RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 C1orf158Q8N1D5 194 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 C1orf195Q5TG92 126 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
RC3H1-201ENST00000258349 C7orf33Q8WU49 177 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 FLG2Q5D862 2391 aaPredicted RBP3.56□□□□□ -1.84
RC3H1-201ENST00000258349 CRIP3Q6Q6R5 217 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 KLLNB2CW77 178 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 Q6ZPA2 131 aa3.56□□□□□ -1.84
RC3H1-201ENST00000258349 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 IGKV2-24A0A0C4DH68 120 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 SMIM11BQ8TCY0 68 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 C9orf85Q96MD7 179 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 HIGD2AQ9BW72 106 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 UBE2D4Q9Y2X8 147 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 LINC00694P0DN24 101 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 FAM19A5Q7Z5A7 132 aaPredicted RBP3.55□□□□□ -1.84
RC3H1-201ENST00000258349 Q8IZM0 81 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 IGHV4-31P0DP07 118 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 WFDC11Q8NEX6 87 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 C10orf25Q5T742 122 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 MRGPRG-AS1Q2M3A8 158 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 DEFB131BA0A096LNP1 70 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
RC3H1-201ENST00000258349 ZNF73O43830 326 aaPredicted RBP3.55□□□□□ -1.84
RC3H1-201ENST00000258349 LINC01548A6NM66 108 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 LELP1Q5T871 98 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 RNASE3P12724 160 aaKnown RBP3.54□□□□□ -1.84
RC3H1-201ENST00000258349 LMO4P61968 165 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 C6orf99Q4VX62 202 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 ZNF462Q96JM2 2506 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 Q8N814 137 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 XGP55808 180 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 MSMPQ1L6U9 139 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 DCANP1Q8TF63 244 aa3.54□□□□□ -1.84
RC3H1-201ENST00000258349 UBE2D2P62837 147 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 Q8N9L7 120 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 Q8NA96 180 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 FAM30AQ9NZY2 134 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 NRGNQ92686 78 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 A0A1W2PNU3 283 aaPredicted RBP3.53□□□□□ -1.84
RC3H1-201ENST00000258349 F8WDY8 70 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 C1orf229Q6ZS94 237 aaPredicted RBP3.53□□□□□ -1.84
RC3H1-201ENST00000258349 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 PSMG3-AS1Q96PY0 264 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 PRORYQ9H606 182 aa3.53□□□□□ -1.84
RC3H1-201ENST00000258349 IGKV2-28A0A075B6P5 120 aa3.53□□□□□ -1.85
RC3H1-201ENST00000258349 IGKV2D-28P01615 120 aa3.53□□□□□ -1.85
RC3H1-201ENST00000258349 RPL28P46779 137 aaKnown RBP3.53□□□□□ -1.85
RC3H1-201ENST00000258349 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 UBE2D3P61077 147 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 C22orf34Q6ZV56 151 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 PRYO14603 147 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 Q6ZQY7 126 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 Q8N6K4 173 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
RC3H1-201ENST00000258349 C11orf71Q6IPW1 123 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
RC3H1-201ENST00000258349 XAGE1AQ9HD64 81 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 PRR9Q5T870 116 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 WFDC10AQ9H1F0 79 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 LINC00959A0A1B0GUT2 108 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 Q6ZS46 218 aa3.52□□□□□ -1.85
RC3H1-201ENST00000258349 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
RC3H1-201ENST00000258349 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 PROK1P58294 105 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 REG3GQ6UW15 175 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 NTM-AS1Q6ZSK4 140 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 CDC42SE2Q9NRR3 84 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 IGLV1-40P01703 118 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 CXCL6P80162 114 aa3.51□□□□□ -1.85
RC3H1-201ENST00000258349 CSDC2Q9Y534 153 aaKnown RBP3.5□□□□□ -1.85
RC3H1-201ENST00000258349 LRCOL1A6NCL2 159 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 Q8N976 141 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 PLAC8L1A1L4L8 177 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 POLQO75417 2590 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 EP400Q96L91 3159 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 LINC01546A6NGU7 62 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 ESRGQ1W209 222 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 CLUHP3Q96NS8 147 aa3.5□□□□□ -1.85
RC3H1-201ENST00000258349 BBC3Q96PG8 261 aaPredicted RBP3.5□□□□□ -1.85
RC3H1-201ENST00000258349 A8MZ25 164 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 HRCT1Q6UXD1 115 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 LINC01561Q8N1V8 128 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 RPL37AP8A6NKH3 93 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 A0A087WYN8 130 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 POM121L12Q8N7R1 296 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 CENPFP49454 3210 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 C1orf137Q5JT78 98 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 COX8CQ7Z4L0 72 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 PLA2G5P39877 138 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 AMELXQ99217 191 aa3.49□□□□□ -1.85
RC3H1-201ENST00000258349 LINC00310P59036 64 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms