RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 DPH3Q96FX2 82 aa6.43□□□□□ -1.38
VPS50-201ENST00000251739 TMEM250H0YL14 139 aa6.42□□□□□ -1.38
VPS50-201ENST00000251739 GAS8-AS1O95177 125 aa6.42□□□□□ -1.38
VPS50-201ENST00000251739 TSHBP01222 138 aa6.42□□□□□ -1.38
VPS50-201ENST00000251739 RNASEKQ6P5S7 137 aaKnown RBP6.42□□□□□ -1.38
VPS50-201ENST00000251739 MTURNQ8N3F0 131 aa6.42□□□□□ -1.38
VPS50-201ENST00000251739 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
VPS50-201ENST00000251739 LINC00959A0A1B0GUT2 108 aa6.41□□□□□ -1.38
VPS50-201ENST00000251739 I3L3M4 83 aa6.41□□□□□ -1.38
VPS50-201ENST00000251739 PPBPP02775 128 aa6.41□□□□□ -1.38
VPS50-201ENST00000251739 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
VPS50-201ENST00000251739 KRTAP10-8P60410 259 aa6.41□□□□□ -1.38
VPS50-201ENST00000251739 IGHV1-58A0A0C4DH39 117 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 PPP1R2P9O14990 202 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 CCL25O15444 150 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 XCL1P47992 114 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.38
VPS50-201ENST00000251739 LYPD6BQ8NI32 183 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 LINC00474Q9P2X8 69 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 PKIGQ9Y2B9 76 aa6.4□□□□□ -1.38
VPS50-201ENST00000251739 COLCA2A8K830 154 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 A8MWL6 223 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 SRSF9Q13242 221 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS50-201ENST00000251739 RHEBQ15382 184 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 SPINK6Q6UWN8 80 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 LINC00526Q96FQ7 95 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 CARD19Q96LW7 228 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
VPS50-201ENST00000251739 C20orf202A1L168 122 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 RAB5AP20339 215 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 MRAP2Q96G30 205 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 TMEM101Q96IK0 257 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 BTF3L4Q96K17 158 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 ST20Q9HBF5 79 aa6.38□□□□□ -1.39
VPS50-201ENST00000251739 A0A1B0GUT8 65 aa6.37□□□□□ -1.39
VPS50-201ENST00000251739 SCGB1A1P11684 91 aa6.37□□□□□ -1.39
VPS50-201ENST00000251739 PMCHP20382 165 aa6.37□□□□□ -1.39
VPS50-201ENST00000251739 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
VPS50-201ENST00000251739 ALKAL2Q6UX46 152 aa6.37□□□□□ -1.39
VPS50-201ENST00000251739 SMDT1Q9H4I9 107 aa6.37□□□□□ -1.39
VPS50-201ENST00000251739 C7orf77A4D0Y5 90 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 CAMPP49913 170 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 COL5A1-AS1Q5SY13 56 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 Q6ZRP5 223 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 LINC01551Q86U37 167 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 ZNF664Q8N3J9 261 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 TSKUQ8WUA8 353 aa6.36□□□□□ -1.39
VPS50-201ENST00000251739 CSDC2Q9Y534 153 aaKnown RBP6.36□□□□□ -1.39
VPS50-201ENST00000251739 A0A1B0GV72 72 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 TMEM238C9JI98 176 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 K7ERU9 68 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 SS18Q15532 418 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 TMEM241Q24JQ0 296 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 PYY3Q5JQD4 70 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 CBLN2Q8IUK8 224 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 NRACQ8N912 160 aa6.35□□□□□ -1.39
VPS50-201ENST00000251739 IGLV4-69A0A075B6H9 119 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 LOC107984640A0A0U1RRK4 108 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
VPS50-201ENST00000251739 AMN1Q8IY45 258 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 NUP35Q8NFH5 326 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 ORAOV1Q8WV07 137 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 SMIM7Q9BQ49 75 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 OSTCQ9NRP0 149 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
VPS50-201ENST00000251739 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 SMKR1H3BMG3 65 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
VPS50-201ENST00000251739 COX7A2LO14548 114 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 MALP21145 153 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 ISOC2Q96AB3 205 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 C2orf48Q96LS8 159 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 VPS25Q9BRG1 176 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 V9GYV3 84 aa6.33□□□□□ -1.4
VPS50-201ENST00000251739 LPAP08519 4548 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 VCYO14598 125 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 APOMO95445 188 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 SUMO2P61956 95 aaKnown RBP6.32□□□□□ -1.4
VPS50-201ENST00000251739 Q6ZUT4 128 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 OR10D4PQ8NGN7 298 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 FAM104AQ969W3 186 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 TIMM21Q9BVV7 248 aa6.32□□□□□ -1.4
VPS50-201ENST00000251739 PPP1R17O96001 155 aa6.31□□□□□ -1.4
VPS50-201ENST00000251739 SRP19P09132 144 aaKnown RBP6.31□□□□□ -1.4
VPS50-201ENST00000251739 GAGE2BQ13066 116 aa6.31□□□□□ -1.4
VPS50-201ENST00000251739 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
VPS50-201ENST00000251739 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
VPS50-201ENST00000251739 PSORS1C2Q9UIG4 136 aa6.31□□□□□ -1.4
VPS50-201ENST00000251739 ZNF727A8MUV8 499 aa6.3□□□□□ -1.4
VPS50-201ENST00000251739 FCER1GP30273 86 aa6.3□□□□□ -1.4
VPS50-201ENST00000251739 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
VPS50-201ENST00000251739 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
VPS50-201ENST00000251739 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms