RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 NIPBLQ6KC79 2804 aaeCLIP10.37□□□□□ -0.75
SCARF1-201ENST00000263071 IGHV3-53P01767 116 aa10.37□□□□□ -0.75
SCARF1-201ENST00000263071 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
SCARF1-201ENST00000263071 C14orf132Q9NPU4 83 aa10.37□□□□□ -0.75
SCARF1-201ENST00000263071 TIMM17BO60830 172 aa10.37□□□□□ -0.75
SCARF1-201ENST00000263071 DOPEY1Q5JWR5 2465 aa10.37□□□□□ -0.75
SCARF1-201ENST00000263071 A0A0J9YX75 114 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 DGAT2L7PQ6IED9 249 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 LINC00474Q9P2X8 69 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
SCARF1-201ENST00000263071 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 Q9HAA7 133 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 SS18Q15532 418 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 FBXL19-AS1Q494R0 122 aa10.36□□□□□ -0.75
SCARF1-201ENST00000263071 HILS1P60008 231 aa10.35□□□□□ -0.75
SCARF1-201ENST00000263071 LINC00846Q9NV44 126 aa10.35□□□□□ -0.75
SCARF1-201ENST00000263071 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
SCARF1-201ENST00000263071 DEFB131AP59861 70 aa10.35□□□□□ -0.75
SCARF1-201ENST00000263071 U3KQE9 123 aa10.35□□□□□ -0.75
SCARF1-201ENST00000263071 MXRA5Q9NR99 2828 aa10.34□□□□□ -0.75
SCARF1-201ENST00000263071 NBEAL2Q6ZNJ1 2754 aa10.34□□□□□ -0.75
SCARF1-201ENST00000263071 C16orf95Q9H693 158 aa10.34□□□□□ -0.75
SCARF1-201ENST00000263071 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
SCARF1-201ENST00000263071 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
SCARF1-201ENST00000263071 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
SCARF1-201ENST00000263071 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
SCARF1-201ENST00000263071 MRPL53Q96EL3 112 aaKnown RBP10.33□□□□□ -0.76
SCARF1-201ENST00000263071 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
SCARF1-201ENST00000263071 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
SCARF1-201ENST00000263071 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
SCARF1-201ENST00000263071 DEFB112Q30KQ8 113 aa10.32□□□□□ -0.76
SCARF1-201ENST00000263071 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
SCARF1-201ENST00000263071 LITAFQ99732 161 aa10.32□□□□□ -0.76
SCARF1-201ENST00000263071 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
SCARF1-201ENST00000263071 SOCS3O14543 225 aa10.31□□□□□ -0.76
SCARF1-201ENST00000263071 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
SCARF1-201ENST00000263071 USMG5Q96IX5 58 aa10.31□□□□□ -0.76
SCARF1-201ENST00000263071 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
SCARF1-201ENST00000263071 LINC00315P59091 139 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 SNURFQ9Y675 71 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 TRBV7-6A0A0J9YX20 115 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 H7BZZ5 65 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 SLURP1P55000 103 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 FAM222AQ5U5X8 452 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 LENEPQ9Y5L5 61 aa10.3□□□□□ -0.76
SCARF1-201ENST00000263071 M0QY20 66 aa10.29□□□□□ -0.76
SCARF1-201ENST00000263071 MSMBP08118 114 aa10.29□□□□□ -0.76
SCARF1-201ENST00000263071 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
SCARF1-201ENST00000263071 A0A087WW49 117 aa10.29□□□□□ -0.76
SCARF1-201ENST00000263071 CFHR3Q02985 330 aa10.29□□□□□ -0.76
SCARF1-201ENST00000263071 IGSF10Q6WRI0 2623 aa10.28□□□□□ -0.76
SCARF1-201ENST00000263071 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
SCARF1-201ENST00000263071 F8WEM9 126 aa10.28□□□□□ -0.76
SCARF1-201ENST00000263071 CCKP06307 115 aa10.28□□□□□ -0.76
SCARF1-201ENST00000263071 KIF25-AS1Q9Y6Z4 181 aa10.28□□□□□ -0.76
SCARF1-201ENST00000263071 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.76
SCARF1-201ENST00000263071 EPM2AB3EWF7 344 aa10.27□□□□□ -0.77
SCARF1-201ENST00000263071 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
SCARF1-201ENST00000263071 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
SCARF1-201ENST00000263071 C20orf203Q8NBC4 194 aa10.26□□□□□ -0.77
SCARF1-201ENST00000263071 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
SCARF1-201ENST00000263071 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
SCARF1-201ENST00000263071 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
SCARF1-201ENST00000263071 KLLNB2CW77 178 aa10.25□□□□□ -0.77
SCARF1-201ENST00000263071 FAM19A1Q7Z5A9 133 aa10.25□□□□□ -0.77
SCARF1-201ENST00000263071 TMEM89A2RUT3 159 aa10.25□□□□□ -0.77
SCARF1-201ENST00000263071 LYPD5Q6UWN5 251 aa10.25□□□□□ -0.77
SCARF1-201ENST00000263071 DYNLRB2Q8TF09 96 aa10.25□□□□□ -0.77
SCARF1-201ENST00000263071 GCN1Q92616 2671 aaKnown RBP10.25□□□□□ -0.77
SCARF1-201ENST00000263071 Q8N2B8 174 aa10.24□□□□□ -0.77
SCARF1-201ENST00000263071 A6NDX4 124 aa10.24□□□□□ -0.77
SCARF1-201ENST00000263071 Q6ZSN1 163 aa10.24□□□□□ -0.77
SCARF1-201ENST00000263071 RMI2Q96E14 147 aa10.24□□□□□ -0.77
SCARF1-201ENST00000263071 FAM218AQ96MZ4 157 aa10.24□□□□□ -0.77
SCARF1-201ENST00000263071 C11orf68Q9H3H3 251 aaKnown RBP10.23□□□□□ -0.77
SCARF1-201ENST00000263071 Q96MF0 132 aa10.23□□□□□ -0.77
SCARF1-201ENST00000263071 TRGV1A0A0A0MS02 117 aa10.22□□□□□ -0.77
SCARF1-201ENST00000263071 PRB1P04280 392 aa10.21□□□□□ -0.77
SCARF1-201ENST00000263071 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
SCARF1-201ENST00000263071 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.77
SCARF1-201ENST00000263071 NCR3O14931 201 aa10.21□□□□□ -0.78
SCARF1-201ENST00000263071 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.78
SCARF1-201ENST00000263071 LINC00467Q9BRT7 94 aa10.21□□□□□ -0.78
SCARF1-201ENST00000263071 C22orf24Q9Y442 160 aa10.21□□□□□ -0.78
SCARF1-201ENST00000263071 FLNAP21333 2647 aaKnown RBP10.21□□□□□ -0.78
SCARF1-201ENST00000263071 TRAV7A0A075B6U4 112 aa10.2□□□□□ -0.78
SCARF1-201ENST00000263071 B4DSR2 109 aa10.2□□□□□ -0.78
SCARF1-201ENST00000263071 MRPL55Q7Z7F7 128 aaKnown RBP10.19□□□□□ -0.78
SCARF1-201ENST00000263071 CD164Q04900 197 aa10.19□□□□□ -0.78
SCARF1-201ENST00000263071 C9orf129Q5T035 196 aaKnown RBP10.19□□□□□ -0.78
SCARF1-201ENST00000263071 Q9H8V8 135 aa10.19□□□□□ -0.78
SCARF1-201ENST00000263071 K7EQG2 157 aa10.18□□□□□ -0.78
SCARF1-201ENST00000263071 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
SCARF1-201ENST00000263071 IGLV1-40P01703 118 aa10.17□□□□□ -0.78
SCARF1-201ENST00000263071 ATP5EP2Q5VTU8 51 aa10.17□□□□□ -0.78
SCARF1-201ENST00000263071 PAX4O43316 350 aa10.17□□□□□ -0.78
SCARF1-201ENST00000263071 UBL5Q9BZL1 73 aa10.17□□□□□ -0.78
SCARF1-201ENST00000263071 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms