RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PCOTHQ58A44 107 aa8.3□□□□□ -1.08
MSH6-201ENST00000234420 SMIM11BQ8TCY0 68 aa8.29□□□□□ -1.08
MSH6-201ENST00000234420 RSPO1Q2MKA7 263 aaPredicted RBP8.29□□□□□ -1.08
MSH6-201ENST00000234420 CPAMD8Q8IZJ3 1885 aa8.29□□□□□ -1.08
MSH6-201ENST00000234420 BBC3Q96PG8 261 aaPredicted RBP8.29□□□□□ -1.08
MSH6-201ENST00000234420 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
MSH6-201ENST00000234420 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
MSH6-201ENST00000234420 IGLV11-55A0A075B6I3 123 aa8.28□□□□□ -1.08
MSH6-201ENST00000234420 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
MSH6-201ENST00000234420 C1orf137Q5JT78 98 aa8.28□□□□□ -1.08
MSH6-201ENST00000234420 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
MSH6-201ENST00000234420 LINC01548A6NM66 108 aa8.28□□□□□ -1.08
MSH6-201ENST00000234420 ZFHX2Q9C0A1 2572 aaPredicted RBP8.28□□□□□ -1.08
MSH6-201ENST00000234420 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.08
MSH6-201ENST00000234420 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.08
MSH6-201ENST00000234420 HIVEP3Q5T1R4 2406 aa8.27□□□□□ -1.09
MSH6-201ENST00000234420 LOC100131303A0A0U1RQF7 123 aa8.27□□□□□ -1.09
MSH6-201ENST00000234420 IGLV1-44P01699 117 aa8.27□□□□□ -1.09
MSH6-201ENST00000234420 Q6ZS46 218 aa8.26□□□□□ -1.09
MSH6-201ENST00000234420 SPINT4Q6UDR6 99 aa8.26□□□□□ -1.09
MSH6-201ENST00000234420 PROK1P58294 105 aa8.25□□□□□ -1.09
MSH6-201ENST00000234420 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
MSH6-201ENST00000234420 WISP2O76076 250 aa8.25□□□□□ -1.09
MSH6-201ENST00000234420 Q6YL49 198 aa8.25□□□□□ -1.09
MSH6-201ENST00000234420 ESRGQ1W209 222 aa8.25□□□□□ -1.09
MSH6-201ENST00000234420 CRIP2P52943 208 aaPredicted RBP8.25□□□□□ -1.09
MSH6-201ENST00000234420 E7EUB6 86 aa8.24□□□□□ -1.09
MSH6-201ENST00000234420 Q8N3U1 123 aa8.24□□□□□ -1.09
MSH6-201ENST00000234420 Q9UF83 564 aa8.24□□□□□ -1.09
MSH6-201ENST00000234420 TNFRSF13BO14836 293 aaPredicted RBP8.24□□□□□ -1.09
MSH6-201ENST00000234420 LINC01547P58512 204 aaPredicted RBP8.24□□□□□ -1.09
MSH6-201ENST00000234420 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
MSH6-201ENST00000234420 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
MSH6-201ENST00000234420 YPEL4Q96NS1 127 aa8.24□□□□□ -1.09
MSH6-201ENST00000234420 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
MSH6-201ENST00000234420 Q8N6K4 173 aa8.23□□□□□ -1.09
MSH6-201ENST00000234420 NRACQ8N912 160 aa8.22□□□□□ -1.09
MSH6-201ENST00000234420 ZNF706Q9Y5V0 76 aaPredicted RBP8.22□□□□□ -1.09
MSH6-201ENST00000234420 NTM-AS1Q6ZSK4 140 aa8.21□□□□□ -1.09
MSH6-201ENST00000234420 Q8N7P7 452 aa8.21□□□□□ -1.09
MSH6-201ENST00000234420 Q8NA96 180 aa8.21□□□□□ -1.09
MSH6-201ENST00000234420 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.09
MSH6-201ENST00000234420 Q6ZSV7 163 aa8.21□□□□□ -1.09
MSH6-201ENST00000234420 IGLV3-1P01715 115 aa8.21□□□□□ -1.1
MSH6-201ENST00000234420 C10orf25Q5T742 122 aa8.21□□□□□ -1.1
MSH6-201ENST00000234420 DEFB116Q30KQ4 102 aa8.2□□□□□ -1.1
MSH6-201ENST00000234420 C11orf53Q8IXP5 236 aa8.2□□□□□ -1.1
MSH6-201ENST00000234420 CUL9Q8IWT3 2517 aa8.2□□□□□ -1.1
MSH6-201ENST00000234420 H0Y9P7 68 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 MBD6Q96DN6 1003 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 MDFIQ99750 246 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 TMEM254Q8TBM7 123 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 GPR179Q6PRD1 2367 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 A0A0J9YX75 114 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 DEFB114Q30KQ6 69 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 SBSPONQ8IVN8 264 aa8.19□□□□□ -1.1
MSH6-201ENST00000234420 CXCL6P80162 114 aa8.18□□□□□ -1.1
MSH6-201ENST00000234420 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
MSH6-201ENST00000234420 PRLHP81277 87 aa8.18□□□□□ -1.1
MSH6-201ENST00000234420 LIMD2Q9BT23 127 aa8.18□□□□□ -1.1
MSH6-201ENST00000234420 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
MSH6-201ENST00000234420 RNF185Q96GF1 192 aa8.17□□□□□ -1.1
MSH6-201ENST00000234420 UTRNP46939 3433 aa8.17□□□□□ -1.1
MSH6-201ENST00000234420 C16orf90A8MZG2 172 aa8.16□□□□□ -1.1
MSH6-201ENST00000234420 COX6B2Q6YFQ2 88 aa8.16□□□□□ -1.1
MSH6-201ENST00000234420 DOPEY1Q5JWR5 2465 aa8.16□□□□□ -1.1
MSH6-201ENST00000234420 SPACA4Q8TDM5 124 aa8.15□□□□□ -1.1
MSH6-201ENST00000234420 M0R378 163 aa8.15□□□□□ -1.11
MSH6-201ENST00000234420 CRIP1P50238 77 aa8.15□□□□□ -1.11
MSH6-201ENST00000234420 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.14□□□□□ -1.11
MSH6-201ENST00000234420 A0A087WYN8 130 aa8.14□□□□□ -1.11
MSH6-201ENST00000234420 K7EMT4 169 aa8.14□□□□□ -1.11
MSH6-201ENST00000234420 M0QY20 66 aa8.14□□□□□ -1.11
MSH6-201ENST00000234420 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
MSH6-201ENST00000234420 LINC01006Q8NI28 216 aa8.14□□□□□ -1.11
MSH6-201ENST00000234420 Q6ZSR3 168 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 A0A1W2PNU3 283 aaPredicted RBP8.13□□□□□ -1.11
MSH6-201ENST00000234420 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 A0A1B0GU69 56 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 TRBV6-8A0A0A6YYG3 113 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 CHTF8P0CG12 524 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 KRTAP10-9P60411 292 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
MSH6-201ENST00000234420 Q8N814 137 aa8.12□□□□□ -1.11
MSH6-201ENST00000234420 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
MSH6-201ENST00000234420 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
MSH6-201ENST00000234420 LRRK2Q5S007 2527 aa8.11□□□□□ -1.11
MSH6-201ENST00000234420 C2orf48Q96LS8 159 aa8.11□□□□□ -1.11
MSH6-201ENST00000234420 IGKV2D-30A0A075B6S6 120 aa8.11□□□□□ -1.11
MSH6-201ENST00000234420 IGKV2-30P06310 120 aa8.11□□□□□ -1.11
MSH6-201ENST00000234420 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
MSH6-201ENST00000234420 TSHBP01222 138 aa8.1□□□□□ -1.11
MSH6-201ENST00000234420 Q6ZTC4 211 aa8.1□□□□□ -1.11
MSH6-201ENST00000234420 CDIP1Q9H305 208 aa8.1□□□□□ -1.11
MSH6-201ENST00000234420 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
MSH6-201ENST00000234420 PRR3P79522 188 aaKnown RBP8.09□□□□□ -1.11
MSH6-201ENST00000234420 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
MSH6-201ENST00000234420 LINC00846Q9NV44 126 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms