RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 ACYP1P07311 99 aa11.16□□□□□ -0.62
KNSTRN-201ENST00000249776 DEFB131AP59861 70 aa11.16□□□□□ -0.62
KNSTRN-201ENST00000249776 TTC32Q5I0X7 151 aa11.16□□□□□ -0.62
KNSTRN-201ENST00000249776 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
KNSTRN-201ENST00000249776 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
KNSTRN-201ENST00000249776 LST1O00453 97 aa11.15□□□□□ -0.62
KNSTRN-201ENST00000249776 INSP01308 110 aa11.15□□□□□ -0.62
KNSTRN-201ENST00000249776 GAGE5Q13069 117 aa11.15□□□□□ -0.62
KNSTRN-201ENST00000249776 GAGE6Q13070 117 aa11.15□□□□□ -0.62
KNSTRN-201ENST00000249776 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
KNSTRN-201ENST00000249776 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
KNSTRN-201ENST00000249776 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
KNSTRN-201ENST00000249776 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
KNSTRN-201ENST00000249776 LINC01587Q99440 93 aa11.13□□□□□ -0.63
KNSTRN-201ENST00000249776 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
KNSTRN-201ENST00000249776 KNCNA6PVL3 124 aa11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 HERV-K104P63124 156 aa11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 H7C423 109 aa11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 RBMY1A1P0DJD3 496 aaKnown RBP11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 RBMY1CP0DJD4 496 aa11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
KNSTRN-201ENST00000249776 IGHV3-73A0A0B4J1V6 119 aa11.11□□□□□ -0.63
KNSTRN-201ENST00000249776 TRAV25A0A0B4J276 109 aa11.11□□□□□ -0.63
KNSTRN-201ENST00000249776 DYNLRB2Q8TF09 96 aa11.11□□□□□ -0.63
KNSTRN-201ENST00000249776 HTN1P15515 57 aa11.1□□□□□ -0.63
KNSTRN-201ENST00000249776 SLURP1P55000 103 aa11.1□□□□□ -0.63
KNSTRN-201ENST00000249776 ADAMTSL4-AS1Q5T5F5 129 aa11.1□□□□□ -0.63
KNSTRN-201ENST00000249776 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 NDUFV3P56181 108 aaKnown RBP11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 C15orf53Q8NAA6 179 aa11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 C11orf72Q8NBR9 251 aa11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 MAP6D1Q9H9H5 199 aa11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
KNSTRN-201ENST00000249776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
KNSTRN-201ENST00000249776 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
KNSTRN-201ENST00000249776 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
KNSTRN-201ENST00000249776 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
KNSTRN-201ENST00000249776 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
KNSTRN-201ENST00000249776 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
KNSTRN-201ENST00000249776 COX7A2LO14548 114 aa11.07□□□□□ -0.64
KNSTRN-201ENST00000249776 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
KNSTRN-201ENST00000249776 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
KNSTRN-201ENST00000249776 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 GAGE7O76087 117 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 GAGE4Q13068 117 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 SORL1Q92673 2214 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 TRACP01848 142 aa11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
KNSTRN-201ENST00000249776 TRAV4A0A0B4J268 109 aa11.05□□□□□ -0.64
KNSTRN-201ENST00000249776 SVIPQ8NHG7 77 aa11.05□□□□□ -0.64
KNSTRN-201ENST00000249776 Q6ZSN1 163 aa11.04□□□□□ -0.64
KNSTRN-201ENST00000249776 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
KNSTRN-201ENST00000249776 Q9H8V8 135 aa11.04□□□□□ -0.64
KNSTRN-201ENST00000249776 TRBV7-7A0A0K0K1E9 115 aa11.03□□□□□ -0.64
KNSTRN-201ENST00000249776 NHLRC4P0CG21 123 aaPredicted RBP11.03□□□□□ -0.64
KNSTRN-201ENST00000249776 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
KNSTRN-201ENST00000249776 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
KNSTRN-201ENST00000249776 COL7A1Q02388 2944 aa11.03□□□□□ -0.64
KNSTRN-201ENST00000249776 K7EQD1 137 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 IGLV1-51P01701 117 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 LINC00242Q5T6M2 205 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 STHQ8IWL8 128 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 IL17DQ8TAD2 202 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 CLEC2BQ92478 149 aa11.02□□□□□ -0.65
KNSTRN-201ENST00000249776 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
KNSTRN-201ENST00000249776 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
KNSTRN-201ENST00000249776 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
KNSTRN-201ENST00000249776 NPC2P61916 151 aa11.01□□□□□ -0.65
KNSTRN-201ENST00000249776 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
KNSTRN-201ENST00000249776 SMIM1B2RUZ4 78 aa11□□□□□ -0.65
KNSTRN-201ENST00000249776 UBE2L6O14933 153 aa10.99□□□□□ -0.65
KNSTRN-201ENST00000249776 ATP5G1P05496 136 aa10.99□□□□□ -0.65
KNSTRN-201ENST00000249776 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
KNSTRN-201ENST00000249776 A8MZ25 164 aa10.98□□□□□ -0.65
KNSTRN-201ENST00000249776 LINC00643Q86TS7 51 aa10.98□□□□□ -0.65
KNSTRN-201ENST00000249776 CDC42SE2Q9NRR3 84 aa10.98□□□□□ -0.65
KNSTRN-201ENST00000249776 NACAE9PAV3 2078 aa10.97□□□□□ -0.65
KNSTRN-201ENST00000249776 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
KNSTRN-201ENST00000249776 COX6A2Q02221 97 aa10.97□□□□□ -0.65
KNSTRN-201ENST00000249776 TMEM243Q9BU79 118 aa10.97□□□□□ -0.65
KNSTRN-201ENST00000249776 DAND5Q8N907 189 aa10.96□□□□□ -0.65
KNSTRN-201ENST00000249776 B5MCH6 92 aa10.95□□□□□ -0.66
KNSTRN-201ENST00000249776 CXCL5P42830 114 aa10.95□□□□□ -0.66
KNSTRN-201ENST00000249776 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
KNSTRN-201ENST00000249776 WWC2-AS2Q96NR7 200 aa10.95□□□□□ -0.66
KNSTRN-201ENST00000249776 DNAH9Q9NYC9 4486 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms