RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
VSX2-201ENST00000261980 H3BUX3 64 aa11.91□□□□□ -0.5
VSX2-201ENST00000261980 PIMREGQ9BSJ6 248 aa11.91□□□□□ -0.5
VSX2-201ENST00000261980 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
VSX2-201ENST00000261980 IGHV3-53P01767 116 aa11.91□□□□□ -0.5
VSX2-201ENST00000261980 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
VSX2-201ENST00000261980 LECT2O14960 151 aa11.9□□□□□ -0.5
VSX2-201ENST00000261980 FHL2Q14192 279 aa11.9□□□□□ -0.5
VSX2-201ENST00000261980 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.5
VSX2-201ENST00000261980 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
VSX2-201ENST00000261980 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
VSX2-201ENST00000261980 LINC00337Q8N6G1 96 aa11.89□□□□□ -0.51
VSX2-201ENST00000261980 C19orf84I3L1E1 186 aa11.89□□□□□ -0.51
VSX2-201ENST00000261980 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
VSX2-201ENST00000261980 BAHCC1Q9P281 2608 aa11.89□□□□□ -0.51
VSX2-201ENST00000261980 CXCL5P42830 114 aa11.88□□□□□ -0.51
VSX2-201ENST00000261980 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
VSX2-201ENST00000261980 ABCA2Q9BZC7 2435 aa11.88□□□□□ -0.51
VSX2-201ENST00000261980 CRPP02741 224 aa11.87□□□□□ -0.51
VSX2-201ENST00000261980 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
VSX2-201ENST00000261980 PFN2P35080 140 aa11.87□□□□□ -0.51
VSX2-201ENST00000261980 C20orf197Q8N268 126 aa11.87□□□□□ -0.51
VSX2-201ENST00000261980 MIR7-3HGQ8N6C7 128 aa11.87□□□□□ -0.51
VSX2-201ENST00000261980 FN1P02751 2386 aaKnown RBP11.86□□□□□ -0.51
VSX2-201ENST00000261980 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
VSX2-201ENST00000261980 Q5XG85 94 aa11.86□□□□□ -0.51
VSX2-201ENST00000261980 FAM19A1Q7Z5A9 133 aa11.86□□□□□ -0.51
VSX2-201ENST00000261980 AKAP9Q99996 3911 aa11.85□□□□□ -0.51
VSX2-201ENST00000261980 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
VSX2-201ENST00000261980 TMEM258P61165 79 aa11.85□□□□□ -0.51
VSX2-201ENST00000261980 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
VSX2-201ENST00000261980 APCP25054 2843 aa11.84□□□□□ -0.51
VSX2-201ENST00000261980 LINC00158P58513 81 aa11.84□□□□□ -0.51
VSX2-201ENST00000261980 UPK3BQ9BT76 320 aa11.84□□□□□ -0.51
VSX2-201ENST00000261980 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
VSX2-201ENST00000261980 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
VSX2-201ENST00000261980 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
VSX2-201ENST00000261980 TIMM17BO60830 172 aa11.83□□□□□ -0.52
VSX2-201ENST00000261980 GHRHP01286 108 aa11.83□□□□□ -0.52
VSX2-201ENST00000261980 NAV2Q8IVL1 2488 aa11.83□□□□□ -0.52
VSX2-201ENST00000261980 RPL28P46779 137 aaKnown RBP11.83□□□□□ -0.52
VSX2-201ENST00000261980 DEFB131AP59861 70 aa11.82□□□□□ -0.52
VSX2-201ENST00000261980 RPS28P62857 69 aaKnown RBP11.82□□□□□ -0.52
VSX2-201ENST00000261980 Q96MF0 132 aa11.82□□□□□ -0.52
VSX2-201ENST00000261980 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
VSX2-201ENST00000261980 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
VSX2-201ENST00000261980 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
VSX2-201ENST00000261980 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
VSX2-201ENST00000261980 USMG5Q96IX5 58 aa11.81□□□□□ -0.52
VSX2-201ENST00000261980 LMO4P61968 165 aa11.81□□□□□ -0.52
VSX2-201ENST00000261980 PKIGQ9Y2B9 76 aa11.81□□□□□ -0.52
VSX2-201ENST00000261980 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
VSX2-201ENST00000261980 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
VSX2-201ENST00000261980 KHDC1LQ5JSQ8 128 aa11.8□□□□□ -0.52
VSX2-201ENST00000261980 TEX15Q9BXT5 2789 aa11.8□□□□□ -0.52
VSX2-201ENST00000261980 PAX4O43316 350 aa11.8□□□□□ -0.52
VSX2-201ENST00000261980 ACANP16112 2415 aa11.8□□□□□ -0.52
VSX2-201ENST00000261980 KLK9Q2XQG4 91 aa11.79□□□□□ -0.52
VSX2-201ENST00000261980 DEFB136Q30KP8 78 aa11.79□□□□□ -0.52
VSX2-201ENST00000261980 TMEM243Q9BU79 118 aa11.79□□□□□ -0.52
VSX2-201ENST00000261980 ZNF469Q96JG9 3925 aaPredicted RBP11.79□□□□□ -0.52
VSX2-201ENST00000261980 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
VSX2-201ENST00000261980 IGLV5-39A0A0G2JS06 123 aa11.78□□□□□ -0.52
VSX2-201ENST00000261980 K7EQG2 157 aa11.77□□□□□ -0.52
VSX2-201ENST00000261980 WFDC11Q8NEX6 87 aa11.77□□□□□ -0.52
VSX2-201ENST00000261980 UBE2E2Q96LR5 201 aa11.77□□□□□ -0.52
VSX2-201ENST00000261980 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
VSX2-201ENST00000261980 MXRA5Q9NR99 2828 aa11.77□□□□□ -0.53
VSX2-201ENST00000261980 FAM222AQ5U5X8 452 aa11.76□□□□□ -0.53
VSX2-201ENST00000261980 LINC00336Q6ZUF6 198 aa11.76□□□□□ -0.53
VSX2-201ENST00000261980 SNURFQ9Y675 71 aa11.76□□□□□ -0.53
VSX2-201ENST00000261980 TRAV13-2A0A0B4J235 113 aa11.75□□□□□ -0.53
VSX2-201ENST00000261980 Q6JHZ5 121 aa11.75□□□□□ -0.53
VSX2-201ENST00000261980 XCL2Q9UBD3 114 aa11.75□□□□□ -0.53
VSX2-201ENST00000261980 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
VSX2-201ENST00000261980 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
VSX2-201ENST00000261980 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
VSX2-201ENST00000261980 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
VSX2-201ENST00000261980 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
VSX2-201ENST00000261980 Q6ZTI0 123 aa11.73□□□□□ -0.53
VSX2-201ENST00000261980 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
VSX2-201ENST00000261980 PLA2G2AP14555 144 aa11.73□□□□□ -0.53
VSX2-201ENST00000261980 CCL18P55774 89 aa11.73□□□□□ -0.53
VSX2-201ENST00000261980 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
VSX2-201ENST00000261980 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
VSX2-201ENST00000261980 NF1P21359 2839 aa11.73□□□□□ -0.53
VSX2-201ENST00000261980 WIPF1O43516 503 aa11.72□□□□□ -0.53
VSX2-201ENST00000261980 MTORP42345 2549 aa11.72□□□□□ -0.53
VSX2-201ENST00000261980 C18orf65Q6ZTR6 163 aa11.71□□□□□ -0.54
VSX2-201ENST00000261980 COPS9Q8WXC6 57 aa11.71□□□□□ -0.54
VSX2-201ENST00000261980 A0A0U1RQV1 116 aa11.7□□□□□ -0.54
VSX2-201ENST00000261980 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
VSX2-201ENST00000261980 IGHV4-61A0A0C4DH41 118 aa11.7□□□□□ -0.54
VSX2-201ENST00000261980 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
VSX2-201ENST00000261980 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
VSX2-201ENST00000261980 IGLV1-40P01703 118 aa11.69□□□□□ -0.54
VSX2-201ENST00000261980 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
VSX2-201ENST00000261980 UBE2L6O14933 153 aa11.68□□□□□ -0.54
VSX2-201ENST00000261980 SLURP1P55000 103 aa11.68□□□□□ -0.54
VSX2-201ENST00000261980 FAM236DA0A1B0GTK5 79 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms