RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 APOC3P02656 99 aa11.73□□□□□ -0.53
COPE-201ENST00000262812 CIRBPQ14011 172 aaKnown RBP11.73□□□□□ -0.53
COPE-201ENST00000262812 MAJINQ3KP22 176 aa11.73□□□□□ -0.53
COPE-201ENST00000262812 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
COPE-201ENST00000262812 APOMO95445 188 aa11.72□□□□□ -0.53
COPE-201ENST00000262812 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
COPE-201ENST00000262812 TMEM141Q96I45 108 aa11.72□□□□□ -0.53
COPE-201ENST00000262812 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.53
COPE-201ENST00000262812 K7EMI3 77 aa11.7□□□□□ -0.54
COPE-201ENST00000262812 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
COPE-201ENST00000262812 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
COPE-201ENST00000262812 Q6ZRU5 148 aa11.7□□□□□ -0.54
COPE-201ENST00000262812 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
COPE-201ENST00000262812 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
COPE-201ENST00000262812 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
COPE-201ENST00000262812 A0A096LNI7 61 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 TGIF2-C20orf24A0A0A6YYL0 155 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 IGHV3OR16-9A0A0B4J2B5 98 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 COX19Q49B96 90 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 Q6ZN92 141 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 VCX2Q9H322 139 aa11.69□□□□□ -0.54
COPE-201ENST00000262812 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
COPE-201ENST00000262812 KRTAP10-4P60372 401 aaPredicted RBP11.68□□□□□ -0.54
COPE-201ENST00000262812 NDUFA5Q16718 116 aa11.68□□□□□ -0.54
COPE-201ENST00000262812 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
COPE-201ENST00000262812 ORAOV1Q8WV07 137 aa11.68□□□□□ -0.54
COPE-201ENST00000262812 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
COPE-201ENST00000262812 STPG4Q8N801 248 aa11.67□□□□□ -0.54
COPE-201ENST00000262812 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
COPE-201ENST00000262812 SNAPINO95295 136 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 MT-ND6P03923 174 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 G0S2P27469 103 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 UBE2D1P51668 147 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 SVBPQ8N300 66 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 OR10D4PQ8NGN7 298 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 C2orf48Q96LS8 159 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 PLAC8Q9NZF1 115 aa11.66□□□□□ -0.54
COPE-201ENST00000262812 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
COPE-201ENST00000262812 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
COPE-201ENST00000262812 LINC00173Q6ZV60 143 aa11.65□□□□□ -0.54
COPE-201ENST00000262812 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
COPE-201ENST00000262812 AMELXQ99217 191 aa11.65□□□□□ -0.54
COPE-201ENST00000262812 LOC107984640A0A0U1RRK4 108 aa11.64□□□□□ -0.55
COPE-201ENST00000262812 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
COPE-201ENST00000262812 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
COPE-201ENST00000262812 TRAPPC1Q9Y5R8 145 aa11.64□□□□□ -0.55
COPE-201ENST00000262812 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
COPE-201ENST00000262812 A0A087WZ39 114 aa11.63□□□□□ -0.55
COPE-201ENST00000262812 FA2HQ7L5A8 372 aa11.63□□□□□ -0.55
COPE-201ENST00000262812 LINC00474Q9P2X8 69 aa11.63□□□□□ -0.55
COPE-201ENST00000262812 HERC1Q15751 4861 aa11.62□□□□□ -0.55
COPE-201ENST00000262812 NPSP0C0P6 89 aa11.62□□□□□ -0.55
COPE-201ENST00000262812 PTTG1IPP53801 180 aa11.61□□□□□ -0.55
COPE-201ENST00000262812 PAPPA-AS1Q5QFB9 102 aa11.61□□□□□ -0.55
COPE-201ENST00000262812 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
COPE-201ENST00000262812 UNQ6190/PRO20217Q6UXQ8 127 aa11.61□□□□□ -0.55
COPE-201ENST00000262812 TIMM17AQ99595 171 aa11.61□□□□□ -0.55
COPE-201ENST00000262812 SMCO4Q9NRQ5 59 aa11.61□□□□□ -0.55
COPE-201ENST00000262812 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
COPE-201ENST00000262812 NDUFA1O15239 70 aa11.6□□□□□ -0.55
COPE-201ENST00000262812 RPL18AQ02543 176 aaKnown RBP11.6□□□□□ -0.55
COPE-201ENST00000262812 ERASQ7Z444 233 aa11.6□□□□□ -0.55
COPE-201ENST00000262812 C7orf33Q8WU49 177 aa11.6□□□□□ -0.55
COPE-201ENST00000262812 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
COPE-201ENST00000262812 J3QL48 77 aa11.59□□□□□ -0.55
COPE-201ENST00000262812 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
COPE-201ENST00000262812 F8WDY8 70 aa11.58□□□□□ -0.56
COPE-201ENST00000262812 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
COPE-201ENST00000262812 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
COPE-201ENST00000262812 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
COPE-201ENST00000262812 GEMIN7Q9H840 131 aaKnown RBP11.57□□□□□ -0.56
COPE-201ENST00000262812 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
COPE-201ENST00000262812 FAM19A3Q7Z5A8 133 aa11.56□□□□□ -0.56
COPE-201ENST00000262812 SLC7A5P1Q8MH63 180 aa11.56□□□□□ -0.56
COPE-201ENST00000262812 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
COPE-201ENST00000262812 C6orf48Q9UBA6 75 aa11.56□□□□□ -0.56
COPE-201ENST00000262812 A0A1W2PNN7 141 aa11.55□□□□□ -0.56
COPE-201ENST00000262812 SEC11AP67812 179 aa11.55□□□□□ -0.56
COPE-201ENST00000262812 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
COPE-201ENST00000262812 C18orf32Q8TCD1 76 aa11.55□□□□□ -0.56
COPE-201ENST00000262812 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
COPE-201ENST00000262812 PRSS2P07478 247 aa11.54□□□□□ -0.56
COPE-201ENST00000262812 LINC00614P0C842 121 aa11.54□□□□□ -0.56
COPE-201ENST00000262812 HERVK_113P63121 156 aa11.54□□□□□ -0.56
COPE-201ENST00000262812 PKHD1L1Q86WI1 4243 aa11.54□□□□□ -0.56
COPE-201ENST00000262812 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
COPE-201ENST00000262812 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
COPE-201ENST00000262812 C6orf226Q5I0X4 101 aa11.53□□□□□ -0.56
COPE-201ENST00000262812 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
COPE-201ENST00000262812 PACRGQ96M98 296 aaPredicted RBP11.53□□□□□ -0.56
COPE-201ENST00000262812 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
COPE-201ENST00000262812 CST9LQ9H4G1 147 aa11.53□□□□□ -0.56
COPE-201ENST00000262812 PMCHL1Q16048 86 aa11.52□□□□□ -0.57
COPE-201ENST00000262812 GAGE2EQ4V326 116 aa11.52□□□□□ -0.57
COPE-201ENST00000262812 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
COPE-201ENST00000262812 Q6ZRP5 223 aa11.52□□□□□ -0.57
COPE-201ENST00000262812 CBLN2Q8IUK8 224 aa11.52□□□□□ -0.57
COPE-201ENST00000262812 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.57
COPE-201ENST00000262812 GAGE2DQ9UEU5 116 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms