RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 C16orf95Q9H693 158 aa10.13□□□□□ -0.79
LIMD2-201ENST00000259006 TRAV23DV6A0A075B6W5 121 aa10.13□□□□□ -0.79
LIMD2-201ENST00000259006 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
LIMD2-201ENST00000259006 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
LIMD2-201ENST00000259006 FBN2P35556 2912 aa10.13□□□□□ -0.79
LIMD2-201ENST00000259006 A0A0J9YX75 114 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 IGHG2P01859 326 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 TRBV6-5A0A0K0K1A5 114 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
LIMD2-201ENST00000259006 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
LIMD2-201ENST00000259006 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 LITAFQ99732 161 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 Q9HAA7 133 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 HIST2H2BCQ6DN03 193 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 DGAT2L7PQ6IED9 249 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 CDKN2A-AS1Q9UH64 79 aa10.12□□□□□ -0.79
LIMD2-201ENST00000259006 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
LIMD2-201ENST00000259006 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
LIMD2-201ENST00000259006 NDUFC2O95298 119 aa10.11□□□□□ -0.79
LIMD2-201ENST00000259006 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
LIMD2-201ENST00000259006 TMEM61Q8N0U2 210 aa10.11□□□□□ -0.79
LIMD2-201ENST00000259006 HOXD3P31249 432 aaPredicted RBP10.11□□□□□ -0.79
LIMD2-201ENST00000259006 IGHV1-58A0A0C4DH39 117 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 FAM104AQ969W3 186 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 IGHV4-59P01825 116 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 KLK9Q2XQG4 91 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 CCL19Q99731 98 aa10.1□□□□□ -0.79
LIMD2-201ENST00000259006 DEFB131AP59861 70 aa10.09□□□□□ -0.79
LIMD2-201ENST00000259006 MPLKIPQ8TAP9 179 aa10.09□□□□□ -0.79
LIMD2-201ENST00000259006 LINC00846Q9NV44 126 aa10.09□□□□□ -0.79
LIMD2-201ENST00000259006 UBR5O95071 2799 aaPredicted RBP10.09□□□□□ -0.79
LIMD2-201ENST00000259006 INAFM2P0DMQ5 153 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 VSIG2Q96IQ7 327 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 MXRA5Q9NR99 2828 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
LIMD2-201ENST00000259006 SMIM26A0A096LP01 95 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 ITPR2Q14571 2701 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 PSMB8P28062 276 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 XCL1P47992 114 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 RBM3P98179 157 aaKnown RBP10.08□□□□□ -0.8
LIMD2-201ENST00000259006 CFHR3Q02985 330 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 MIAQ16674 131 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 KHDC1LQ5JSQ8 128 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.08□□□□□ -0.8
LIMD2-201ENST00000259006 XCL2Q9UBD3 114 aa10.08□□□□□ -0.8
LIMD2-201ENST00000259006 Q9H8V8 135 aa10.07□□□□□ -0.8
LIMD2-201ENST00000259006 MTORP42345 2549 aa10.07□□□□□ -0.8
LIMD2-201ENST00000259006 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
LIMD2-201ENST00000259006 A6NDX4 124 aa10.07□□□□□ -0.8
LIMD2-201ENST00000259006 COX6A2Q02221 97 aa10.07□□□□□ -0.8
LIMD2-201ENST00000259006 Q8N2B8 174 aa10.06□□□□□ -0.8
LIMD2-201ENST00000259006 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
LIMD2-201ENST00000259006 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
LIMD2-201ENST00000259006 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
LIMD2-201ENST00000259006 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
LIMD2-201ENST00000259006 COX7A2LO14548 114 aa10.06□□□□□ -0.8
LIMD2-201ENST00000259006 SNURFQ9Y675 71 aa10.06□□□□□ -0.8
LIMD2-201ENST00000259006 FLNBO75369 2602 aaKnown RBP10.05□□□□□ -0.8
LIMD2-201ENST00000259006 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
LIMD2-201ENST00000259006 K7EQG2 157 aa10.05□□□□□ -0.8
LIMD2-201ENST00000259006 IGLV1-40P01703 118 aa10.05□□□□□ -0.8
LIMD2-201ENST00000259006 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
LIMD2-201ENST00000259006 Q6JHZ5 121 aa10.05□□□□□ -0.8
LIMD2-201ENST00000259006 GCN1Q92616 2671 aaKnown RBP10.05□□□□□ -0.8
LIMD2-201ENST00000259006 NBPF19A0A087WUL8 3843 aa10.05□□□□□ -0.8
LIMD2-201ENST00000259006 TIMM17BO60830 172 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 TEX15Q9BXT5 2789 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 APCP25054 2843 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 RPL28P46779 137 aaKnown RBP10.04□□□□□ -0.8
LIMD2-201ENST00000259006 SOSTDC1Q6X4U4 206 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 NF1P21359 2839 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
LIMD2-201ENST00000259006 SLURP1P55000 103 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 KRTAP10-9P60411 292 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 CHCHD7Q9BUK0 85 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 H7BZZ5 65 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 DEFB112Q30KQ8 113 aa10.03□□□□□ -0.8
LIMD2-201ENST00000259006 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
LIMD2-201ENST00000259006 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
LIMD2-201ENST00000259006 C11orf44Q8N8P7 122 aa10.01□□□□□ -0.81
LIMD2-201ENST00000259006 K7EMT4 169 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 PMAIP1Q13794 54 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 EPM2AB3EWF7 344 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 C6orf226Q5I0X4 101 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 RMI2Q96E14 147 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 MSMBP08118 114 aa10□□□□□ -0.81
LIMD2-201ENST00000259006 FLNAP21333 2647 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms