RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 MAPKAPK5-AS1Q8N8E1 139 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 CCL18P55774 89 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 C2orf91Q6ZV80 131 aa8.86□□□□□ -0.99
VAMP7-201ENST00000262640 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 CTAG1AP78358 180 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 PRR34Q9NV39 138 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 KLK12Q9UKR0 248 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 TRAV8-3A0A0A6YYJ7 113 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 IGHV3OR16-9A0A0B4J2B5 98 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 ZNF815PA8K554 130 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 LINC01556Q5JQF7 62 aa8.85□□□□□ -0.99
VAMP7-201ENST00000262640 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
VAMP7-201ENST00000262640 NUPR2A6NF83 97 aa8.84□□□□□ -0.99
VAMP7-201ENST00000262640 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
VAMP7-201ENST00000262640 SMIM1B2RUZ4 78 aa8.83□□□□□ -1
VAMP7-201ENST00000262640 HIGD1BQ9P298 99 aa8.83□□□□□ -1
VAMP7-201ENST00000262640 XCL1P47992 114 aa8.83□□□□□ -1
VAMP7-201ENST00000262640 A0A087WZ39 114 aa8.82□□□□□ -1
VAMP7-201ENST00000262640 CRPP02741 224 aa8.82□□□□□ -1
VAMP7-201ENST00000262640 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
VAMP7-201ENST00000262640 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
VAMP7-201ENST00000262640 KLK5Q9Y337 293 aaPredicted RBP8.82□□□□□ -1
VAMP7-201ENST00000262640 CD164L2Q6UWJ8 174 aa8.82□□□□□ -1
VAMP7-201ENST00000262640 ENHOQ6UWT2 76 aa8.82□□□□□ -1
VAMP7-201ENST00000262640 APLNQ9ULZ1 77 aa8.82□□□□□ -1
VAMP7-201ENST00000262640 DYNC2H1Q8NCM8 4307 aaKnown RBP8.82□□□□□ -1
VAMP7-201ENST00000262640 UPK3BQ9BT76 320 aa8.81□□□□□ -1
VAMP7-201ENST00000262640 LINC01561Q8N1V8 128 aa8.81□□□□□ -1
VAMP7-201ENST00000262640 UBE2WQ96B02 151 aa8.81□□□□□ -1
VAMP7-201ENST00000262640 TRAV8-4A0A0B4J246 113 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 ZFAND6Q6FIF0 208 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 C5orf38Q86SI9 138 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 IGLV10-54A0A075B6I4 117 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 M0R143 59 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 MIAQ16674 131 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
VAMP7-201ENST00000262640 COX7A2LO14548 114 aa8.79□□□□□ -1
VAMP7-201ENST00000262640 HSD52Q0P140 79 aa8.78□□□□□ -1
VAMP7-201ENST00000262640 FOXI1Q12951 378 aa8.78□□□□□ -1
VAMP7-201ENST00000262640 SNHG12Q9BXW3 62 aa8.78□□□□□ -1
VAMP7-201ENST00000262640 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
VAMP7-201ENST00000262640 NDUFA1O15239 70 aa8.77□□□□□ -1.01
VAMP7-201ENST00000262640 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
VAMP7-201ENST00000262640 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
VAMP7-201ENST00000262640 C10orf126Q8N4M7 172 aa8.77□□□□□ -1.01
VAMP7-201ENST00000262640 EREGO14944 169 aa8.76□□□□□ -1.01
VAMP7-201ENST00000262640 DNAH7Q8WXX0 4024 aa8.76□□□□□ -1.01
VAMP7-201ENST00000262640 A0A0J9YXY3 114 aa8.76□□□□□ -1.01
VAMP7-201ENST00000262640 MALP21145 153 aa8.76□□□□□ -1.01
VAMP7-201ENST00000262640 TAL2Q16559 108 aa8.76□□□□□ -1.01
VAMP7-201ENST00000262640 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
VAMP7-201ENST00000262640 FBN3Q75N90 2809 aa8.75□□□□□ -1.01
VAMP7-201ENST00000262640 BATFQ16520 125 aa8.75□□□□□ -1.01
VAMP7-201ENST00000262640 BVES-AS1Q5T3Y7 98 aa8.75□□□□□ -1.01
VAMP7-201ENST00000262640 Q9H8V8 135 aa8.75□□□□□ -1.01
VAMP7-201ENST00000262640 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
VAMP7-201ENST00000262640 IBA57-AS1B1ANH7 110 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 K7EP13 123 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
VAMP7-201ENST00000262640 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
VAMP7-201ENST00000262640 APOMO95445 188 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 HERV-K104P63124 156 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 Q8IZM0 81 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
VAMP7-201ENST00000262640 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
VAMP7-201ENST00000262640 PRSS2P07478 247 aa8.73□□□□□ -1.01
VAMP7-201ENST00000262640 SFTA2Q6UW10 78 aa8.73□□□□□ -1.01
VAMP7-201ENST00000262640 SRSF9Q13242 221 aaKnown RBP eCLIP8.73□□□□□ -1.01
VAMP7-201ENST00000262640 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
VAMP7-201ENST00000262640 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
VAMP7-201ENST00000262640 ORAOV1Q8WV07 137 aa8.73□□□□□ -1.01
VAMP7-201ENST00000262640 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
VAMP7-201ENST00000262640 CEND1Q8N111 149 aa8.72□□□□□ -1.01
VAMP7-201ENST00000262640 TIMM17BO60830 172 aa8.72□□□□□ -1.01
VAMP7-201ENST00000262640 GCSHP23434 173 aa8.72□□□□□ -1.01
VAMP7-201ENST00000262640 TM2D2Q9BX73 214 aa8.72□□□□□ -1.01
VAMP7-201ENST00000262640 IGKV2D-24A0A075B6R9 120 aa8.71□□□□□ -1.01
VAMP7-201ENST00000262640 CFAP161Q6P656 301 aa8.71□□□□□ -1.02
VAMP7-201ENST00000262640 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
VAMP7-201ENST00000262640 RMI2Q96E14 147 aa8.71□□□□□ -1.02
VAMP7-201ENST00000262640 LITAFQ99732 161 aa8.71□□□□□ -1.02
VAMP7-201ENST00000262640 Q9HAA7 133 aa8.71□□□□□ -1.02
VAMP7-201ENST00000262640 CXCL5P42830 114 aa8.7□□□□□ -1.02
VAMP7-201ENST00000262640 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
VAMP7-201ENST00000262640 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
VAMP7-201ENST00000262640 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
VAMP7-201ENST00000262640 PLECQ15149 4684 aaKnown RBP8.69□□□□□ -1.02
VAMP7-201ENST00000262640 Q6ZVH6 145 aa8.69□□□□□ -1.02
VAMP7-201ENST00000262640 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
VAMP7-201ENST00000262640 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
VAMP7-201ENST00000262640 FXYD2P54710 66 aa8.69□□□□□ -1.02
VAMP7-201ENST00000262640 CKS1BP61024 79 aa8.69□□□□□ -1.02
VAMP7-201ENST00000262640 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms