RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 DEFB130AP0DP74 79 aa12.26□□□□□ -0.45
LRFN3-201ENST00000246529 FOXI1Q12951 378 aa12.26□□□□□ -0.45
LRFN3-201ENST00000246529 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
LRFN3-201ENST00000246529 TRIAP1O43715 76 aa12.26□□□□□ -0.45
LRFN3-201ENST00000246529 CRLF1O75462 422 aa12.26□□□□□ -0.45
LRFN3-201ENST00000246529 GAGE6Q13070 117 aa12.26□□□□□ -0.45
LRFN3-201ENST00000246529 GTSF1LQ9H1H1 148 aa12.26□□□□□ -0.45
LRFN3-201ENST00000246529 IGKV3OR2-268A0A0C4DH90 116 aa12.25□□□□□ -0.45
LRFN3-201ENST00000246529 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
LRFN3-201ENST00000246529 C9JAW5 83 aa12.24□□□□□ -0.45
LRFN3-201ENST00000246529 F5H768 121 aa12.24□□□□□ -0.45
LRFN3-201ENST00000246529 FAM19A3Q7Z5A8 133 aa12.24□□□□□ -0.45
LRFN3-201ENST00000246529 CARD19Q96LW7 228 aa12.24□□□□□ -0.45
LRFN3-201ENST00000246529 SCGB1A1P11684 91 aa12.23□□□□□ -0.45
LRFN3-201ENST00000246529 TENM1Q9UKZ4 2725 aa12.23□□□□□ -0.45
LRFN3-201ENST00000246529 INAFM1C9JVW0 142 aa12.22□□□□□ -0.45
LRFN3-201ENST00000246529 TIMM17BO60830 172 aa12.22□□□□□ -0.45
LRFN3-201ENST00000246529 IGLV4-60A0A075B6I1 120 aa12.22□□□□□ -0.45
LRFN3-201ENST00000246529 ANKRD29Q8N6D5 301 aa12.22□□□□□ -0.45
LRFN3-201ENST00000246529 ATP6V0E2Q8NHE4 81 aa12.22□□□□□ -0.45
LRFN3-201ENST00000246529 SLC25A20O43772 301 aa12.21□□□□□ -0.45
LRFN3-201ENST00000246529 TEN1Q86WV5 123 aa12.21□□□□□ -0.45
LRFN3-201ENST00000246529 ICOSQ9Y6W8 199 aa12.21□□□□□ -0.45
LRFN3-201ENST00000246529 PRIMA1Q86XR5 153 aa12.2□□□□□ -0.46
LRFN3-201ENST00000246529 TRBV6-8A0A0A6YYG3 113 aa12.2□□□□□ -0.46
LRFN3-201ENST00000246529 TRBV30A0A0K0K1B3 111 aa12.2□□□□□ -0.46
LRFN3-201ENST00000246529 LINC00308Q8TCZ7 52 aa12.2□□□□□ -0.46
LRFN3-201ENST00000246529 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
LRFN3-201ENST00000246529 RPL13AP40429 203 aaKnown RBP12.19□□□□□ -0.46
LRFN3-201ENST00000246529 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
LRFN3-201ENST00000246529 SPATA25Q9BR10 227 aa12.19□□□□□ -0.46
LRFN3-201ENST00000246529 SOSTDC1Q6X4U4 206 aa12.19□□□□□ -0.46
LRFN3-201ENST00000246529 IFITM1P13164 125 aa12.18□□□□□ -0.46
LRFN3-201ENST00000246529 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
LRFN3-201ENST00000246529 ATXN8Q156A1 80 aa12.18□□□□□ -0.46
LRFN3-201ENST00000246529 SIGMAR1Q99720 223 aa12.18□□□□□ -0.46
LRFN3-201ENST00000246529 MEIG1Q5JSS6 88 aa12.18□□□□□ -0.46
LRFN3-201ENST00000246529 X6R8D5 127 aa12.18□□□□□ -0.46
LRFN3-201ENST00000246529 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
LRFN3-201ENST00000246529 PPDPFLQ8WWR9 84 aa12.17□□□□□ -0.46
LRFN3-201ENST00000246529 CLEC2BQ92478 149 aa12.17□□□□□ -0.46
LRFN3-201ENST00000246529 NSD1Q96L73 2696 aaPredicted RBP12.17□□□□□ -0.46
LRFN3-201ENST00000246529 DEFB4AO15263 64 aa12.16□□□□□ -0.46
LRFN3-201ENST00000246529 A0A096LPF7 62 aa12.15□□□□□ -0.46
LRFN3-201ENST00000246529 GYPEP15421 78 aa12.15□□□□□ -0.46
LRFN3-201ENST00000246529 H7C423 109 aa12.15□□□□□ -0.46
LRFN3-201ENST00000246529 RNF183Q96D59 192 aa12.15□□□□□ -0.46
LRFN3-201ENST00000246529 TOMM7Q9P0U1 55 aa12.15□□□□□ -0.46
LRFN3-201ENST00000246529 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
LRFN3-201ENST00000246529 CDIP1Q9H305 208 aa12.14□□□□□ -0.47
LRFN3-201ENST00000246529 A0A1B0GV72 72 aa12.13□□□□□ -0.47
LRFN3-201ENST00000246529 LINC00612Q8N6U2 182 aa12.13□□□□□ -0.47
LRFN3-201ENST00000246529 DEFB135Q30KP9 77 aa12.12□□□□□ -0.47
LRFN3-201ENST00000246529 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
LRFN3-201ENST00000246529 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
LRFN3-201ENST00000246529 NTN5Q8WTR8 489 aaPredicted RBP12.12□□□□□ -0.47
LRFN3-201ENST00000246529 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
LRFN3-201ENST00000246529 COX6CP09669 75 aa12.11□□□□□ -0.47
LRFN3-201ENST00000246529 HIVEP1P15822 2718 aa12.11□□□□□ -0.47
LRFN3-201ENST00000246529 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
LRFN3-201ENST00000246529 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
LRFN3-201ENST00000246529 IGHV3OR16-9A0A0B4J2B5 98 aa12.1□□□□□ -0.47
LRFN3-201ENST00000246529 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
LRFN3-201ENST00000246529 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
LRFN3-201ENST00000246529 HERV-K104P63124 156 aa12.1□□□□□ -0.47
LRFN3-201ENST00000246529 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
LRFN3-201ENST00000246529 ATRQ13535 2644 aa12.09□□□□□ -0.47
LRFN3-201ENST00000246529 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
LRFN3-201ENST00000246529 LINC00959A0A1B0GUT2 108 aa12.07□□□□□ -0.48
LRFN3-201ENST00000246529 M0QXV9 152 aa12.07□□□□□ -0.48
LRFN3-201ENST00000246529 LST1O00453 97 aa12.07□□□□□ -0.48
LRFN3-201ENST00000246529 C2orf82Q6UX34 121 aa12.07□□□□□ -0.48
LRFN3-201ENST00000246529 MIR7-3HGQ8N6C7 128 aa12.07□□□□□ -0.48
LRFN3-201ENST00000246529 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
LRFN3-201ENST00000246529 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
LRFN3-201ENST00000246529 SMIM9A6NGZ8 99 aa12.06□□□□□ -0.48
LRFN3-201ENST00000246529 MT-ATP8P03928 68 aa12.06□□□□□ -0.48
LRFN3-201ENST00000246529 XCL1P47992 114 aa12.06□□□□□ -0.48
LRFN3-201ENST00000246529 XGP55808 180 aa12.06□□□□□ -0.48
LRFN3-201ENST00000246529 PAX4O43316 350 aa12.05□□□□□ -0.48
LRFN3-201ENST00000246529 A0A087WZ39 114 aa12.05□□□□□ -0.48
LRFN3-201ENST00000246529 IGHV4-28A0A0C4DH34 117 aa12.04□□□□□ -0.48
LRFN3-201ENST00000246529 Q8N3U1 123 aa12.04□□□□□ -0.48
LRFN3-201ENST00000246529 LINC00158P58513 81 aa12.04□□□□□ -0.48
LRFN3-201ENST00000246529 COPS9Q8WXC6 57 aa12.04□□□□□ -0.48
LRFN3-201ENST00000246529 CKS1BP61024 79 aa12.03□□□□□ -0.48
LRFN3-201ENST00000246529 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
LRFN3-201ENST00000246529 TEP1Q99973 2627 aaKnown RBP12.03□□□□□ -0.48
LRFN3-201ENST00000246529 PFN2P35080 140 aa12.02□□□□□ -0.48
LRFN3-201ENST00000246529 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.48
LRFN3-201ENST00000246529 CITED1Q99966 193 aa12.02□□□□□ -0.49
LRFN3-201ENST00000246529 LYRM9A8MSI8 78 aa12.01□□□□□ -0.49
LRFN3-201ENST00000246529 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
LRFN3-201ENST00000246529 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
LRFN3-201ENST00000246529 COX7A2LO14548 114 aa12□□□□□ -0.49
LRFN3-201ENST00000246529 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
LRFN3-201ENST00000246529 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
LRFN3-201ENST00000246529 IGKV2D-28P01615 120 aa12□□□□□ -0.49
LRFN3-201ENST00000246529 APOC4P55056 127 aa12□□□□□ -0.49
LRFN3-201ENST00000246529 LINC00337Q8N6G1 96 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms