RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 EPPK1P58107 5090 aaKnown RBP10.94□□□□□ -0.66
CHCHD3-201ENST00000262570 USP17L23D6RBM5 183 aa10.94□□□□□ -0.66
CHCHD3-201ENST00000262570 EREGO14944 169 aa10.94□□□□□ -0.66
CHCHD3-201ENST00000262570 COX6A2Q02221 97 aa10.93□□□□□ -0.66
CHCHD3-201ENST00000262570 Q8N814 137 aa10.93□□□□□ -0.66
CHCHD3-201ENST00000262570 A0A0J9YXV3 536 aa10.92□□□□□ -0.66
CHCHD3-201ENST00000262570 COX7A2LO14548 114 aa10.92□□□□□ -0.66
CHCHD3-201ENST00000262570 PRSS1P07477 247 aa10.92□□□□□ -0.66
CHCHD3-201ENST00000262570 SEC11AP67812 179 aa10.92□□□□□ -0.66
CHCHD3-201ENST00000262570 FABP4P15090 132 aa10.91□□□□□ -0.66
CHCHD3-201ENST00000262570 C5orf38Q86SI9 138 aa10.91□□□□□ -0.66
CHCHD3-201ENST00000262570 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
CHCHD3-201ENST00000262570 DNAH5Q8TE73 4624 aa10.91□□□□□ -0.66
CHCHD3-201ENST00000262570 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
CHCHD3-201ENST00000262570 CFAP161Q6P656 301 aa10.9□□□□□ -0.66
CHCHD3-201ENST00000262570 C15orf56Q8N910 161 aa10.9□□□□□ -0.66
CHCHD3-201ENST00000262570 PKHD1P08F94 4074 aa10.9□□□□□ -0.67
CHCHD3-201ENST00000262570 TINCRA0A1B0GVN0 87 aa10.9□□□□□ -0.67
CHCHD3-201ENST00000262570 KRTAP10-2P60368 255 aa10.9□□□□□ -0.67
CHCHD3-201ENST00000262570 HERVK_113P63121 156 aa10.9□□□□□ -0.67
CHCHD3-201ENST00000262570 A0A087WZ39 114 aa10.89□□□□□ -0.67
CHCHD3-201ENST00000262570 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
CHCHD3-201ENST00000262570 MALP21145 153 aa10.89□□□□□ -0.67
CHCHD3-201ENST00000262570 SPATA12Q7Z6I5 190 aa10.89□□□□□ -0.67
CHCHD3-201ENST00000262570 PACRGQ96M98 296 aaPredicted RBP10.89□□□□□ -0.67
CHCHD3-201ENST00000262570 GEMIN7Q9H840 131 aaKnown RBP10.89□□□□□ -0.67
CHCHD3-201ENST00000262570 IGHV1-58A0A0C4DH39 117 aa10.88□□□□□ -0.67
CHCHD3-201ENST00000262570 IGLV4-69A0A075B6H9 119 aa10.87□□□□□ -0.67
CHCHD3-201ENST00000262570 IGLC3P0DOY3 106 aa10.87□□□□□ -0.67
CHCHD3-201ENST00000262570 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
CHCHD3-201ENST00000262570 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
CHCHD3-201ENST00000262570 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 IGLV5-45A0A087WSX0 123 aa10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 GVQW2A0A096LPI5 108 aaPredicted RBP10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 S100A6P06703 90 aa10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 hDV102S1A0JD36 115 aa10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 APOMO95445 188 aa10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 LINC01561Q8N1V8 128 aa10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 CHTOPQ9Y3Y2 248 aaKnown RBP10.86□□□□□ -0.67
CHCHD3-201ENST00000262570 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHCHD3-201ENST00000262570 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
CHCHD3-201ENST00000262570 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
CHCHD3-201ENST00000262570 MAP1LC3CQ9BXW4 147 aa10.85□□□□□ -0.67
CHCHD3-201ENST00000262570 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 F8VRH5 84 aa10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 H0Y8G0 127 aa10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 ODF1Q14990 250 aa10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 CDPF1Q6NVV7 123 aa10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 MRPL35Q9NZE8 188 aaKnown RBP10.84□□□□□ -0.67
CHCHD3-201ENST00000262570 C11orf86A6NJI1 115 aa10.83□□□□□ -0.68
CHCHD3-201ENST00000262570 SLPIP03973 132 aa10.83□□□□□ -0.68
CHCHD3-201ENST00000262570 HIST3H2BBQ8N257 126 aa10.83□□□□□ -0.68
CHCHD3-201ENST00000262570 OR10D4PQ8NGN7 298 aa10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 IGLV5-52A0A0A0MRZ9 124 aa10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 ZNF561-AS1K7EIQ3 104 aa10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 ZNF22P17026 224 aaPredicted RBP10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 SNRPEP62304 92 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 CNBPP62633 177 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 ORAOV1Q8WV07 137 aa10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 LINC00526Q96FQ7 95 aa10.82□□□□□ -0.68
CHCHD3-201ENST00000262570 LRP1BQ9NZR2 4599 aa10.81□□□□□ -0.68
CHCHD3-201ENST00000262570 C5orf52A6NGY3 159 aa10.81□□□□□ -0.68
CHCHD3-201ENST00000262570 SYS1-DBNDD2H3BUS1 97 aa10.81□□□□□ -0.68
CHCHD3-201ENST00000262570 SMIM1B2RUZ4 78 aa10.8□□□□□ -0.68
CHCHD3-201ENST00000262570 H3BRM9 83 aa10.8□□□□□ -0.68
CHCHD3-201ENST00000262570 SPAG11BQ08648 103 aa10.8□□□□□ -0.68
CHCHD3-201ENST00000262570 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
CHCHD3-201ENST00000262570 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
CHCHD3-201ENST00000262570 S100A2P29034 98 aa10.79□□□□□ -0.68
CHCHD3-201ENST00000262570 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
CHCHD3-201ENST00000262570 HIST1H2BLQ99880 126 aa10.79□□□□□ -0.68
CHCHD3-201ENST00000262570 C16orf90A8MZG2 172 aa10.78□□□□□ -0.68
CHCHD3-201ENST00000262570 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
CHCHD3-201ENST00000262570 PET117Q6UWS5 81 aa10.78□□□□□ -0.68
CHCHD3-201ENST00000262570 C2orf48Q96LS8 159 aa10.78□□□□□ -0.68
CHCHD3-201ENST00000262570 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.68
CHCHD3-201ENST00000262570 SPINK8P0C7L1 97 aa10.77□□□□□ -0.68
CHCHD3-201ENST00000262570 C9orf163Q8N9P6 203 aa10.77□□□□□ -0.68
CHCHD3-201ENST00000262570 PMCHL2Q9BQD1 86 aa10.77□□□□□ -0.68
CHCHD3-201ENST00000262570 GCSHP23434 173 aa10.77□□□□□ -0.69
CHCHD3-201ENST00000262570 PLNP26678 52 aa10.77□□□□□ -0.69
CHCHD3-201ENST00000262570 DPM2O94777 84 aa10.76□□□□□ -0.69
CHCHD3-201ENST00000262570 KRTDAPP60985 99 aa10.76□□□□□ -0.69
CHCHD3-201ENST00000262570 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
CHCHD3-201ENST00000262570 Q8IZM0 81 aa10.76□□□□□ -0.69
CHCHD3-201ENST00000262570 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
CHCHD3-201ENST00000262570 IGLV5-39A0A0G2JS06 123 aa10.75□□□□□ -0.69
CHCHD3-201ENST00000262570 F8WDY8 70 aa10.75□□□□□ -0.69
CHCHD3-201ENST00000262570 SYCNQ0VAF6 134 aa10.75□□□□□ -0.69
CHCHD3-201ENST00000262570 LINC01620Q4KN68 170 aa10.75□□□□□ -0.69
CHCHD3-201ENST00000262570 CAMK2N2Q96S95 79 aa10.75□□□□□ -0.69
CHCHD3-201ENST00000262570 TOMM7Q9P0U1 55 aa10.75□□□□□ -0.69
CHCHD3-201ENST00000262570 IGKCP01834 107 aa10.74□□□□□ -0.69
CHCHD3-201ENST00000262570 PRSS2P07478 247 aa10.74□□□□□ -0.69
CHCHD3-201ENST00000262570 C6orf226Q5I0X4 101 aa10.74□□□□□ -0.69
CHCHD3-201ENST00000262570 Q6ZRU5 148 aa10.74□□□□□ -0.69
CHCHD3-201ENST00000262570 TMEM223A0PJW6 202 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms