RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 RPL13AP40429 203 aaKnown RBP10.44□□□□□ -0.74
FOXF1-201ENST00000262426 GAGE2AQ6NT46 116 aa10.44□□□□□ -0.74
FOXF1-201ENST00000262426 C19orf73Q9NVV2 129 aa10.43□□□□□ -0.74
FOXF1-201ENST00000262426 SDHAF1A6NFY7 115 aa10.43□□□□□ -0.74
FOXF1-201ENST00000262426 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
FOXF1-201ENST00000262426 LINC01546A6NGU7 62 aa10.42□□□□□ -0.74
FOXF1-201ENST00000262426 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
FOXF1-201ENST00000262426 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
FOXF1-201ENST00000262426 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
FOXF1-201ENST00000262426 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 A8MTW9 85 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 RHOHQ15669 191 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 C3orf22Q8N5N4 141 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 J3KT08 172 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 M0QY20 66 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 Q6Q795 121 aa10.41□□□□□ -0.74
FOXF1-201ENST00000262426 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
FOXF1-201ENST00000262426 Q6ZTI0 123 aa10.4□□□□□ -0.75
FOXF1-201ENST00000262426 M0R2P5 195 aa10.39□□□□□ -0.75
FOXF1-201ENST00000262426 ZNF415Q09FC8 603 aa10.39□□□□□ -0.75
FOXF1-201ENST00000262426 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
FOXF1-201ENST00000262426 NOP10Q9NPE3 64 aaKnown RBP10.39□□□□□ -0.75
FOXF1-201ENST00000262426 IGKV3D-7A0A0C4DH55 119 aa10.38□□□□□ -0.75
FOXF1-201ENST00000262426 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
FOXF1-201ENST00000262426 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
FOXF1-201ENST00000262426 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
FOXF1-201ENST00000262426 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
FOXF1-201ENST00000262426 A0A087WVE0 104 aa10.37□□□□□ -0.75
FOXF1-201ENST00000262426 COX6CP09669 75 aa10.37□□□□□ -0.75
FOXF1-201ENST00000262426 F5H768 121 aa10.36□□□□□ -0.75
FOXF1-201ENST00000262426 AMELXQ99217 191 aa10.36□□□□□ -0.75
FOXF1-201ENST00000262426 I3L3M4 83 aa10.36□□□□□ -0.75
FOXF1-201ENST00000262426 DEFB4AO15263 64 aa10.36□□□□□ -0.75
FOXF1-201ENST00000262426 OR13C6PQ8NH95 151 aa10.35□□□□□ -0.75
FOXF1-201ENST00000262426 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
FOXF1-201ENST00000262426 VCYO14598 125 aa10.34□□□□□ -0.75
FOXF1-201ENST00000262426 CIRBPQ14011 172 aaKnown RBP10.34□□□□□ -0.75
FOXF1-201ENST00000262426 KRTAP24-1Q3LI83 254 aa10.34□□□□□ -0.75
FOXF1-201ENST00000262426 UQCRQO14949 82 aa10.33□□□□□ -0.76
FOXF1-201ENST00000262426 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
FOXF1-201ENST00000262426 ANK2Q01484 3957 aa10.33□□□□□ -0.76
FOXF1-201ENST00000262426 OXLD1Q5BKU9 147 aa10.33□□□□□ -0.76
FOXF1-201ENST00000262426 Q9HAA7 133 aa10.33□□□□□ -0.76
FOXF1-201ENST00000262426 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
FOXF1-201ENST00000262426 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
FOXF1-201ENST00000262426 OXTP01178 125 aa10.32□□□□□ -0.76
FOXF1-201ENST00000262426 CSNK1G2-AS1Q8NCQ2 148 aa10.32□□□□□ -0.76
FOXF1-201ENST00000262426 PKIGQ9Y2B9 76 aa10.32□□□□□ -0.76
FOXF1-201ENST00000262426 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
FOXF1-201ENST00000262426 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
FOXF1-201ENST00000262426 A0A1B0GX51 115 aa10.31□□□□□ -0.76
FOXF1-201ENST00000262426 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
FOXF1-201ENST00000262426 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
FOXF1-201ENST00000262426 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 PPP1R17O96001 155 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 PLAC8L1A1L4L8 177 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 TRACP01848 142 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 DEFB135Q30KP9 77 aa10.3□□□□□ -0.76
FOXF1-201ENST00000262426 DAZ2Q13117 558 aaKnown RBP10.29□□□□□ -0.76
FOXF1-201ENST00000262426 C9orf66Q5T8R8 295 aa10.29□□□□□ -0.76
FOXF1-201ENST00000262426 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
FOXF1-201ENST00000262426 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
FOXF1-201ENST00000262426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
FOXF1-201ENST00000262426 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
FOXF1-201ENST00000262426 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
FOXF1-201ENST00000262426 LINC00526Q96FQ7 95 aa10.29□□□□□ -0.76
FOXF1-201ENST00000262426 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
FOXF1-201ENST00000262426 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
FOXF1-201ENST00000262426 LEPROTO15243 131 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 PAPPA-AS1Q5QFB9 102 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 NDUFA12Q9UI09 145 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 COX7CP15954 63 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
FOXF1-201ENST00000262426 PRIMA1Q86XR5 153 aa10.27□□□□□ -0.77
FOXF1-201ENST00000262426 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
FOXF1-201ENST00000262426 LST1O00453 97 aa10.27□□□□□ -0.77
FOXF1-201ENST00000262426 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
FOXF1-201ENST00000262426 H3BT86 120 aa10.26□□□□□ -0.77
FOXF1-201ENST00000262426 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
FOXF1-201ENST00000262426 MGAM2Q2M2H8 2515 aa10.25□□□□□ -0.77
FOXF1-201ENST00000262426 C20orf203Q8NBC4 194 aa10.25□□□□□ -0.77
FOXF1-201ENST00000262426 IL17DQ8TAD2 202 aa10.24□□□□□ -0.77
FOXF1-201ENST00000262426 LINC00467Q9BRT7 94 aa10.24□□□□□ -0.77
FOXF1-201ENST00000262426 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
FOXF1-201ENST00000262426 TIRAPP58753 221 aa10.24□□□□□ -0.77
FOXF1-201ENST00000262426 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
FOXF1-201ENST00000262426 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
FOXF1-201ENST00000262426 TENM3Q9P273 2699 aa10.23□□□□□ -0.77
FOXF1-201ENST00000262426 TINCRA0A1B0GVN0 87 aa10.23□□□□□ -0.77
FOXF1-201ENST00000262426 C14orf132Q9NPU4 83 aa10.23□□□□□ -0.77
FOXF1-201ENST00000262426 A0A096LPF7 62 aa10.22□□□□□ -0.77
FOXF1-201ENST00000262426 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
FOXF1-201ENST00000262426 LINC00643Q86TS7 51 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms