RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 CDIP1Q9H305 208 aa13.58□□□□□ -0.24
LPCAT3-201ENST00000261407 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 TRBV30A0A0K0K1B3 111 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 F5H768 121 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 CMC4P56277 68 aaPredicted RBP13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 ICOSQ9Y6W8 199 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 UBE2L6O14933 153 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 PPDPFLQ8WWR9 84 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 OVOL2Q9BRP0 275 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
LPCAT3-201ENST00000261407 FAM19A3Q7Z5A8 133 aa13.56□□□□□ -0.24
LPCAT3-201ENST00000261407 FAM110AQ9BQ89 295 aa13.56□□□□□ -0.24
LPCAT3-201ENST00000261407 TENM1Q9UKZ4 2725 aa13.56□□□□□ -0.24
LPCAT3-201ENST00000261407 GAGE6Q13070 117 aa13.56□□□□□ -0.24
LPCAT3-201ENST00000261407 FHL2Q14192 279 aa13.56□□□□□ -0.24
LPCAT3-201ENST00000261407 TRBV6-4A0A1B0GX49 114 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 SOSTDC1Q6X4U4 206 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 CLEC2BQ92478 149 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 TIMM17BO60830 172 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 DEFB130BP0DP73 79 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 DEFB130AP0DP74 79 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 ATXN8Q156A1 80 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 LINC00308Q8TCZ7 52 aa13.55□□□□□ -0.24
LPCAT3-201ENST00000261407 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
LPCAT3-201ENST00000261407 RPL13AP40429 203 aaKnown RBP13.54□□□□□ -0.24
LPCAT3-201ENST00000261407 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
LPCAT3-201ENST00000261407 TRRAPQ9Y4A5 3859 aa13.53□□□□□ -0.24
LPCAT3-201ENST00000261407 CIRBPQ14011 172 aaKnown RBP13.52□□□□□ -0.25
LPCAT3-201ENST00000261407 CRLF1O75462 422 aa13.51□□□□□ -0.25
LPCAT3-201ENST00000261407 PF4P02776 101 aa13.51□□□□□ -0.25
LPCAT3-201ENST00000261407 IFITM1P13164 125 aa13.51□□□□□ -0.25
LPCAT3-201ENST00000261407 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
LPCAT3-201ENST00000261407 NTN5Q8WTR8 489 aaPredicted RBP13.51□□□□□ -0.25
LPCAT3-201ENST00000261407 TRBV6-8A0A0A6YYG3 113 aa13.49□□□□□ -0.25
LPCAT3-201ENST00000261407 TEX49A0A1B0GTD5 131 aa13.49□□□□□ -0.25
LPCAT3-201ENST00000261407 MT-ATP8P03928 68 aa13.49□□□□□ -0.25
LPCAT3-201ENST00000261407 XGP55808 180 aa13.49□□□□□ -0.25
LPCAT3-201ENST00000261407 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
LPCAT3-201ENST00000261407 RNF183Q96D59 192 aa13.49□□□□□ -0.25
LPCAT3-201ENST00000261407 LY6G6DO95868 133 aa13.48□□□□□ -0.25
LPCAT3-201ENST00000261407 CHCHD5Q9BSY4 110 aa13.48□□□□□ -0.25
LPCAT3-201ENST00000261407 H7C423 109 aa13.48□□□□□ -0.25
LPCAT3-201ENST00000261407 TRBV10-2A0A0K0K1G8 114 aa13.47□□□□□ -0.25
LPCAT3-201ENST00000261407 TOMM7Q9P0U1 55 aa13.47□□□□□ -0.25
LPCAT3-201ENST00000261407 A0A096LPF7 62 aa13.45□□□□□ -0.26
LPCAT3-201ENST00000261407 COX6CP09669 75 aa13.45□□□□□ -0.26
LPCAT3-201ENST00000261407 NSD1Q96L73 2696 aaPredicted RBP13.44□□□□□ -0.26
LPCAT3-201ENST00000261407 M0QXV9 152 aa13.44□□□□□ -0.26
LPCAT3-201ENST00000261407 X6R8D5 127 aa13.44□□□□□ -0.26
LPCAT3-201ENST00000261407 DEFB4AO15263 64 aa13.43□□□□□ -0.26
LPCAT3-201ENST00000261407 C2orf82Q6UX34 121 aa13.43□□□□□ -0.26
LPCAT3-201ENST00000261407 LST1O00453 97 aa13.43□□□□□ -0.26
LPCAT3-201ENST00000261407 CIDEAO60543 219 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 GYPEP15421 78 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 C5orf38Q86SI9 138 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 IGHV3OR16-9A0A0B4J2B5 98 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 INAFM1C9JVW0 142 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 SCGB1A1P11684 91 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 COX7B2Q8TF08 81 aa13.42□□□□□ -0.26
LPCAT3-201ENST00000261407 ATRQ13535 2644 aa13.4□□□□□ -0.26
LPCAT3-201ENST00000261407 KIR2DL5BQ8NHK3 375 aa13.4□□□□□ -0.26
LPCAT3-201ENST00000261407 HERV-K104P63124 156 aa13.39□□□□□ -0.27
LPCAT3-201ENST00000261407 CLPSL2Q6UWE3 100 aa13.39□□□□□ -0.27
LPCAT3-201ENST00000261407 MIR7-3HGQ8N6C7 128 aa13.39□□□□□ -0.27
LPCAT3-201ENST00000261407 LINC00612Q8N6U2 182 aa13.39□□□□□ -0.27
LPCAT3-201ENST00000261407 TMEM262E9PQX1 116 aa13.38□□□□□ -0.27
LPCAT3-201ENST00000261407 LINC01600Q96MT4 127 aa13.38□□□□□ -0.27
LPCAT3-201ENST00000261407 FAM222AQ5U5X8 452 aa13.37□□□□□ -0.27
LPCAT3-201ENST00000261407 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
LPCAT3-201ENST00000261407 C11orf68Q9H3H3 251 aaKnown RBP13.37□□□□□ -0.27
LPCAT3-201ENST00000261407 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
LPCAT3-201ENST00000261407 DEFB135Q30KP9 77 aa13.37□□□□□ -0.27
LPCAT3-201ENST00000261407 UBE2WQ96B02 151 aa13.37□□□□□ -0.27
LPCAT3-201ENST00000261407 LINC00959A0A1B0GUT2 108 aa13.36□□□□□ -0.27
LPCAT3-201ENST00000261407 XCL1P47992 114 aa13.35□□□□□ -0.27
LPCAT3-201ENST00000261407 A0A087WZ39 114 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 LINC00158P58513 81 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 Q8N3U1 123 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 COX7A2LO14548 114 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 PFN2P35080 140 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 LINC00337Q8N6G1 96 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 FAM218AQ96MZ4 157 aa13.34□□□□□ -0.27
LPCAT3-201ENST00000261407 H3BT86 120 aa13.33□□□□□ -0.28
LPCAT3-201ENST00000261407 TEP1Q99973 2627 aaKnown RBP13.32□□□□□ -0.28
LPCAT3-201ENST00000261407 COPS9Q8WXC6 57 aa13.32□□□□□ -0.28
LPCAT3-201ENST00000261407 PRO0255Q9UI72 69 aa13.32□□□□□ -0.28
LPCAT3-201ENST00000261407 SND1-IT1Q9HBX3 110 aa13.32□□□□□ -0.28
LPCAT3-201ENST00000261407 TRAV8-4A0A0B4J246 113 aa13.3□□□□□ -0.28
LPCAT3-201ENST00000261407 PAX4O43316 350 aa13.29□□□□□ -0.28
LPCAT3-201ENST00000261407 CCL18P55774 89 aa13.29□□□□□ -0.28
LPCAT3-201ENST00000261407 C9orf66Q5T8R8 295 aa13.29□□□□□ -0.28
LPCAT3-201ENST00000261407 CKS1BP61024 79 aa13.28□□□□□ -0.28
LPCAT3-201ENST00000261407 IGHV4-28A0A0C4DH34 117 aa13.28□□□□□ -0.28
LPCAT3-201ENST00000261407 SMIM9A6NGZ8 99 aa13.28□□□□□ -0.28
LPCAT3-201ENST00000261407 CELA1Q9UNI1 258 aa13.28□□□□□ -0.28
LPCAT3-201ENST00000261407 C6orf226Q5I0X4 101 aa13.27□□□□□ -0.28
LPCAT3-201ENST00000261407 A0A1B0GUV1 79 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms