RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 COX7A2LO14548 114 aa12.49□□□□□ -0.41
PRPF19-201ENST00000227524 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
PRPF19-201ENST00000227524 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
PRPF19-201ENST00000227524 SETD2Q9BYW2 2564 aaPredicted RBP12.48□□□□□ -0.41
PRPF19-201ENST00000227524 CSDC2Q9Y534 153 aaKnown RBP12.48□□□□□ -0.41
PRPF19-201ENST00000227524 TRAV13-1A0A0B4J241 112 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 CCDC179H3BU77 68 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 GAGE7O76087 117 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 GAGE4Q13068 117 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 NTM-AS1Q6ZSK4 140 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 C1orf158Q8N1D5 194 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 K7EQD1 137 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 RPL36AP83881 106 aaKnown RBP12.47□□□□□ -0.41
PRPF19-201ENST00000227524 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 HIST2H2BDQ6DRA6 164 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 RPL36ALQ969Q0 106 aaKnown RBP12.47□□□□□ -0.41
PRPF19-201ENST00000227524 SMR3AQ99954 134 aa12.47□□□□□ -0.41
PRPF19-201ENST00000227524 MEIG1Q5JSS6 88 aa12.46□□□□□ -0.41
PRPF19-201ENST00000227524 F5H768 121 aa12.46□□□□□ -0.42
PRPF19-201ENST00000227524 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
PRPF19-201ENST00000227524 HIVEP2P31629 2446 aa12.45□□□□□ -0.42
PRPF19-201ENST00000227524 DAZ2Q13117 558 aaKnown RBP12.45□□□□□ -0.42
PRPF19-201ENST00000227524 DAZ4Q86SG3 579 aaKnown RBP12.45□□□□□ -0.42
PRPF19-201ENST00000227524 STHQ8IWL8 128 aa12.45□□□□□ -0.42
PRPF19-201ENST00000227524 DAZ3Q9NR90 486 aaKnown RBP12.45□□□□□ -0.42
PRPF19-201ENST00000227524 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
PRPF19-201ENST00000227524 TRBV7-7A0A0K0K1E9 115 aa12.43□□□□□ -0.42
PRPF19-201ENST00000227524 HERV-K104P63124 156 aa12.43□□□□□ -0.42
PRPF19-201ENST00000227524 Q6ZTI0 123 aa12.43□□□□□ -0.42
PRPF19-201ENST00000227524 MAST4O15021 2626 aa12.43□□□□□ -0.42
PRPF19-201ENST00000227524 SVIPQ8NHG7 77 aa12.42□□□□□ -0.42
PRPF19-201ENST00000227524 TRACP01848 142 aa12.41□□□□□ -0.42
PRPF19-201ENST00000227524 ACYP1P07311 99 aa12.41□□□□□ -0.42
PRPF19-201ENST00000227524 RNASE1P07998 156 aaKnown RBP12.4□□□□□ -0.42
PRPF19-201ENST00000227524 PPDPFQ9H3Y8 114 aa12.4□□□□□ -0.42
PRPF19-201ENST00000227524 TRAV25A0A0B4J276 109 aa12.4□□□□□ -0.42
PRPF19-201ENST00000227524 FAM218AQ96MZ4 157 aa12.38□□□□□ -0.43
PRPF19-201ENST00000227524 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
PRPF19-201ENST00000227524 NSD1Q96L73 2696 aaPredicted RBP12.38□□□□□ -0.43
PRPF19-201ENST00000227524 UBE2L6O14933 153 aa12.37□□□□□ -0.43
PRPF19-201ENST00000227524 LY6G6DO95868 133 aa12.37□□□□□ -0.43
PRPF19-201ENST00000227524 BAALC-AS2P0C853 105 aa12.37□□□□□ -0.43
PRPF19-201ENST00000227524 LINC01006Q8NI28 216 aa12.37□□□□□ -0.43
PRPF19-201ENST00000227524 C22orf24Q9Y442 160 aa12.37□□□□□ -0.43
PRPF19-201ENST00000227524 HIVEP1P15822 2718 aa12.37□□□□□ -0.43
PRPF19-201ENST00000227524 HILS1P60008 231 aa12.36□□□□□ -0.43
PRPF19-201ENST00000227524 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
PRPF19-201ENST00000227524 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
PRPF19-201ENST00000227524 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
PRPF19-201ENST00000227524 C11orf44Q8N8P7 122 aa12.36□□□□□ -0.43
PRPF19-201ENST00000227524 WNK1Q9H4A3 2382 aa12.36□□□□□ -0.43
PRPF19-201ENST00000227524 C16orf95Q9H693 158 aa12.35□□□□□ -0.43
PRPF19-201ENST00000227524 NIPBLQ6KC79 2804 aaeCLIP12.35□□□□□ -0.43
PRPF19-201ENST00000227524 FAM222AQ5U5X8 452 aa12.35□□□□□ -0.43
PRPF19-201ENST00000227524 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
PRPF19-201ENST00000227524 PF4P02776 101 aa12.34□□□□□ -0.43
PRPF19-201ENST00000227524 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
PRPF19-201ENST00000227524 IMUPQ9GZP8 106 aa12.34□□□□□ -0.43
PRPF19-201ENST00000227524 A0A1W2PRX2 142 aa12.33□□□□□ -0.44
PRPF19-201ENST00000227524 CRPP02741 224 aa12.33□□□□□ -0.44
PRPF19-201ENST00000227524 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.44
PRPF19-201ENST00000227524 LOC100131303A0A0U1RQF7 123 aa12.33□□□□□ -0.44
PRPF19-201ENST00000227524 LINC00643Q86TS7 51 aa12.32□□□□□ -0.44
PRPF19-201ENST00000227524 MIR7-3HGQ8N6C7 128 aa12.32□□□□□ -0.44
PRPF19-201ENST00000227524 LINC00337Q8N6G1 96 aa12.32□□□□□ -0.44
PRPF19-201ENST00000227524 FN1P02751 2386 aaKnown RBP12.31□□□□□ -0.44
PRPF19-201ENST00000227524 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
PRPF19-201ENST00000227524 FAM236AA0A1B0GUQ0 79 aa12.31□□□□□ -0.44
PRPF19-201ENST00000227524 FAM236BA0A1B0GV22 79 aa12.31□□□□□ -0.44
PRPF19-201ENST00000227524 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
PRPF19-201ENST00000227524 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
PRPF19-201ENST00000227524 SDIM1Q6ZPB5 146 aa12.31□□□□□ -0.44
PRPF19-201ENST00000227524 CCL24O00175 119 aa12.3□□□□□ -0.44
PRPF19-201ENST00000227524 GIG44P09565 113 aaPredicted RBP12.3□□□□□ -0.44
PRPF19-201ENST00000227524 Q9HAA7 133 aa12.3□□□□□ -0.44
PRPF19-201ENST00000227524 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
PRPF19-201ENST00000227524 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
PRPF19-201ENST00000227524 TOMM7Q9P0U1 55 aa12.3□□□□□ -0.44
PRPF19-201ENST00000227524 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
PRPF19-201ENST00000227524 MALP21145 153 aa12.29□□□□□ -0.44
PRPF19-201ENST00000227524 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
PRPF19-201ENST00000227524 INAFM2P0DMQ5 153 aa12.29□□□□□ -0.44
PRPF19-201ENST00000227524 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
PRPF19-201ENST00000227524 C2CD3Q4AC94 2353 aa12.27□□□□□ -0.45
PRPF19-201ENST00000227524 INAFM1C9JVW0 142 aa12.27□□□□□ -0.45
PRPF19-201ENST00000227524 IGLV4-60A0A075B6I1 120 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 LINC00158P58513 81 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 SMIM11BQ8TCY0 68 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 OVOL2Q9BRP0 275 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 TRGV4A0A0C4DH28 118 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 GAGE2AQ6NT46 116 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 WFDC10AQ9H1F0 79 aa12.26□□□□□ -0.45
PRPF19-201ENST00000227524 A0A087WYN8 130 aa12.25□□□□□ -0.45
PRPF19-201ENST00000227524 CCL18P55774 89 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 2601 ms