RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 IGLV5-39A0A0G2JS06 123 aa16.31■□□□□ 0.2
RRP9-201ENST00000232888 COL5A1-AS1Q5SY13 56 aa16.3■□□□□ 0.2
RRP9-201ENST00000232888 SCGB1D4Q6XE38 83 aa16.3■□□□□ 0.2
RRP9-201ENST00000232888 IGHV3-64A0A075B6Q5 118 aa16.3■□□□□ 0.2
RRP9-201ENST00000232888 TRAV8-3A0A0A6YYJ7 113 aa16.3■□□□□ 0.2
RRP9-201ENST00000232888 IGKV3OR2-268A0A0C4DH90 116 aa16.29■□□□□ 0.2
RRP9-201ENST00000232888 ANGP03950 147 aaKnown RBP16.29■□□□□ 0.2
RRP9-201ENST00000232888 IGHV3OR16-9A0A0B4J2B5 98 aa16.28■□□□□ 0.2
RRP9-201ENST00000232888 SMIM1B2RUZ4 78 aa16.27■□□□□ 0.2
RRP9-201ENST00000232888 ZFAND6Q6FIF0 208 aa16.27■□□□□ 0.2
RRP9-201ENST00000232888 LINC00269Q8N2A0 174 aa16.27■□□□□ 0.2
RRP9-201ENST00000232888 ESRGQ1W209 222 aa16.26■□□□□ 0.19
RRP9-201ENST00000232888 REG3AQ06141 175 aa16.26■□□□□ 0.19
RRP9-201ENST00000232888 LINC01561Q8N1V8 128 aa16.26■□□□□ 0.19
RRP9-201ENST00000232888 ORAOV1Q8WV07 137 aa16.26■□□□□ 0.19
RRP9-201ENST00000232888 NDUFA12Q9UI09 145 aa16.26■□□□□ 0.19
RRP9-201ENST00000232888 A0A087WZ39 114 aa16.25■□□□□ 0.19
RRP9-201ENST00000232888 TM2D2Q9BX73 214 aa16.24■□□□□ 0.19
RRP9-201ENST00000232888 SPANXB1Q9NS25 103 aaPredicted RBP16.24■□□□□ 0.19
RRP9-201ENST00000232888 HIST1H4GQ99525 98 aa16.23■□□□□ 0.19
RRP9-201ENST00000232888 PRR34Q9NV39 138 aa16.23■□□□□ 0.19
RRP9-201ENST00000232888 CEND1Q8N111 149 aa16.22■□□□□ 0.19
RRP9-201ENST00000232888 NDUFA1O15239 70 aa16.21■□□□□ 0.19
RRP9-201ENST00000232888 CD164L2Q6UWJ8 174 aa16.21■□□□□ 0.19
RRP9-201ENST00000232888 A6NDN8 102 aa16.21■□□□□ 0.18
RRP9-201ENST00000232888 Q8N3U1 123 aa16.2■□□□□ 0.18
RRP9-201ENST00000232888 C10orf126Q8N4M7 172 aa16.2■□□□□ 0.18
RRP9-201ENST00000232888 HUWE1Q7Z6Z7 4374 aaKnown RBP16.19■□□□□ 0.18
RRP9-201ENST00000232888 A0A0J9YXY3 114 aa16.19■□□□□ 0.18
RRP9-201ENST00000232888 GCSHP23434 173 aa16.19■□□□□ 0.18
RRP9-201ENST00000232888 XCL1P47992 114 aa16.19■□□□□ 0.18
RRP9-201ENST00000232888 SRSF9Q13242 221 aaKnown RBP eCLIP16.19■□□□□ 0.18
RRP9-201ENST00000232888 CLPSL2Q6UWE3 100 aa16.19■□□□□ 0.18
RRP9-201ENST00000232888 WFDC10BQ8IUB3 73 aa16.19■□□□□ 0.18
RRP9-201ENST00000232888 CHCHD10Q8WYQ3 142 aaPredicted RBP16.18■□□□□ 0.18
RRP9-201ENST00000232888 KLK12Q9UKR0 248 aa16.18■□□□□ 0.18
RRP9-201ENST00000232888 TMEM238C9JI98 176 aa16.17■□□□□ 0.18
RRP9-201ENST00000232888 LINC01556Q5JQF7 62 aa16.17■□□□□ 0.18
RRP9-201ENST00000232888 TRAV8-4A0A0B4J246 113 aa16.17■□□□□ 0.18
RRP9-201ENST00000232888 TIMM17BO60830 172 aa16.17■□□□□ 0.18
RRP9-201ENST00000232888 IGHV3-30P01768 117 aa16.16■□□□□ 0.18
RRP9-201ENST00000232888 IGHV3-33P01772 117 aa16.16■□□□□ 0.18
RRP9-201ENST00000232888 IGHV3-30-5P0DP03 117 aa16.16■□□□□ 0.18
RRP9-201ENST00000232888 HERV-K104P63124 156 aa16.16■□□□□ 0.18
RRP9-201ENST00000232888 C5orf38Q86SI9 138 aa16.16■□□□□ 0.18
RRP9-201ENST00000232888 COX7B2Q8TF08 81 aa16.16■□□□□ 0.18
RRP9-201ENST00000232888 IGLL5B9A064 214 aa16.15■□□□□ 0.18
RRP9-201ENST00000232888 CCL18P55774 89 aa16.15■□□□□ 0.18
RRP9-201ENST00000232888 SFTA2Q6UW10 78 aa16.15■□□□□ 0.18
RRP9-201ENST00000232888 CRPP02741 224 aa16.14■□□□□ 0.17
RRP9-201ENST00000232888 PTTG1IPP53801 180 aa16.14■□□□□ 0.17
RRP9-201ENST00000232888 COX7A2LO14548 114 aa16.13■□□□□ 0.17
RRP9-201ENST00000232888 ENHOQ6UWT2 76 aa16.13■□□□□ 0.17
RRP9-201ENST00000232888 Q6ZVH6 145 aa16.13■□□□□ 0.17
RRP9-201ENST00000232888 ZNF625Q96I27 306 aaPredicted RBP16.13■□□□□ 0.17
RRP9-201ENST00000232888 Q9H8V8 135 aa16.13■□□□□ 0.17
RRP9-201ENST00000232888 FXYD2P54710 66 aa16.13■□□□□ 0.17
RRP9-201ENST00000232888 MIAQ16674 131 aa16.13■□□□□ 0.17
RRP9-201ENST00000232888 TMEM238LA0A1B0GVL6 79 aa16.12■□□□□ 0.17
RRP9-201ENST00000232888 A6NJY4 79 aa16.12■□□□□ 0.17
RRP9-201ENST00000232888 DNAH10OSP0CZ25 163 aa16.12■□□□□ 0.17
RRP9-201ENST00000232888 CIRBPQ14011 172 aaKnown RBP16.12■□□□□ 0.17
RRP9-201ENST00000232888 FOXI1Q12951 378 aa16.1■□□□□ 0.17
RRP9-201ENST00000232888 IGLV10-54A0A075B6I4 117 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 UBE2WQ96B02 151 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 LITAFQ99732 161 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 SPANXDQ9BXN6 97 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 SPANXCQ9NY87 97 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 LINC00588Q9Y4M8 146 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 Q8IZM0 81 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 UPK3BQ9BT76 320 aa16.09■□□□□ 0.17
RRP9-201ENST00000232888 SMIM13P0DJ93 91 aa16.08■□□□□ 0.16
RRP9-201ENST00000232888 TOMM7Q9P0U1 55 aa16.08■□□□□ 0.16
RRP9-201ENST00000232888 DNAH9Q9NYC9 4486 aa16.07■□□□□ 0.16
RRP9-201ENST00000232888 A0A1B0GV90 55 aa16.07■□□□□ 0.16
RRP9-201ENST00000232888 GAGE12HA6NDE8 117 aa16.07■□□□□ 0.16
RRP9-201ENST00000232888 MALP21145 153 aa16.07■□□□□ 0.16
RRP9-201ENST00000232888 TAX1BP3O14907 124 aa16.06■□□□□ 0.16
RRP9-201ENST00000232888 APOMO95445 188 aa16.06■□□□□ 0.16
RRP9-201ENST00000232888 PRSS2P07478 247 aa16.06■□□□□ 0.16
RRP9-201ENST00000232888 A0A1B0GWB2 263 aa16.05■□□□□ 0.16
RRP9-201ENST00000232888 C6orf226Q5I0X4 101 aa16.05■□□□□ 0.16
RRP9-201ENST00000232888 IFITM1P13164 125 aa16.04■□□□□ 0.16
RRP9-201ENST00000232888 RPL24P83731 157 aaKnown RBP16.04■□□□□ 0.16
RRP9-201ENST00000232888 KLK5Q9Y337 293 aaPredicted RBP16.04■□□□□ 0.16
RRP9-201ENST00000232888 NUPR2A6NF83 97 aa16.04■□□□□ 0.16
RRP9-201ENST00000232888 K7EP13 123 aa16.04■□□□□ 0.16
RRP9-201ENST00000232888 CXCL5P42830 114 aa16.04■□□□□ 0.16
RRP9-201ENST00000232888 NHP2Q9NX24 153 aaKnown RBP16.04■□□□□ 0.16
RRP9-201ENST00000232888 COX11Q9Y6N1 276 aa16.04■□□□□ 0.16
RRP9-201ENST00000232888 COPS9Q8WXC6 57 aa16.03■□□□□ 0.16
RRP9-201ENST00000232888 ADAMTSL4-AS1Q5T5F5 129 aa16.02■□□□□ 0.16
RRP9-201ENST00000232888 MEIG1Q5JSS6 88 aa16.01■□□□□ 0.15
RRP9-201ENST00000232888 MUSTN1Q8IVN3 82 aa16.01■□□□□ 0.15
RRP9-201ENST00000232888 APLNQ9ULZ1 77 aa16.01■□□□□ 0.15
RRP9-201ENST00000232888 PPDPFQ9H3Y8 114 aa16■□□□□ 0.15
RRP9-201ENST00000232888 DNHD1Q96M86 4753 aa16■□□□□ 0.15
RRP9-201ENST00000232888 CFAP161Q6P656 301 aa16■□□□□ 0.15
RRP9-201ENST00000232888 IBA57-AS1B1ANH7 110 aa15.99■□□□□ 0.15
RRP9-201ENST00000232888 KIAA0087Q14695 138 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms