RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RNF183Q96D59 192 aa13.36□□□□□ -0.27
YBX3-201ENST00000228251 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
YBX3-201ENST00000228251 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.35□□□□□ -0.27
YBX3-201ENST00000228251 GYPEP15421 78 aa13.35□□□□□ -0.27
YBX3-201ENST00000228251 ZNF625Q96I27 306 aaPredicted RBP13.35□□□□□ -0.27
YBX3-201ENST00000228251 IGHV4-28A0A0C4DH34 117 aa13.35□□□□□ -0.27
YBX3-201ENST00000228251 Q8NAQ8 132 aa13.35□□□□□ -0.27
YBX3-201ENST00000228251 CYSRT1A8MQ03 144 aa13.34□□□□□ -0.27
YBX3-201ENST00000228251 ATP6V0E2Q8NHE4 81 aa13.34□□□□□ -0.27
YBX3-201ENST00000228251 K7ERU9 68 aa13.33□□□□□ -0.28
YBX3-201ENST00000228251 WFDC2Q14508 124 aa13.32□□□□□ -0.28
YBX3-201ENST00000228251 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
YBX3-201ENST00000228251 Q9H8V8 135 aa13.32□□□□□ -0.28
YBX3-201ENST00000228251 IFITM1P13164 125 aa13.32□□□□□ -0.28
YBX3-201ENST00000228251 IGHV3OR16-9A0A0B4J2B5 98 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 IGHV4-30-4P0DP06 118 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 MIFP14174 115 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 LYRM7Q5U5X0 104 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 CMYA5Q8N3K9 4069 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 DEFB4AO15263 64 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 PRSS2P07478 247 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
YBX3-201ENST00000228251 A0A1B0GUV1 79 aa13.29□□□□□ -0.28
YBX3-201ENST00000228251 G3V4G9 280 aa13.29□□□□□ -0.28
YBX3-201ENST00000228251 TCL1BO95988 128 aa13.29□□□□□ -0.28
YBX3-201ENST00000228251 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
YBX3-201ENST00000228251 SMCPP49901 116 aaPredicted RBP13.28□□□□□ -0.28
YBX3-201ENST00000228251 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
YBX3-201ENST00000228251 TRBV20-1A0A075B6N2 111 aa13.27□□□□□ -0.28
YBX3-201ENST00000228251 PAX4O43316 350 aa13.27□□□□□ -0.28
YBX3-201ENST00000228251 TEX48A0A1B0GUV7 120 aa13.27□□□□□ -0.29
YBX3-201ENST00000228251 KRTAP24-1Q3LI83 254 aa13.27□□□□□ -0.29
YBX3-201ENST00000228251 PSMB2P49721 201 aa13.26□□□□□ -0.29
YBX3-201ENST00000228251 HERV-K104P63124 156 aa13.26□□□□□ -0.29
YBX3-201ENST00000228251 DAND5Q8N907 189 aa13.26□□□□□ -0.29
YBX3-201ENST00000228251 PPDPFQ9H3Y8 114 aa13.26□□□□□ -0.29
YBX3-201ENST00000228251 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 CIRBPQ14011 172 aaKnown RBP13.25□□□□□ -0.29
YBX3-201ENST00000228251 MTURNQ8N3F0 131 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 CBY1Q9Y3M2 126 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 A0A087WZ39 114 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 DAD1P61803 113 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 PRIMA1Q86XR5 153 aa13.25□□□□□ -0.29
YBX3-201ENST00000228251 TRBV30A0A0K0K1B3 111 aa13.24□□□□□ -0.29
YBX3-201ENST00000228251 NPC2P61916 151 aa13.24□□□□□ -0.29
YBX3-201ENST00000228251 RNF151Q2KHN1 245 aa13.24□□□□□ -0.29
YBX3-201ENST00000228251 SOSTDC1Q6X4U4 206 aa13.24□□□□□ -0.29
YBX3-201ENST00000228251 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 ATP5G1P05496 136 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 ETDBQ3ZM63 59 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 SHISA2Q6UWI4 295 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 SH2D6Q7Z4S9 175 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 COX7B2Q8TF08 81 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 KRTAP10-11P60412 298 aa13.22□□□□□ -0.29
YBX3-201ENST00000228251 DNAH3Q8TD57 4116 aa13.21□□□□□ -0.29
YBX3-201ENST00000228251 A0A096LPF7 62 aa13.21□□□□□ -0.29
YBX3-201ENST00000228251 IGKV3OR2-268A0A0C4DH90 116 aa13.21□□□□□ -0.29
YBX3-201ENST00000228251 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.29
YBX3-201ENST00000228251 EGFEM1PQ0D2K5 195 aa13.21□□□□□ -0.29
YBX3-201ENST00000228251 FBN1P35555 2871 aaKnown RBP13.2□□□□□ -0.3
YBX3-201ENST00000228251 TRIAP1O43715 76 aa13.2□□□□□ -0.3
YBX3-201ENST00000228251 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
YBX3-201ENST00000228251 H7C2G1 150 aa13.2□□□□□ -0.3
YBX3-201ENST00000228251 SCGB1C2P0DMR2 95 aa13.18□□□□□ -0.3
YBX3-201ENST00000228251 ICOSQ9Y6W8 199 aa13.18□□□□□ -0.3
YBX3-201ENST00000228251 TMEM262E9PQX1 116 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 VPS25Q9BRG1 176 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 MEIG1Q5JSS6 88 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 LINC01561Q8N1V8 128 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
YBX3-201ENST00000228251 A0A0U1RRA0 63 aa13.16□□□□□ -0.3
YBX3-201ENST00000228251 M0QXV9 152 aa13.16□□□□□ -0.3
YBX3-201ENST00000228251 Q1RN00 199 aa13.16□□□□□ -0.3
YBX3-201ENST00000228251 PKD1L1Q8TDX9 2849 aa13.16□□□□□ -0.3
YBX3-201ENST00000228251 RPL13AP40429 203 aaKnown RBP13.15□□□□□ -0.3
YBX3-201ENST00000228251 STAB1Q9NY15 2570 aa13.15□□□□□ -0.31
YBX3-201ENST00000228251 SS18Q15532 418 aa13.15□□□□□ -0.31
YBX3-201ENST00000228251 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
YBX3-201ENST00000228251 Q8N3U1 123 aa13.14□□□□□ -0.31
YBX3-201ENST00000228251 TOMM7Q9P0U1 55 aa13.13□□□□□ -0.31
YBX3-201ENST00000228251 ATXN8Q156A1 80 aa13.12□□□□□ -0.31
YBX3-201ENST00000228251 ANK2Q01484 3957 aa13.12□□□□□ -0.31
YBX3-201ENST00000228251 MAST4O15021 2626 aa13.12□□□□□ -0.31
YBX3-201ENST00000228251 XCL1P47992 114 aa13.12□□□□□ -0.31
YBX3-201ENST00000228251 IBA57-AS1B1ANH7 110 aa13.11□□□□□ -0.31
YBX3-201ENST00000228251 LINC01620Q4KN68 170 aa13.11□□□□□ -0.31
YBX3-201ENST00000228251 LELP1Q5T871 98 aa13.11□□□□□ -0.31
YBX3-201ENST00000228251 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
YBX3-201ENST00000228251 TEN1Q86WV5 123 aa13.11□□□□□ -0.31
YBX3-201ENST00000228251 LINC00269Q8N2A0 174 aa13.11□□□□□ -0.31
YBX3-201ENST00000228251 FOXI1Q12951 378 aa13.1□□□□□ -0.31
YBX3-201ENST00000228251 MIR7-3HGQ8N6C7 128 aa13.1□□□□□ -0.31
YBX3-201ENST00000228251 SLC25A20O43772 301 aa13.09□□□□□ -0.31
YBX3-201ENST00000228251 Q8IZM0 81 aa13.09□□□□□ -0.31
YBX3-201ENST00000228251 C9JAW5 83 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms