RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 C5orf38Q86SI9 138 aa12.97□□□□□ -0.33
HOXA6-201ENST00000222728 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
HOXA6-201ENST00000222728 C16orf90A8MZG2 172 aa12.96□□□□□ -0.33
HOXA6-201ENST00000222728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.96□□□□□ -0.33
HOXA6-201ENST00000222728 COX6A2Q02221 97 aa12.96□□□□□ -0.33
HOXA6-201ENST00000222728 C14orf177Q52M58 125 aa12.96□□□□□ -0.33
HOXA6-201ENST00000222728 LINC00242Q5T6M2 205 aa12.96□□□□□ -0.33
HOXA6-201ENST00000222728 HIGD2BQ4VC39 106 aa12.95□□□□□ -0.34
HOXA6-201ENST00000222728 PGPEP1Q9NXJ5 209 aa12.95□□□□□ -0.34
HOXA6-201ENST00000222728 IGLV5-52A0A0A0MRZ9 124 aa12.94□□□□□ -0.34
HOXA6-201ENST00000222728 hDV102S1A0JD36 115 aa12.94□□□□□ -0.34
HOXA6-201ENST00000222728 COX7A2LO14548 114 aa12.94□□□□□ -0.34
HOXA6-201ENST00000222728 NDUFA6P56556 154 aa12.93□□□□□ -0.34
HOXA6-201ENST00000222728 NTN5Q8WTR8 489 aaPredicted RBP12.93□□□□□ -0.34
HOXA6-201ENST00000222728 CST9LQ9H4G1 147 aa12.93□□□□□ -0.34
HOXA6-201ENST00000222728 IGHV3OR16-9A0A0B4J2B5 98 aa12.92□□□□□ -0.34
HOXA6-201ENST00000222728 ATP5LO75964 103 aa12.92□□□□□ -0.34
HOXA6-201ENST00000222728 MALP21145 153 aa12.92□□□□□ -0.34
HOXA6-201ENST00000222728 PMVKQ15126 192 aa12.92□□□□□ -0.34
HOXA6-201ENST00000222728 CDPF1Q6NVV7 123 aa12.92□□□□□ -0.34
HOXA6-201ENST00000222728 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
HOXA6-201ENST00000222728 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
HOXA6-201ENST00000222728 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
HOXA6-201ENST00000222728 LINC01620Q4KN68 170 aa12.9□□□□□ -0.34
HOXA6-201ENST00000222728 LINC00526Q96FQ7 95 aa12.9□□□□□ -0.34
HOXA6-201ENST00000222728 LRP1BQ9NZR2 4599 aa12.9□□□□□ -0.34
HOXA6-201ENST00000222728 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
HOXA6-201ENST00000222728 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
HOXA6-201ENST00000222728 BIRC6Q9NR09 4857 aa12.88□□□□□ -0.35
HOXA6-201ENST00000222728 GVQW2A0A096LPI5 108 aaPredicted RBP12.88□□□□□ -0.35
HOXA6-201ENST00000222728 GEMIN7Q9H840 131 aaKnown RBP12.88□□□□□ -0.35
HOXA6-201ENST00000222728 SLPIP03973 132 aa12.87□□□□□ -0.35
HOXA6-201ENST00000222728 FABP4P15090 132 aa12.87□□□□□ -0.35
HOXA6-201ENST00000222728 GCSHP23434 173 aa12.87□□□□□ -0.35
HOXA6-201ENST00000222728 KRTAP10-1P60331 282 aa12.87□□□□□ -0.35
HOXA6-201ENST00000222728 A0A087WZ39 114 aa12.86□□□□□ -0.35
HOXA6-201ENST00000222728 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
HOXA6-201ENST00000222728 HERVK_113P63121 156 aa12.86□□□□□ -0.35
HOXA6-201ENST00000222728 CDKN2A-AS1Q9UH64 79 aa12.86□□□□□ -0.35
HOXA6-201ENST00000222728 TINCRA0A1B0GVN0 87 aa12.85□□□□□ -0.35
HOXA6-201ENST00000222728 APOMO95445 188 aa12.85□□□□□ -0.35
HOXA6-201ENST00000222728 SEC11AP67812 179 aa12.85□□□□□ -0.35
HOXA6-201ENST00000222728 ORAOV1Q8WV07 137 aa12.85□□□□□ -0.35
HOXA6-201ENST00000222728 IGHV3-64A0A075B6Q5 118 aa12.84□□□□□ -0.35
HOXA6-201ENST00000222728 ZNF561-AS1K7EIQ3 104 aa12.84□□□□□ -0.35
HOXA6-201ENST00000222728 LINC00469Q8N7U9 141 aa12.84□□□□□ -0.35
HOXA6-201ENST00000222728 IGLV4-69A0A075B6H9 119 aa12.83□□□□□ -0.36
HOXA6-201ENST00000222728 H0Y8G0 127 aa12.83□□□□□ -0.36
HOXA6-201ENST00000222728 CNBPP62633 177 aaKnown RBP12.83□□□□□ -0.36
HOXA6-201ENST00000222728 SPAG11BQ08648 103 aa12.83□□□□□ -0.36
HOXA6-201ENST00000222728 CHAC1Q9BUX1 264 aa12.83□□□□□ -0.36
HOXA6-201ENST00000222728 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
HOXA6-201ENST00000222728 COA6Q5JTJ3 125 aaKnown RBP12.82□□□□□ -0.36
HOXA6-201ENST00000222728 HSPB8Q9UJY1 196 aa12.82□□□□□ -0.36
HOXA6-201ENST00000222728 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
HOXA6-201ENST00000222728 CHTOPQ9Y3Y2 248 aaKnown RBP12.81□□□□□ -0.36
HOXA6-201ENST00000222728 DNAH8Q96JB1 4490 aa12.81□□□□□ -0.36
HOXA6-201ENST00000222728 IGLV5-45A0A087WSX0 123 aa12.8□□□□□ -0.36
HOXA6-201ENST00000222728 TRAV12-1A0A0B4J245 112 aa12.8□□□□□ -0.36
HOXA6-201ENST00000222728 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
HOXA6-201ENST00000222728 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
HOXA6-201ENST00000222728 LINC01561Q8N1V8 128 aa12.79□□□□□ -0.36
HOXA6-201ENST00000222728 C9orf163Q8N9P6 203 aa12.79□□□□□ -0.36
HOXA6-201ENST00000222728 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
HOXA6-201ENST00000222728 SPINK8P0C7L1 97 aa12.78□□□□□ -0.36
HOXA6-201ENST00000222728 SYCNQ0VAF6 134 aa12.78□□□□□ -0.36
HOXA6-201ENST00000222728 CARD19Q96LW7 228 aa12.78□□□□□ -0.36
HOXA6-201ENST00000222728 MRPL35Q9NZE8 188 aaKnown RBP12.78□□□□□ -0.36
HOXA6-201ENST00000222728 ZNF22P17026 224 aaPredicted RBP12.77□□□□□ -0.37
HOXA6-201ENST00000222728 Q6ZRU5 148 aa12.77□□□□□ -0.37
HOXA6-201ENST00000222728 CAMK2N2Q96S95 79 aa12.77□□□□□ -0.37
HOXA6-201ENST00000222728 TOMM7Q9P0U1 55 aa12.77□□□□□ -0.37
HOXA6-201ENST00000222728 APOBP04114 4563 aaKnown RBP12.77□□□□□ -0.37
HOXA6-201ENST00000222728 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
HOXA6-201ENST00000222728 KIAA0087Q14695 138 aa12.76□□□□□ -0.37
HOXA6-201ENST00000222728 ODF1Q14990 250 aa12.76□□□□□ -0.37
HOXA6-201ENST00000222728 C2orf48Q96LS8 159 aa12.76□□□□□ -0.37
HOXA6-201ENST00000222728 FAM30AQ9NZY2 134 aa12.76□□□□□ -0.37
HOXA6-201ENST00000222728 F8VRH5 84 aa12.75□□□□□ -0.37
HOXA6-201ENST00000222728 HAMPP81172 84 aa12.75□□□□□ -0.37
HOXA6-201ENST00000222728 H3BRM9 83 aa12.74□□□□□ -0.37
HOXA6-201ENST00000222728 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
HOXA6-201ENST00000222728 PMCHL2Q9BQD1 86 aa12.74□□□□□ -0.37
HOXA6-201ENST00000222728 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
HOXA6-201ENST00000222728 PRSS2P07478 247 aa12.73□□□□□ -0.37
HOXA6-201ENST00000222728 C10orf25Q5T742 122 aa12.73□□□□□ -0.37
HOXA6-201ENST00000222728 C2orf82Q6UX34 121 aa12.73□□□□□ -0.37
HOXA6-201ENST00000222728 UNQ6190/PRO20217Q6UXQ8 127 aa12.73□□□□□ -0.37
HOXA6-201ENST00000222728 SDIM1Q6ZPB5 146 aa12.73□□□□□ -0.37
HOXA6-201ENST00000222728 NDUFA1O15239 70 aa12.72□□□□□ -0.37
HOXA6-201ENST00000222728 KIAA1109Q2LD37 5005 aa12.71□□□□□ -0.37
HOXA6-201ENST00000222728 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
HOXA6-201ENST00000222728 Q8IZM0 81 aa12.71□□□□□ -0.37
HOXA6-201ENST00000222728 S100A6P06703 90 aa12.7□□□□□ -0.38
HOXA6-201ENST00000222728 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
HOXA6-201ENST00000222728 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
HOXA6-201ENST00000222728 CHTF8P0CG12 524 aa12.69□□□□□ -0.38
HOXA6-201ENST00000222728 Q6ZSA8 131 aa12.69□□□□□ -0.38
HOXA6-201ENST00000222728 C6orf48Q9UBA6 75 aa12.69□□□□□ -0.38
HOXA6-201ENST00000222728 F8WDY8 70 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms