RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DNAJC9-AS1A6NH13 148 aa9.69□□□□□ -0.86
VHL-201ENST00000256474 ESM1Q9NQ30 184 aa9.69□□□□□ -0.86
VHL-201ENST00000256474 Q8N2B8 174 aa9.69□□□□□ -0.86
VHL-201ENST00000256474 K7EQD1 137 aa9.68□□□□□ -0.86
VHL-201ENST00000256474 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
VHL-201ENST00000256474 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
VHL-201ENST00000256474 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
VHL-201ENST00000256474 HERVK_113P63121 156 aa9.67□□□□□ -0.86
VHL-201ENST00000256474 VWFP04275 2813 aa9.66□□□□□ -0.86
VHL-201ENST00000256474 DEFB4AO15263 64 aa9.66□□□□□ -0.86
VHL-201ENST00000256474 TMEM243Q9BU79 118 aa9.66□□□□□ -0.86
VHL-201ENST00000256474 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
VHL-201ENST00000256474 RNASE1P07998 156 aaKnown RBP9.65□□□□□ -0.86
VHL-201ENST00000256474 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.86
VHL-201ENST00000256474 SPANXDQ9BXN6 97 aa9.65□□□□□ -0.86
VHL-201ENST00000256474 SPANXCQ9NY87 97 aa9.65□□□□□ -0.86
VHL-201ENST00000256474 SBSPONQ8IVN8 264 aa9.64□□□□□ -0.87
VHL-201ENST00000256474 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
VHL-201ENST00000256474 NDUFA1O15239 70 aa9.64□□□□□ -0.87
VHL-201ENST00000256474 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
VHL-201ENST00000256474 DNAJC30Q96LL9 226 aa9.64□□□□□ -0.87
VHL-201ENST00000256474 PAX4O43316 350 aa9.63□□□□□ -0.87
VHL-201ENST00000256474 ATP5G1P05496 136 aa9.63□□□□□ -0.87
VHL-201ENST00000256474 XCL1P47992 114 aa9.63□□□□□ -0.87
VHL-201ENST00000256474 HELZ2Q9BYK8 2649 aaKnown RBP9.63□□□□□ -0.87
VHL-201ENST00000256474 LST1O00453 97 aa9.62□□□□□ -0.87
VHL-201ENST00000256474 CR1P17927 2039 aa9.62□□□□□ -0.87
VHL-201ENST00000256474 IGLV4-60A0A075B6I1 120 aa9.62□□□□□ -0.87
VHL-201ENST00000256474 FLNBO75369 2602 aaKnown RBP9.62□□□□□ -0.87
VHL-201ENST00000256474 ZNF843Q8N446 348 aa9.61□□□□□ -0.87
VHL-201ENST00000256474 GAGE2AQ6NT46 116 aa9.61□□□□□ -0.87
VHL-201ENST00000256474 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
VHL-201ENST00000256474 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
VHL-201ENST00000256474 CRPP02741 224 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 IFITM1P13164 125 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 TIRAPP58753 221 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 BEAN1Q3B7T3 259 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 HTN3P15516 51 aa9.6□□□□□ -0.87
VHL-201ENST00000256474 NDUFV3P56181 108 aaKnown RBP9.59□□□□□ -0.87
VHL-201ENST00000256474 DAZ2Q13117 558 aaKnown RBP9.59□□□□□ -0.87
VHL-201ENST00000256474 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
VHL-201ENST00000256474 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
VHL-201ENST00000256474 DNAL4O96015 105 aa9.59□□□□□ -0.87
VHL-201ENST00000256474 FSHBP01225 129 aa9.59□□□□□ -0.87
VHL-201ENST00000256474 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
VHL-201ENST00000256474 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
VHL-201ENST00000256474 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
VHL-201ENST00000256474 SMR3AQ99954 134 aa9.59□□□□□ -0.87
VHL-201ENST00000256474 SLPIP03973 132 aa9.58□□□□□ -0.88
VHL-201ENST00000256474 TENM4Q6N022 2769 aa9.58□□□□□ -0.88
VHL-201ENST00000256474 PF4P02776 101 aa9.58□□□□□ -0.88
VHL-201ENST00000256474 LINC01006Q8NI28 216 aa9.58□□□□□ -0.88
VHL-201ENST00000256474 ATRQ13535 2644 aa9.58□□□□□ -0.88
VHL-201ENST00000256474 H3BT86 120 aa9.57□□□□□ -0.88
VHL-201ENST00000256474 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
VHL-201ENST00000256474 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
VHL-201ENST00000256474 FAM218AQ96MZ4 157 aa9.57□□□□□ -0.88
VHL-201ENST00000256474 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
VHL-201ENST00000256474 COX7A2LO14548 114 aa9.56□□□□□ -0.88
VHL-201ENST00000256474 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
VHL-201ENST00000256474 GYPEP15421 78 aa9.55□□□□□ -0.88
VHL-201ENST00000256474 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
VHL-201ENST00000256474 PRR3P79522 188 aaKnown RBP9.55□□□□□ -0.88
VHL-201ENST00000256474 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
VHL-201ENST00000256474 EDA2RQ9HAV5 297 aa9.54□□□□□ -0.88
VHL-201ENST00000256474 FAM236AA0A1B0GUQ0 79 aa9.53□□□□□ -0.88
VHL-201ENST00000256474 FAM236BA0A1B0GV22 79 aa9.53□□□□□ -0.88
VHL-201ENST00000256474 LINC00337Q8N6G1 96 aa9.53□□□□□ -0.88
VHL-201ENST00000256474 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
VHL-201ENST00000256474 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
VHL-201ENST00000256474 A8MTW9 85 aa9.53□□□□□ -0.88
VHL-201ENST00000256474 NHLRC4P0CG21 123 aaPredicted RBP9.53□□□□□ -0.88
VHL-201ENST00000256474 LINC00526Q96FQ7 95 aa9.53□□□□□ -0.88
VHL-201ENST00000256474 LECT2O14960 151 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 TIMM17BO60830 172 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 F5H768 121 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 TRRAPQ9Y4A5 3859 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 Q8N3U1 123 aa9.52□□□□□ -0.89
VHL-201ENST00000256474 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
VHL-201ENST00000256474 A0A087WYN8 130 aa9.51□□□□□ -0.89
VHL-201ENST00000256474 PDZD2O15018 2839 aa9.51□□□□□ -0.89
VHL-201ENST00000256474 SMIM11BQ8TCY0 68 aa9.51□□□□□ -0.89
VHL-201ENST00000256474 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
VHL-201ENST00000256474 CCL18P55774 89 aa9.5□□□□□ -0.89
VHL-201ENST00000256474 IGKV3D-7A0A0C4DH55 119 aa9.49□□□□□ -0.89
VHL-201ENST00000256474 DEFB135Q30KP9 77 aa9.49□□□□□ -0.89
VHL-201ENST00000256474 UNC79Q9P2D8 2635 aa9.49□□□□□ -0.89
VHL-201ENST00000256474 KRTAP1-3Q8IUG1 177 aa9.49□□□□□ -0.89
VHL-201ENST00000256474 F8P00451 2351 aa9.49□□□□□ -0.89
VHL-201ENST00000256474 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
VHL-201ENST00000256474 FHL2Q14192 279 aa9.48□□□□□ -0.89
VHL-201ENST00000256474 NCR3O14931 201 aa9.48□□□□□ -0.89
VHL-201ENST00000256474 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
VHL-201ENST00000256474 C9orf153Q5TBE3 101 aa9.48□□□□□ -0.89
VHL-201ENST00000256474 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms