15.5■□□□□ 0.07
SMARCB1-201ENST00000263121 DNAH10OSP0CZ25 163 aa15.5■□□□□ 0.07
SMARCB1-201ENST00000263121 XCL1P47992 114 aa15.5■□□□□ 0.07
SMARCB1-201ENST00000263121 A0A087WZ39 114 aa15.49■□□□□ 0.07
SMARCB1-201ENST00000263121 CHCHD10Q8WYQ3 142 aaPredicted RBP15.48■□□□□ 0.07
SMARCB1-201ENST00000263121 UPK3BQ9BT76 320 aa15.48■□□□□ 0.07
SMARCB1-201ENST00000263121 HIGD1BQ9P298 99 aa15.48■□□□□ 0.07
SMARCB1-201ENST00000263121 CD164L2Q6UWJ8 174 aa15.48■□□□□ 0.07
SMARCB1-201ENST00000263121 IGLV10-54A0A075B6I4 117 aa15.46■□□□□ 0.07
SMARCB1-201ENST00000263121 C5orf38Q86SI9 138 aa15.46■□□□□ 0.07
SMARCB1-201ENST00000263121 DNAH7Q8WXX0 4024 aa15.46■□□□□ 0.06
SMARCB1-201ENST00000263121 CRPP02741 224 aa15.45■□□□□ 0.06
SMARCB1-201ENST00000263121 ZFAND6Q6FIF0 208 aa15.45■□□□□ 0.06
SMARCB1-201ENST00000263121 UBE2WQ96B02 151 aa15.45■□□□□ 0.06
SMARCB1-201ENST00000263121 KLK5Q9Y337 293 aaPredicted RBP15.45■□□□□ 0.06
SMARCB1-201ENST00000263121 LINC01561Q8N1V8 128 aa15.44■□□□□ 0.06
SMARCB1-201ENST00000263121 FBN3Q75N90 2809 aa15.44■□□□□ 0.06
SMARCB1-201ENST00000263121 TRAV8-4A0A0B4J246 113 aa15.43■□□□□ 0.06
SMARCB1-201ENST00000263121 FOXI1Q12951 378 aa15.43■□□□□ 0.06
SMARCB1-201ENST00000263121 MIAQ16674 131 aa15.43■□□□□ 0.06
SMARCB1-201ENST00000263121 NDUFA12Q9UI09 145 aa15.42■□□□□ 0.06
SMARCB1-201ENST00000263121 C10orf126Q8N4M7 172 aa15.41■□□□□ 0.06
SMARCB1-201ENST00000263121 SNHG12Q9BXW3 62 aa15.41■□□□□ 0.06
SMARCB1-201ENST00000263121 SCGB1D4Q6XE38 83 aa15.41■□□□□ 0.06
SMARCB1-201ENST00000263121 GAGE12HA6NDE8 117 aa15.4■□□□□ 0.06
SMARCB1-201ENST00000263121 M0R143 59 aa15.4■□□□□ 0.06
SMARCB1-201ENST00000263121 COX7A2LO14548 114 aa15.4■□□□□ 0.06
SMARCB1-201ENST00000263121 CSMD3Q7Z407 3707 aa15.39■□□□□ 0.05
SMARCB1-201ENST00000263121 EREGO14944 169 aa15.39■□□□□ 0.05
SMARCB1-201ENST00000263121 NDUFA1O15239 70 aa15.39■□□□□ 0.05
SMARCB1-201ENST00000263121 HSD52Q0P140 79 aa15.39■□□□□ 0.05
SMARCB1-201ENST00000263121 COX7B2Q8TF08 81 aa15.38■□□□□ 0.05
SMARCB1-201ENST00000263121 HINT1P49773 126 aaPredicted RBP15.38■□□□□ 0.05
SMARCB1-201ENST00000263121 Q9H8V8 135 aa15.38■□□□□ 0.05
SMARCB1-201ENST00000263121 A0A0J9YXY3 114 aa15.37■□□□□ 0.05
SMARCB1-201ENST00000263121 KRTAP26-1Q6PEX3 210 aa15.37■□□□□ 0.05
SMARCB1-201ENST00000263121 ZNF625Q96I27 306 aaPredicted RBP15.36■□□□□ 0.05
SMARCB1-201ENST00000263121 IBA57-AS1B1ANH7 110 aa15.35■□□□□ 0.05
SMARCB1-201ENST00000263121 BVES-AS1Q5T3Y7 98 aa15.35■□□□□ 0.05
SMARCB1-201ENST00000263121 UBE2DNLQ8IWF7 75 aa15.35■□□□□ 0.05
SMARCB1-201ENST00000263121 TOMM7Q9P0U1 55 aa15.35■□□□□ 0.05
SMARCB1-201ENST00000263121 TAL2Q16559 108 aa15.34■□□□□ 0.05
SMARCB1-201ENST00000263121 PLECQ15149 4684 aaKnown RBP15.33■□□□□ 0.05
SMARCB1-201ENST00000263121 MALP21145 153 aa15.33■□□□□ 0.04
SMARCB1-201ENST00000263121 BATFQ16520 125 aa15.33■□□□□ 0.04
SMARCB1-201ENST00000263121 SPANXB1Q9NS25 103 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-201ENST00000263121 STARD9Q9P2P6 4700 aa15.33■□□□□ 0.04
SMARCB1-201ENST00000263121 Q8IZM0 81 aa15.32■□□□□ 0.04
SMARCB1-201ENST00000263121 HIST1H4GQ99525 98 aa15.32■□□□□ 0.04
SMARCB1-201ENST00000263121 C1orf43Q9BWL3 253 aa15.32■□□□□ 0.04
SMARCB1-201ENST00000263121 K7EP13 123 aa15.31■□□□□ 0.04
SMARCB1-201ENST00000263121 ORAOV1Q8WV07 137 aa15.31■□□□□ 0.04
SMARCB1-201ENST00000263121 LITAFQ99732 161 aa15.31■□□□□ 0.04
SMARCB1-201ENST00000263121 HERV-K104P63124 156 aa15.3■□□□□ 0.04
SMARCB1-201ENST00000263121 APOMO95445 188 aa15.29■□□□□ 0.04
SMARCB1-201ENST00000263121 KIAA0087Q14695 138 aa15.29■□□□□ 0.04
SMARCB1-201ENST00000263121 CEND1Q8N111 149 aa15.29■□□□□ 0.04
SMARCB1-201ENST00000263121 MUC7Q8TAX7 377 aa15.29■□□□□ 0.04
SMARCB1-201ENST00000263121 TMEM238C9JI98 176 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 TIMM17BO60830 172 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 TM2D2Q9BX73 214 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 Q9HAA7 133 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 DNAH1Q9P2D7 4330 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 IGKV2D-24A0A075B6R9 120 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 PRSS2P07478 247 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 GCSHP23434 173 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 C6orf226Q5I0X4 101 aa15.28■□□□□ 0.04
SMARCB1-201ENST00000263121 SRSF9Q13242 221 aaKnown RBP eCLIP15.27■□□□□ 0.03
SMARCB1-201ENST00000263121 SFTA2Q6UW10 78 aa15.27■□□□□ 0.03
SMARCB1-201ENST00000263121 LBHQ53QV2 105 aaPredicted RBP15.26■□□□□ 0.03
SMARCB1-201ENST00000263121 FXYD2P54710 66 aa15.25■□□□□ 0.03
SMARCB1-201ENST00000263121 LYSTQ99698 3801 aa15.25■□□□□ 0.03
SMARCB1-201ENST00000263121 ADAMTSL4-AS1Q5T5F5 129 aa15.25■□□□□ 0.03
SMARCB1-201ENST00000263121 KRTAP1-5Q9BYS1 174 aa15.25■□□□□ 0.03
SMARCB1-201ENST00000263121 WWC2-AS2Q96NR7 200 aa15.24■□□□□ 0.03
SMARCB1-201ENST00000263121 SPANXDQ9BXN6 97 aa15.24■□□□□ 0.03
SMARCB1-201ENST00000263121 SPANXCQ9NY87 97 aa15.24■□□□□ 0.03
SMARCB1-201ENST00000263121 CXCL5P42830 114 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms