RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SCN7AQ01118 1682 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 NHSL1Q5SYE7 1610 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 UBR3Q6ZT12 1888 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.2□□□□□ -2.06
CCDC54-201ENST00000261058 LAMA4Q16363 1823 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 TRAV12-3A0A0B4J271 114 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 TRBV7-4A0A0J9YYF1 115 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 J3QRE1 110 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 DNAL4O96015 105 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 PLNP26678 52 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 FXYD6P3P58550 94 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 LYPD6Q86Y78 171 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 TMEM254Q8TBM7 123 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 RICTORQ6R327 1708 aa2.19□□□□□ -2.06
CCDC54-201ENST00000261058 C10orf142B7Z368 130 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 DEFA4P12838 97 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 ELOF1P60002 83 aaKnown RBP2.18□□□□□ -2.06
CCDC54-201ENST00000261058 FAM74A4Q5TZK3 123 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 SNURFQ9Y675 71 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 ARHGAP32A7KAX9 2087 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 COL11A1P12107 1806 aaPredicted RBP2.18□□□□□ -2.06
CCDC54-201ENST00000261058 DUOX1Q9NRD9 1551 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 DLEC1Q9Y238 1755 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 DDX60Q8IY21 1712 aaKnown RBP2.18□□□□□ -2.06
CCDC54-201ENST00000261058 PARP4Q9UKK3 1724 aaKnown RBP2.18□□□□□ -2.06
CCDC54-201ENST00000261058 TOGARAM1Q9Y4F4 1720 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 SIP14410 1827 aa2.18□□□□□ -2.06
CCDC54-201ENST00000261058 IGKV1D-42A0A075B6H8 117 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 A0A087WVE0 104 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 TRAV10A0A0B4J240 114 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 IGKV3D-7A0A0C4DH55 119 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 HIGD1CA8MV81 97 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 HMGN4O00479 90 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 TFF1P04155 84 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 TMEM263Q8WUH6 116 aaKnown RBP2.17□□□□□ -2.06
CCDC54-201ENST00000261058 C20orf166-AS1Q96NR2 134 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 NDUFA4L2Q9NRX3 87 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 PSORS1C2Q9UIG4 136 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 MINOS1-NBL1R4GNA1 71 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 MYO7AQ13402 2215 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 MYO16Q9Y6X6 1858 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 MYOFQ9NZM1 2061 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 HEATR1Q9H583 2144 aaKnown RBP2.17□□□□□ -2.06
CCDC54-201ENST00000261058 MED13Q9UHV7 2174 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 NCOA6Q14686 2063 aaPredicted RBP2.17□□□□□ -2.06
CCDC54-201ENST00000261058 EML5Q05BV3 1969 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 PCDH15Q96QU1 1955 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
CCDC54-201ENST00000261058 PPP1R17O96001 155 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 KRTAP25-1Q3LHN0 102 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.17□□□□□ -2.06
CCDC54-201ENST00000261058 HIGD2AQ9BW72 106 aa2.17□□□□□ -2.06
CCDC54-201ENST00000261058 HIVEP2P31629 2446 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 DEPDC5O75140 1603 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 LRP6O75581 1613 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 SDK2Q58EX2 2172 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 TRAV12-1A0A0B4J245 112 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 TRBV10-1A0A0K0K1A3 114 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 LINC01546A6NGU7 62 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 K7EMI3 77 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 IGHV3-30P01768 117 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 IGHV3-30-5P0DP03 117 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 Q86TA4 180 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 PRR15LQ9BU68 103 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 ORMDL1Q9P0S3 153 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 LENEPQ9Y5L5 61 aa2.16□□□□□ -2.06
CCDC54-201ENST00000261058 BAZ2BQ9UIF8 2168 aaKnown RBP2.16□□□□□ -2.06
CCDC54-201ENST00000261058 MPDZO75970 2070 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 A0A0J9YX75 114 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 TRBV6-5A0A0K0K1A5 114 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 A0A1B0GUT8 65 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 SPINK4O60575 86 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 NDUFB1O75438 58 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 AMELXQ99217 191 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 Q9BRP9 147 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 CACNA1DQ01668 2161 aa2.15□□□□□ -2.07
CCDC54-201ENST00000261058 TIAM2Q8IVF5 1701 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 A0A0J9YY99 117 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 PIN1P1O15428 100 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 Q8TAT8 98 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 OBSCN-AS1Q96MR7 158 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 UBL5Q9BZL1 73 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 LINC00846Q9NV44 126 aa2.14□□□□□ -2.07
CCDC54-201ENST00000261058 DIDO1Q9BTC0 2240 aaKnown RBP2.14□□□□□ -2.07
CCDC54-201ENST00000261058 LMO7Q8WWI1 1683 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 IGKV3D-11A0A0A0MRZ8 115 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 ODF3BA8MYP8 253 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 P0C880 135 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 SPAG11BQ08648 103 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 NREPQ16612 68 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 C1orf137Q5JT78 98 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 CSAG1Q6PB30 78 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 SPAG11AQ6PDA7 123 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 ZNF833PQ6ZTB9 187 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 LHFPL6Q9Y693 200 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 FREM3P0C091 2139 aa2.13□□□□□ -2.07
CCDC54-201ENST00000261058 A0A0G2JMZ2 1700 aa2.12□□□□□ -2.07
CCDC54-201ENST00000261058 LRRC37A2A6NM11 1700 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms