RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 FAM19A3Q7Z5A8 133 aa10.73□□□□□ -0.69
XRCC1-201ENST00000262887 CRPP02741 224 aa10.72□□□□□ -0.69
XRCC1-201ENST00000262887 OVOL2Q9BRP0 275 aa10.72□□□□□ -0.69
XRCC1-201ENST00000262887 PTPN13Q12923 2485 aa10.72□□□□□ -0.69
XRCC1-201ENST00000262887 RS1O15537 224 aa10.71□□□□□ -0.69
XRCC1-201ENST00000262887 IGKV3D-7A0A0C4DH55 119 aa10.71□□□□□ -0.69
XRCC1-201ENST00000262887 C11orf72Q8NBR9 251 aa10.71□□□□□ -0.69
XRCC1-201ENST00000262887 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
XRCC1-201ENST00000262887 TMEM89A2RUT3 159 aa10.71□□□□□ -0.7
XRCC1-201ENST00000262887 IGHV4-59P01825 116 aa10.71□□□□□ -0.7
XRCC1-201ENST00000262887 MSMBP08118 114 aa10.71□□□□□ -0.7
XRCC1-201ENST00000262887 Q6JHZ5 121 aa10.71□□□□□ -0.7
XRCC1-201ENST00000262887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■■■■□ 23.6
XRCC1-201ENST00000262887 C10orf105Q8TEF2 133 aa10.7□□□□□ -0.7
XRCC1-201ENST00000262887 F8WDY8 70 aa10.7□□□□□ -0.7
XRCC1-201ENST00000262887 AVPP01185 164 aa10.7□□□□□ -0.7
XRCC1-201ENST00000262887 TLN2Q9Y4G6 2542 aa10.69□□□□□ -0.7
XRCC1-201ENST00000262887 A8MTW9 85 aa10.69□□□□□ -0.7
XRCC1-201ENST00000262887 C19orf84I3L1E1 186 aa10.69□□□□□ -0.7
XRCC1-201ENST00000262887 C9orf129Q5T035 196 aaKnown RBP10.69□□□□□ -0.7
XRCC1-201ENST00000262887 LINC00337Q8N6G1 96 aa10.69□□□□□ -0.7
XRCC1-201ENST00000262887 PRO0628Q9UI54 55 aa10.69□□□□□ -0.7
XRCC1-201ENST00000262887 HELZ2Q9BYK8 2649 aaKnown RBP10.69□□□□□ -0.7
XRCC1-201ENST00000262887 A0A087WYN8 130 aa10.69□□□□□ -0.7
XRCC1-201ENST00000262887 LINC00846Q9NV44 126 aa10.68□□□□□ -0.7
XRCC1-201ENST00000262887 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
XRCC1-201ENST00000262887 CREBBPQ92793 2442 aa10.67□□□□□ -0.7
XRCC1-201ENST00000262887 IGHV4-30-2A0A087WSY4 118 aa10.67□□□□□ -0.7
XRCC1-201ENST00000262887 J3QLI3 93 aa10.67□□□□□ -0.7
XRCC1-201ENST00000262887 IGKV2-28A0A075B6P5 120 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 A0A087WVE0 104 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 IGKV2D-28P01615 120 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 OBSCN-AS1Q96MR7 158 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 DEFB112Q30KQ8 113 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 MIR7-3HGQ8N6C7 128 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 DOPEY1Q5JWR5 2465 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 INSP01308 110 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 CDC42SE2Q9NRR3 84 aa10.66□□□□□ -0.7
XRCC1-201ENST00000262887 H0YGX0 51 aa10.65□□□□□ -0.7
XRCC1-201ENST00000262887 GNLYP22749 145 aa10.65□□□□□ -0.7
XRCC1-201ENST00000262887 SLURP1P55000 103 aa10.65□□□□□ -0.7
XRCC1-201ENST00000262887 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.7
XRCC1-201ENST00000262887 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.7
XRCC1-201ENST00000262887 Q96MF0 132 aa10.65□□□□□ -0.7
XRCC1-201ENST00000262887 CCL19Q99731 98 aa10.65□□□□□ -0.7
XRCC1-201ENST00000262887 PFN2P35080 140 aa10.65□□□□□ -0.71
XRCC1-201ENST00000262887 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.71
XRCC1-201ENST00000262887 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.71
XRCC1-201ENST00000262887 HECTD1Q9ULT8 2610 aa10.64□□□□□ -0.71
XRCC1-201ENST00000262887 USP17L23D6RBM5 183 aa10.64□□□□□ -0.71
XRCC1-201ENST00000262887 UBE2E2Q96LR5 201 aa10.64□□□□□ -0.71
XRCC1-201ENST00000262887 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
XRCC1-201ENST00000262887 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
XRCC1-201ENST00000262887 TRGV1A0A0A0MS02 117 aa10.63□□□□□ -0.71
XRCC1-201ENST00000262887 BBC3Q96PG8 261 aaPredicted RBP10.63□□□□□ -0.71
XRCC1-201ENST00000262887 FASNP49327 2511 aaKnown RBP10.63□□□□□ -0.71
XRCC1-201ENST00000262887 NDUFC2-KCTD14E9PQ53 114 aa10.63□□□□□ -0.71
XRCC1-201ENST00000262887 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
XRCC1-201ENST00000262887 MAP6D1Q9H9H5 199 aa10.63□□□□□ -0.71
XRCC1-201ENST00000262887 TOMM7Q9P0U1 55 aa10.63□□□□□ -0.71
XRCC1-201ENST00000262887 NOTCH2Q04721 2471 aa10.63□□□□□ -0.71
XRCC1-201ENST00000262887 K7EQD1 137 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 NCR3O14931 201 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 LECT2O14960 151 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 FHL2Q14192 279 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 C1orf43Q9BWL3 253 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 B4DSR2 109 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 COX7B2Q8TF08 81 aa10.62□□□□□ -0.71
XRCC1-201ENST00000262887 UBR5O95071 2799 aaPredicted RBP10.61□□□□□ -0.71
XRCC1-201ENST00000262887 UBE2L6O14933 153 aa10.61□□□□□ -0.71
XRCC1-201ENST00000262887 LINC00158P58513 81 aa10.61□□□□□ -0.71
XRCC1-201ENST00000262887 XCL2Q9UBD3 114 aa10.61□□□□□ -0.71
XRCC1-201ENST00000262887 NDUFC2O95298 119 aa10.61□□□□□ -0.71
XRCC1-201ENST00000262887 CSPG4Q6UVK1 2322 aa10.6□□□□□ -0.71
XRCC1-201ENST00000262887 TRBV10-1A0A0K0K1A3 114 aa10.6□□□□□ -0.71
XRCC1-201ENST00000262887 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
XRCC1-201ENST00000262887 ITPR2Q14571 2701 aa10.6□□□□□ -0.71
XRCC1-201ENST00000262887 CCL18P55774 89 aa10.59□□□□□ -0.71
XRCC1-201ENST00000262887 ANKRD17O75179 2603 aaKnown RBP10.59□□□□□ -0.71
XRCC1-201ENST00000262887 SLPIP03973 132 aa10.58□□□□□ -0.72
XRCC1-201ENST00000262887 DYNLRB2Q8TF09 96 aa10.58□□□□□ -0.72
XRCC1-201ENST00000262887 TMEM243Q9BU79 118 aa10.58□□□□□ -0.72
XRCC1-201ENST00000262887 RPL35AP18077 110 aaKnown RBP10.57□□□□□ -0.72
XRCC1-201ENST00000262887 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
XRCC1-201ENST00000262887 APCP25054 2843 aa10.57□□□□□ -0.72
XRCC1-201ENST00000262887 Q6ZTI0 123 aa10.57□□□□□ -0.72
XRCC1-201ENST00000262887 CCKP06307 115 aa10.56□□□□□ -0.72
XRCC1-201ENST00000262887 ZNF702PQ9H963 129 aa10.56□□□□□ -0.72
XRCC1-201ENST00000262887 ORMDL1Q9P0S3 153 aa10.56□□□□□ -0.72
XRCC1-201ENST00000262887 SONP18583 2426 aaKnown RBP10.56□□□□□ -0.72
XRCC1-201ENST00000262887 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
XRCC1-201ENST00000262887 EPM2AB3EWF7 344 aa10.55□□□□□ -0.72
XRCC1-201ENST00000262887 PAX4O43316 350 aa10.55□□□□□ -0.72
XRCC1-201ENST00000262887 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
XRCC1-201ENST00000262887 C1orf158Q8N1D5 194 aa10.55□□□□□ -0.72
XRCC1-201ENST00000262887 NAV2Q8IVL1 2488 aa10.55□□□□□ -0.72
XRCC1-201ENST00000262887 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
XRCC1-201ENST00000262887 S100A7L2Q5SY68 101 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms