RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 A0A1B0GUV1 79 aa16.2■□□□□ 0.18
MSX2-201ENST00000239243 TIMM17BO60830 172 aa16.19■□□□□ 0.18
MSX2-201ENST00000239243 F5H768 121 aa16.19■□□□□ 0.18
MSX2-201ENST00000239243 SPANXDQ9BXN6 97 aa16.19■□□□□ 0.18
MSX2-201ENST00000239243 SPANXCQ9NY87 97 aa16.19■□□□□ 0.18
MSX2-201ENST00000239243 LITAFQ99732 161 aa16.18■□□□□ 0.18
MSX2-201ENST00000239243 BAHCC1Q9P281 2608 aa16.18■□□□□ 0.18
MSX2-201ENST00000239243 CYSRT1A8MQ03 144 aa16.17■□□□□ 0.18
MSX2-201ENST00000239243 TMEM262E9PQX1 116 aa16.17■□□□□ 0.18
MSX2-201ENST00000239243 APOMO95445 188 aa16.17■□□□□ 0.18
MSX2-201ENST00000239243 SH2D6Q7Z4S9 175 aa16.17■□□□□ 0.18
MSX2-201ENST00000239243 MUSTN1Q8IVN3 82 aa16.17■□□□□ 0.18
MSX2-201ENST00000239243 PGPEP1Q9NXJ5 209 aa16.17■□□□□ 0.18
MSX2-201ENST00000239243 A0A096LPF7 62 aa16.16■□□□□ 0.18
MSX2-201ENST00000239243 MRPL23Q16540 153 aaKnown RBP16.16■□□□□ 0.18
MSX2-201ENST00000239243 CIRBPQ14011 172 aaKnown RBP16.15■□□□□ 0.18
MSX2-201ENST00000239243 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.15■□□□□ 0.18
MSX2-201ENST00000239243 IGKV3OR2-268A0A0C4DH90 116 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 A4D1N5 150 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 CFC1BP0CG36 223 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 CFC1P0CG37 223 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 RBX1P62877 108 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 MIAQ16674 131 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 FBN1P35555 2871 aaKnown RBP16.14■□□□□ 0.17
MSX2-201ENST00000239243 Q9H8V8 135 aa16.14■□□□□ 0.17
MSX2-201ENST00000239243 HTN3P15516 51 aa16.13■□□□□ 0.17
MSX2-201ENST00000239243 ICOSQ9Y6W8 199 aa16.13■□□□□ 0.17
MSX2-201ENST00000239243 PRSS2P07478 247 aa16.12■□□□□ 0.17
MSX2-201ENST00000239243 HERV-K104P63124 156 aa16.12■□□□□ 0.17
MSX2-201ENST00000239243 PRO1854Q9UHT4 67 aa16.12■□□□□ 0.17
MSX2-201ENST00000239243 A0A0B4J2C4 111 aa16.11■□□□□ 0.17
MSX2-201ENST00000239243 LINC00959A0A1B0GUT2 108 aa16.11■□□□□ 0.17
MSX2-201ENST00000239243 IGHV3OR16-9A0A0B4J2B5 98 aa16.11■□□□□ 0.17
MSX2-201ENST00000239243 IFITM1P13164 125 aa16.11■□□□□ 0.17
MSX2-201ENST00000239243 ADAMTSL4-AS1Q5T5F5 129 aa16.11■□□□□ 0.17
MSX2-201ENST00000239243 TSPAN13O95857 204 aa16.1■□□□□ 0.17
MSX2-201ENST00000239243 G3V4G9 280 aa16.1■□□□□ 0.17
MSX2-201ENST00000239243 SS18Q15532 418 aa16.1■□□□□ 0.17
MSX2-201ENST00000239243 C11orf68Q9H3H3 251 aaKnown RBP16.1■□□□□ 0.17
MSX2-201ENST00000239243 STAB1Q9NY15 2570 aa16.1■□□□□ 0.17
MSX2-201ENST00000239243 LYRM7Q5U5X0 104 aa16.09■□□□□ 0.17
MSX2-201ENST00000239243 ZNF625Q96I27 306 aaPredicted RBP16.09■□□□□ 0.17
MSX2-201ENST00000239243 RETNQ9HD89 108 aa16.09■□□□□ 0.17
MSX2-201ENST00000239243 A0A087WZ39 114 aa16.08■□□□□ 0.16
MSX2-201ENST00000239243 COX7B2Q8TF08 81 aa16.07■□□□□ 0.16
MSX2-201ENST00000239243 COPS9Q8WXC6 57 aa16.07■□□□□ 0.16
MSX2-201ENST00000239243 LELP1Q5T871 98 aa16.06■□□□□ 0.16
MSX2-201ENST00000239243 MAST4O15021 2626 aa16.04■□□□□ 0.16
MSX2-201ENST00000239243 H3BNG1 76 aa16.04■□□□□ 0.16
MSX2-201ENST00000239243 MEIG1Q5JSS6 88 aa16.04■□□□□ 0.16
MSX2-201ENST00000239243 SFTA2Q6UW10 78 aa16.03■□□□□ 0.16
MSX2-201ENST00000239243 LINC01561Q8N1V8 128 aa16.02■□□□□ 0.16
MSX2-201ENST00000239243 ERG28Q9UKR5 140 aa16.02■□□□□ 0.16
MSX2-201ENST00000239243 LOC107984156A0A0G2JMH3 177 aa16.02■□□□□ 0.15
MSX2-201ENST00000239243 IGHV3-33P01772 117 aa16.02■□□□□ 0.15
MSX2-201ENST00000239243 ARL17AQ8IVW1 177 aa16.02■□□□□ 0.15
MSX2-201ENST00000239243 TOMM7Q9P0U1 55 aa16.01■□□□□ 0.15
MSX2-201ENST00000239243 ANGP03950 147 aaKnown RBP16■□□□□ 0.15
MSX2-201ENST00000239243 XCL1P47992 114 aa16■□□□□ 0.15
MSX2-201ENST00000239243 C5orf38Q86SI9 138 aa16■□□□□ 0.15
MSX2-201ENST00000239243 EIF4EBP3O60516 100 aaPredicted RBP16■□□□□ 0.15
MSX2-201ENST00000239243 LINC00269Q8N2A0 174 aa16■□□□□ 0.15
MSX2-201ENST00000239243 NPC2P61916 151 aa15.99■□□□□ 0.15
MSX2-201ENST00000239243 CLPSL2Q6UWE3 100 aa15.99■□□□□ 0.15
MSX2-201ENST00000239243 DAND5Q8N907 189 aa15.99■□□□□ 0.15
MSX2-201ENST00000239243 LINC00308Q8TCZ7 52 aa15.99■□□□□ 0.15
MSX2-201ENST00000239243 PPDPFQ9H3Y8 114 aa15.99■□□□□ 0.15
MSX2-201ENST00000239243 F8W1H4 67 aa15.98■□□□□ 0.15
MSX2-201ENST00000239243 H3BMG7 143 aa15.98■□□□□ 0.15
MSX2-201ENST00000239243 REG3AQ06141 175 aa15.98■□□□□ 0.15
MSX2-201ENST00000239243 CMYA5Q8N3K9 4069 aa15.98■□□□□ 0.15
MSX2-201ENST00000239243 TRBV20-1A0A075B6N2 111 aa15.96■□□□□ 0.15
MSX2-201ENST00000239243 CD164L2Q6UWJ8 174 aa15.96■□□□□ 0.15
MSX2-201ENST00000239243 Q6ZTC4 211 aa15.96■□□□□ 0.15
MSX2-201ENST00000239243 Q1RN00 199 aa15.95■□□□□ 0.14
MSX2-201ENST00000239243 LYPD5Q6UWN5 251 aa15.95■□□□□ 0.14
MSX2-201ENST00000239243 PKD1L1Q8TDX9 2849 aa15.95■□□□□ 0.14
MSX2-201ENST00000239243 A0A0J9YWU9 116 aa15.95■□□□□ 0.14
MSX2-201ENST00000239243 PSMB2P49721 201 aa15.95■□□□□ 0.14
MSX2-201ENST00000239243 A0A0U1RRA0 63 aa15.94■□□□□ 0.14
MSX2-201ENST00000239243 KPRPQ5T749 579 aaPredicted RBP15.94■□□□□ 0.14
MSX2-201ENST00000239243 SCGB1C2P0DMR2 95 aa15.94■□□□□ 0.14
MSX2-201ENST00000239243 Q8IZM0 81 aa15.93■□□□□ 0.14
MSX2-201ENST00000239243 CHCHD10Q8WYQ3 142 aaPredicted RBP15.93■□□□□ 0.14
MSX2-201ENST00000239243 C6orf226Q5I0X4 101 aa15.92■□□□□ 0.14
MSX2-201ENST00000239243 COL6A5A8TX70 2615 aa15.92■□□□□ 0.14
MSX2-201ENST00000239243 H7C2G1 150 aa15.92■□□□□ 0.14
MSX2-201ENST00000239243 COX7A2LO14548 114 aa15.92■□□□□ 0.14
MSX2-201ENST00000239243 C11orf45Q8TAV5 145 aa15.92■□□□□ 0.14
MSX2-201ENST00000239243 IBA57-AS1B1ANH7 110 aa15.91■□□□□ 0.14
MSX2-201ENST00000239243 OCIAD2Q56VL3 154 aa15.91■□□□□ 0.14
MSX2-201ENST00000239243 Q8N3U1 123 aa15.91■□□□□ 0.14
MSX2-201ENST00000239243 SPATA25Q9BR10 227 aa15.91■□□□□ 0.14
MSX2-201ENST00000239243 TRBV30A0A0K0K1B3 111 aa15.9■□□□□ 0.14
MSX2-201ENST00000239243 DNAH3Q8TD57 4116 aa15.89■□□□□ 0.14
MSX2-201ENST00000239243 K7ERU9 68 aa15.88■□□□□ 0.13
MSX2-201ENST00000239243 PRR34Q9NV39 138 aa15.88■□□□□ 0.13
MSX2-201ENST00000239243 TCL1BO95988 128 aa15.88■□□□□ 0.13
MSX2-201ENST00000239243 SOSTDC1Q6X4U4 206 aa15.88■□□□□ 0.13
MSX2-201ENST00000239243 IGLV10-54A0A075B6I4 117 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms