RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 LINC00694P0DN24 101 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 COX6A2Q02221 97 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 VSIG2Q96IQ7 327 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 IGHV1-58A0A0C4DH39 117 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 CLPSL2Q6UWE3 100 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 SDIM1Q6ZPB5 146 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 GCN1Q92616 2671 aaKnown RBP7.25□□□□□ -1.25
COPB1-201ENST00000249923 ZNF415Q09FC8 603 aa7.24□□□□□ -1.25
COPB1-201ENST00000249923 A0A0B4J2C4 111 aa7.24□□□□□ -1.25
COPB1-201ENST00000249923 F8P00451 2351 aa7.24□□□□□ -1.25
COPB1-201ENST00000249923 SLPIP03973 132 aa7.24□□□□□ -1.25
COPB1-201ENST00000249923 GIG44P09565 113 aaPredicted RBP7.24□□□□□ -1.25
COPB1-201ENST00000249923 DAZ2Q13117 558 aaKnown RBP7.24□□□□□ -1.25
COPB1-201ENST00000249923 DAZ4Q86SG3 579 aaKnown RBP7.24□□□□□ -1.25
COPB1-201ENST00000249923 DAZ3Q9NR90 486 aaKnown RBP7.24□□□□□ -1.25
COPB1-201ENST00000249923 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 HIST2H2BCQ6DN03 193 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 WFDC11Q8NEX6 87 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 PEMTQ9UBM1 199 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 A0A096LPF7 62 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 NTM-AS1Q6ZSK4 140 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 YAE1D1Q9NRH1 226 aa7.23□□□□□ -1.25
COPB1-201ENST00000249923 WFDC10AQ9H1F0 79 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 DNAJC9-AS1A6NH13 148 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 C14orf132Q9NPU4 83 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 TRRAPQ9Y4A5 3859 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 INSP01308 110 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 SPANXA1Q9NS26 97 aa7.22□□□□□ -1.25
COPB1-201ENST00000249923 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.25
COPB1-201ENST00000249923 CRPP02741 224 aa7.21□□□□□ -1.25
COPB1-201ENST00000249923 Q6ZTI0 123 aa7.21□□□□□ -1.25
COPB1-201ENST00000249923 PLA2G2AP14555 144 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 MIAQ16674 131 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 SVIPQ8NHG7 77 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 SPANXDQ9BXN6 97 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
COPB1-201ENST00000249923 A0A087WVE0 104 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 RPL35AP18077 110 aaKnown RBP7.2□□□□□ -1.26
COPB1-201ENST00000249923 OTOGQ6ZRI0 2925 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 UNC79Q9P2D8 2635 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 LINC00242Q5T6M2 205 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 HELZ2Q9BYK8 2649 aaKnown RBP7.2□□□□□ -1.26
COPB1-201ENST00000249923 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 LRRC75A-AS1Q8N1F1 130 aa7.2□□□□□ -1.26
COPB1-201ENST00000249923 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
COPB1-201ENST00000249923 WFDC9Q8NEX5 89 aa7.19□□□□□ -1.26
COPB1-201ENST00000249923 M0QXV9 152 aa7.19□□□□□ -1.26
COPB1-201ENST00000249923 DNAJC30Q96LL9 226 aa7.18□□□□□ -1.26
COPB1-201ENST00000249923 CITED2Q99967 270 aaPredicted RBP7.18□□□□□ -1.26
COPB1-201ENST00000249923 IGLV5-39A0A0G2JS06 123 aa7.18□□□□□ -1.26
COPB1-201ENST00000249923 A0A1B0GX51 115 aa7.18□□□□□ -1.26
COPB1-201ENST00000249923 SOSTDC1Q6X4U4 206 aa7.18□□□□□ -1.26
COPB1-201ENST00000249923 H3BT86 120 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 CCL24O00175 119 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 LST1O00453 97 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 STHQ8IWL8 128 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 LINC00308Q8TCZ7 52 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 LECT2O14960 151 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 DEFB130BP0DP73 79 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 DEFB130AP0DP74 79 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 HERVK_113P63121 156 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 MIR7-3HGQ8N6C7 128 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 F5H768 121 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 TIRAPP58753 221 aa7.17□□□□□ -1.26
COPB1-201ENST00000249923 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
COPB1-201ENST00000249923 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
COPB1-201ENST00000249923 NCR3O14931 201 aa7.16□□□□□ -1.26
COPB1-201ENST00000249923 NDUFA1O15239 70 aa7.16□□□□□ -1.26
COPB1-201ENST00000249923 NOP10Q9NPE3 64 aaKnown RBP7.16□□□□□ -1.26
COPB1-201ENST00000249923 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
COPB1-201ENST00000249923 C6orf226Q5I0X4 101 aa7.15□□□□□ -1.26
COPB1-201ENST00000249923 FAM19A3Q7Z5A8 133 aa7.15□□□□□ -1.26
COPB1-201ENST00000249923 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
COPB1-201ENST00000249923 SND1-IT1Q9HBX3 110 aa7.15□□□□□ -1.26
COPB1-201ENST00000249923 K7EQD1 137 aa7.15□□□□□ -1.26
COPB1-201ENST00000249923 TMEM86BQ8N661 226 aa7.15□□□□□ -1.27
COPB1-201ENST00000249923 CSNK1G2-AS1Q8NCQ2 148 aa7.15□□□□□ -1.27
COPB1-201ENST00000249923 XCL1P47992 114 aa7.14□□□□□ -1.27
COPB1-201ENST00000249923 LINC01006Q8NI28 216 aa7.14□□□□□ -1.27
COPB1-201ENST00000249923 CDC42SE2Q9NRR3 84 aa7.14□□□□□ -1.27
COPB1-201ENST00000249923 ANK2Q01484 3957 aa7.14□□□□□ -1.27
COPB1-201ENST00000249923 IGLV10-54A0A075B6I4 117 aa7.14□□□□□ -1.27
COPB1-201ENST00000249923 TRAV25A0A0B4J276 109 aa7.14□□□□□ -1.27
COPB1-201ENST00000249923 TIMM17BO60830 172 aa7.13□□□□□ -1.27
COPB1-201ENST00000249923 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
COPB1-201ENST00000249923 TRAV23DV6A0A075B6W5 121 aa7.13□□□□□ -1.27
COPB1-201ENST00000249923 COX7A2LO14548 114 aa7.13□□□□□ -1.27
COPB1-201ENST00000249923 TMEM126AQ9H061 195 aa7.13□□□□□ -1.27
COPB1-201ENST00000249923 CSDC2Q9Y534 153 aaKnown RBP7.13□□□□□ -1.27
COPB1-201ENST00000249923 FASNP49327 2511 aaKnown RBP7.12□□□□□ -1.27
COPB1-201ENST00000249923 HTN3P15516 51 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms