RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 GEMIN7Q9H840 131 aaKnown RBP12.35□□□□□ -0.43
SSB-201ENST00000260956 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
SSB-201ENST00000260956 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
SSB-201ENST00000260956 F5H768 121 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 HERVK_113P63121 156 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 DGAT2L7PQ6IED9 249 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 TMEM101Q96IK0 257 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 OCIAD2Q56VL3 154 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 SPANXDQ9BXN6 97 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
SSB-201ENST00000260956 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
SSB-201ENST00000260956 B9D2Q9BPU9 175 aa12.33□□□□□ -0.44
SSB-201ENST00000260956 A4D1N5 150 aa12.32□□□□□ -0.44
SSB-201ENST00000260956 NDUFA1O15239 70 aa12.32□□□□□ -0.44
SSB-201ENST00000260956 SMAGPQ0VAQ4 97 aa12.32□□□□□ -0.44
SSB-201ENST00000260956 ADAMTSL4-AS1Q5T5F5 129 aa12.32□□□□□ -0.44
SSB-201ENST00000260956 PRO0461Q9UI25 63 aa12.32□□□□□ -0.44
SSB-201ENST00000260956 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
SSB-201ENST00000260956 TIMM17BO60830 172 aa12.31□□□□□ -0.44
SSB-201ENST00000260956 MUSTN1Q8IVN3 82 aa12.31□□□□□ -0.44
SSB-201ENST00000260956 A0A0B4J2C4 111 aa12.31□□□□□ -0.44
SSB-201ENST00000260956 APOMO95445 188 aa12.3□□□□□ -0.44
SSB-201ENST00000260956 LYRM9A8MSI8 78 aa12.29□□□□□ -0.44
SSB-201ENST00000260956 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
SSB-201ENST00000260956 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
SSB-201ENST00000260956 MIAQ16674 131 aa12.28□□□□□ -0.44
SSB-201ENST00000260956 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
SSB-201ENST00000260956 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
SSB-201ENST00000260956 DEFB135Q30KP9 77 aa12.28□□□□□ -0.44
SSB-201ENST00000260956 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
SSB-201ENST00000260956 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.45
SSB-201ENST00000260956 APOC4P55056 127 aa12.27□□□□□ -0.45
SSB-201ENST00000260956 RPL24P83731 157 aaKnown RBP12.27□□□□□ -0.45
SSB-201ENST00000260956 FAM222AQ5U5X8 452 aa12.27□□□□□ -0.45
SSB-201ENST00000260956 Q8NAQ8 132 aa12.27□□□□□ -0.45
SSB-201ENST00000260956 RNF183Q96D59 192 aa12.27□□□□□ -0.45
SSB-201ENST00000260956 ZNF625Q96I27 306 aaPredicted RBP12.27□□□□□ -0.45
SSB-201ENST00000260956 H3BMG7 143 aa12.26□□□□□ -0.45
SSB-201ENST00000260956 UBE2L6O14933 153 aa12.26□□□□□ -0.45
SSB-201ENST00000260956 GAGE6Q13070 117 aa12.26□□□□□ -0.45
SSB-201ENST00000260956 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
SSB-201ENST00000260956 GYPEP15421 78 aa12.25□□□□□ -0.45
SSB-201ENST00000260956 PRO0255Q9UI72 69 aa12.24□□□□□ -0.45
SSB-201ENST00000260956 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.23□□□□□ -0.45
SSB-201ENST00000260956 F8W1H4 67 aa12.23□□□□□ -0.45
SSB-201ENST00000260956 WFDC2Q14508 124 aa12.23□□□□□ -0.45
SSB-201ENST00000260956 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
SSB-201ENST00000260956 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
SSB-201ENST00000260956 RETNQ9HD89 108 aa12.23□□□□□ -0.45
SSB-201ENST00000260956 Q9H8V8 135 aa12.22□□□□□ -0.45
SSB-201ENST00000260956 CELA1Q9UNI1 258 aa12.22□□□□□ -0.45
SSB-201ENST00000260956 IGHV3OR16-9A0A0B4J2B5 98 aa12.21□□□□□ -0.45
SSB-201ENST00000260956 IFITM1P13164 125 aa12.21□□□□□ -0.45
SSB-201ENST00000260956 SMCPP49901 116 aaPredicted RBP12.21□□□□□ -0.45
SSB-201ENST00000260956 K7ERU9 68 aa12.2□□□□□ -0.46
SSB-201ENST00000260956 MIFP14174 115 aa12.2□□□□□ -0.46
SSB-201ENST00000260956 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
SSB-201ENST00000260956 TCL1BO95988 128 aa12.2□□□□□ -0.46
SSB-201ENST00000260956 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
SSB-201ENST00000260956 DEFB4AO15263 64 aa12.19□□□□□ -0.46
SSB-201ENST00000260956 SFTA2Q6UW10 78 aa12.19□□□□□ -0.46
SSB-201ENST00000260956 PPDPFQ9H3Y8 114 aa12.19□□□□□ -0.46
SSB-201ENST00000260956 TEX48A0A1B0GUV7 120 aa12.18□□□□□ -0.46
SSB-201ENST00000260956 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
SSB-201ENST00000260956 LYRM7Q5U5X0 104 aa12.18□□□□□ -0.46
SSB-201ENST00000260956 LOC107984156A0A0G2JMH3 177 aa12.17□□□□□ -0.46
SSB-201ENST00000260956 SOSTDC1Q6X4U4 206 aa12.17□□□□□ -0.46
SSB-201ENST00000260956 ARL17AQ8IVW1 177 aa12.17□□□□□ -0.46
SSB-201ENST00000260956 PAX4O43316 350 aa12.17□□□□□ -0.46
SSB-201ENST00000260956 MTURNQ8N3F0 131 aa12.17□□□□□ -0.46
SSB-201ENST00000260956 ERG28Q9UKR5 140 aa12.17□□□□□ -0.46
SSB-201ENST00000260956 TRBV20-1A0A075B6N2 111 aa12.16□□□□□ -0.46
SSB-201ENST00000260956 A0A087WZ39 114 aa12.16□□□□□ -0.46
SSB-201ENST00000260956 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
SSB-201ENST00000260956 HERV-K104P63124 156 aa12.16□□□□□ -0.46
SSB-201ENST00000260956 DAND5Q8N907 189 aa12.16□□□□□ -0.46
SSB-201ENST00000260956 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
SSB-201ENST00000260956 TRAV26-1A0A087WT03 109 aa12.15□□□□□ -0.46
SSB-201ENST00000260956 PRSS2P07478 247 aa12.15□□□□□ -0.46
SSB-201ENST00000260956 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
SSB-201ENST00000260956 PSMB2P49721 201 aa12.14□□□□□ -0.47
SSB-201ENST00000260956 DAD1P61803 113 aa12.14□□□□□ -0.47
SSB-201ENST00000260956 DNAH7Q8WXX0 4024 aa12.14□□□□□ -0.47
SSB-201ENST00000260956 COX7B2Q8TF08 81 aa12.14□□□□□ -0.47
SSB-201ENST00000260956 NPC2P61916 151 aa12.13□□□□□ -0.47
SSB-201ENST00000260956 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
SSB-201ENST00000260956 CSMD3Q7Z407 3707 aa12.12□□□□□ -0.47
SSB-201ENST00000260956 TRIAP1O43715 76 aa12.12□□□□□ -0.47
SSB-201ENST00000260956 ATP5G1P05496 136 aa12.12□□□□□ -0.47
SSB-201ENST00000260956 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
SSB-201ENST00000260956 SH2D6Q7Z4S9 175 aa12.12□□□□□ -0.47
SSB-201ENST00000260956 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
SSB-201ENST00000260956 CIRBPQ14011 172 aaKnown RBP12.11□□□□□ -0.47
SSB-201ENST00000260956 ETDBQ3ZM63 59 aa12.11□□□□□ -0.47
SSB-201ENST00000260956 LINC01600Q96MT4 127 aa12.11□□□□□ -0.47
SSB-201ENST00000260956 A0A096LPF7 62 aa12.1□□□□□ -0.47
SSB-201ENST00000260956 IGKV3OR2-268A0A0C4DH90 116 aa12.1□□□□□ -0.47
SSB-201ENST00000260956 SPART-AS1P0CW21 52 aa12.1□□□□□ -0.47
SSB-201ENST00000260956 M0QXV9 152 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms