RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SMIM1B2RUZ4 78 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 LINC00694P0DN24 101 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 COL6A6A6NMZ7 2263 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 RTTNQ86VV8 2226 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 A0A1W2PPR1 153 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 Q8N814 137 aa6.23□□□□□ -1.41
PTCD3-201ENST00000254630 NDUFC1O43677 76 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 NACAE9PAV3 2078 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 DOCK10Q96BY6 2186 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 ESRGQ1W209 222 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 Q6ZSN1 163 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 LINC01556Q5JQF7 62 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 C1orf137Q5JT78 98 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 V9GYY9 64 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 CEP290O15078 2479 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 CACNA1BQ00975 2339 aa6.22□□□□□ -1.41
PTCD3-201ENST00000254630 A0A087WYN8 130 aa6.21□□□□□ -1.41
PTCD3-201ENST00000254630 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.41
PTCD3-201ENST00000254630 Q6JHZ5 121 aa6.21□□□□□ -1.41
PTCD3-201ENST00000254630 HCFC1P51610 2035 aa6.21□□□□□ -1.41
PTCD3-201ENST00000254630 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
PTCD3-201ENST00000254630 PRYO14603 147 aa6.21□□□□□ -1.42
PTCD3-201ENST00000254630 BEAN1Q3B7T3 259 aa6.21□□□□□ -1.42
PTCD3-201ENST00000254630 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
PTCD3-201ENST00000254630 EML5Q05BV3 1969 aa6.2□□□□□ -1.42
PTCD3-201ENST00000254630 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
PTCD3-201ENST00000254630 NHLRC4P0CG21 123 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-201ENST00000254630 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
PTCD3-201ENST00000254630 AMELXQ99217 191 aa6.19□□□□□ -1.42
PTCD3-201ENST00000254630 IMUPQ9GZP8 106 aa6.19□□□□□ -1.42
PTCD3-201ENST00000254630 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
PTCD3-201ENST00000254630 Q9BRP9 147 aa6.19□□□□□ -1.42
PTCD3-201ENST00000254630 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
PTCD3-201ENST00000254630 PCNX2A6NKB5 2137 aa6.19□□□□□ -1.42
PTCD3-201ENST00000254630 Q6ZVQ6 151 aa6.19□□□□□ -1.42
PTCD3-201ENST00000254630 URB1-AS1Q96HZ7 61 aa6.19□□□□□ -1.42
PTCD3-201ENST00000254630 Q8N9L7 120 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 FAM240AA0A1B0GVK7 77 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 LINC01561Q8N1V8 128 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 Q8N2B8 174 aa6.18□□□□□ -1.42
PTCD3-201ENST00000254630 RP1L1Q8IWN7 2480 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-201ENST00000254630 FHL3Q13643 280 aa6.17□□□□□ -1.42
PTCD3-201ENST00000254630 FREM1Q5H8C1 2179 aa6.17□□□□□ -1.42
PTCD3-201ENST00000254630 NTM-AS1Q6ZSK4 140 aa6.17□□□□□ -1.42
PTCD3-201ENST00000254630 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
PTCD3-201ENST00000254630 CELA1Q9UNI1 258 aa6.17□□□□□ -1.42
PTCD3-201ENST00000254630 COL27A1Q8IZC6 1860 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-201ENST00000254630 ADAMTSL4-AS1Q5T5F5 129 aa6.16□□□□□ -1.42
PTCD3-201ENST00000254630 PRR4Q16378 134 aa6.15□□□□□ -1.42
PTCD3-201ENST00000254630 PKDREJQ9NTG1 2253 aa6.14□□□□□ -1.43
PTCD3-201ENST00000254630 FSHBP01225 129 aa6.14□□□□□ -1.43
PTCD3-201ENST00000254630 COX7CP15954 63 aa6.14□□□□□ -1.43
PTCD3-201ENST00000254630 LINC00310P59036 64 aa6.14□□□□□ -1.43
PTCD3-201ENST00000254630 Q6ZRU5 148 aa6.14□□□□□ -1.43
PTCD3-201ENST00000254630 POLEQ07864 2286 aa6.14□□□□□ -1.43
PTCD3-201ENST00000254630 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
PTCD3-201ENST00000254630 LIMD2Q9BT23 127 aa6.13□□□□□ -1.43
PTCD3-201ENST00000254630 A6NED7 52 aa6.13□□□□□ -1.43
PTCD3-201ENST00000254630 ZNF318Q5VUA4 2279 aa6.12□□□□□ -1.43
PTCD3-201ENST00000254630 MDFIQ99750 246 aa6.12□□□□□ -1.43
PTCD3-201ENST00000254630 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
PTCD3-201ENST00000254630 FAM186AA6NE01 2351 aa6.12□□□□□ -1.43
PTCD3-201ENST00000254630 TPRP12270 2363 aaKnown RBP6.12□□□□□ -1.43
PTCD3-201ENST00000254630 CEP250Q9BV73 2442 aa6.12□□□□□ -1.43
PTCD3-201ENST00000254630 XGP55808 180 aa6.11□□□□□ -1.43
PTCD3-201ENST00000254630 C11orf72Q8NBR9 251 aa6.11□□□□□ -1.43
PTCD3-201ENST00000254630 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
PTCD3-201ENST00000254630 LINC00575Q6W349 94 aa6.11□□□□□ -1.43
PTCD3-201ENST00000254630 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
PTCD3-201ENST00000254630 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
PTCD3-201ENST00000254630 WNK2Q9Y3S1 2297 aa6.1□□□□□ -1.43
PTCD3-201ENST00000254630 PRLHP81277 87 aa6.1□□□□□ -1.43
PTCD3-201ENST00000254630 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
PTCD3-201ENST00000254630 Q6Q795 121 aa6.09□□□□□ -1.43
PTCD3-201ENST00000254630 APC2O95996 2303 aa6.09□□□□□ -1.43
PTCD3-201ENST00000254630 LINC00208Q96KT6 92 aa6.09□□□□□ -1.43
PTCD3-201ENST00000254630 TET2Q6N021 2002 aaPredicted RBP6.09□□□□□ -1.44
PTCD3-201ENST00000254630 H0Y9P7 68 aa6.09□□□□□ -1.44
PTCD3-201ENST00000254630 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.44
PTCD3-201ENST00000254630 DEFB116Q30KQ4 102 aa6.09□□□□□ -1.44
PTCD3-201ENST00000254630 PCSK5Q92824 1860 aa6.09□□□□□ -1.44
PTCD3-201ENST00000254630 ACACAQ13085 2346 aa6.08□□□□□ -1.44
PTCD3-201ENST00000254630 A0A096LNJ9 63 aa6.08□□□□□ -1.44
PTCD3-201ENST00000254630 SMCR5Q8TEV8 140 aa6.08□□□□□ -1.44
PTCD3-201ENST00000254630 X6R8D5 127 aa6.08□□□□□ -1.44
PTCD3-201ENST00000254630 SBSPONQ8IVN8 264 aa6.08□□□□□ -1.44
PTCD3-201ENST00000254630 PTPRBP23467 1997 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 A0A087WSZ3 146 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 HCG22E2RYF7 251 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 A8MTW9 85 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 SHANK1Q9Y566 2161 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 PCOTHQ58A44 107 aa6.07□□□□□ -1.44
PTCD3-201ENST00000254630 EP300Q09472 2414 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms