RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 Q8N814 137 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 TRBV6-8A0A0A6YYG3 113 aa7.65□□□□□ -1.19
VCL-201ENST00000211998 LY6LH3BQJ8 138 aa7.65□□□□□ -1.19
VCL-201ENST00000211998 ZFHX2Q9C0A1 2572 aaPredicted RBP7.64□□□□□ -1.19
VCL-201ENST00000211998 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
VCL-201ENST00000211998 C11orf71Q6IPW1 123 aa7.64□□□□□ -1.19
VCL-201ENST00000211998 LINC00208Q96KT6 92 aa7.63□□□□□ -1.19
VCL-201ENST00000211998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.63□□□□□ -1.19
VCL-201ENST00000211998 PRO3102Q9H379 93 aa7.63□□□□□ -1.19
VCL-201ENST00000211998 IGLV2-18A0A075B6J9 118 aa7.62□□□□□ -1.19
VCL-201ENST00000211998 DEFB131BA0A096LNP1 70 aa7.62□□□□□ -1.19
VCL-201ENST00000211998 HCFC1P51610 2035 aa7.62□□□□□ -1.19
VCL-201ENST00000211998 TRBV6-4A0A1B0GX49 114 aa7.61□□□□□ -1.19
VCL-201ENST00000211998 BEAN1Q3B7T3 259 aa7.61□□□□□ -1.19
VCL-201ENST00000211998 LINC00242Q5T6M2 205 aa7.61□□□□□ -1.19
VCL-201ENST00000211998 ZNF843Q8N446 348 aa7.61□□□□□ -1.19
VCL-201ENST00000211998 KLLNB2CW77 178 aa7.61□□□□□ -1.19
VCL-201ENST00000211998 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
VCL-201ENST00000211998 PSMG3-AS1Q96PY0 264 aa7.61□□□□□ -1.19
VCL-201ENST00000211998 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
VCL-201ENST00000211998 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
VCL-201ENST00000211998 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
VCL-201ENST00000211998 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
VCL-201ENST00000211998 ARHGAP32A7KAX9 2087 aa7.6□□□□□ -1.19
VCL-201ENST00000211998 IGKV2-24A0A0C4DH68 120 aa7.6□□□□□ -1.19
VCL-201ENST00000211998 KIAA1549LQ6ZVL6 1849 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 Q8N6K4 173 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 M0R378 163 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 TTC28Q96AY4 2481 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 EP400Q96L91 3159 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 HIVEP2P31629 2446 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 COX6A2Q02221 97 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 Q6ZVQ6 151 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
VCL-201ENST00000211998 PTPRQQ9UMZ3 2332 aa7.59□□□□□ -1.2
VCL-201ENST00000211998 LINC01547P58512 204 aaPredicted RBP7.58□□□□□ -1.2
VCL-201ENST00000211998 IGHV4-30-4P0DP06 118 aa7.58□□□□□ -1.2
VCL-201ENST00000211998 COX17Q14061 63 aa7.58□□□□□ -1.2
VCL-201ENST00000211998 CD164L2Q6UWJ8 174 aa7.58□□□□□ -1.2
VCL-201ENST00000211998 DHRS4-AS1Q9P1J3 65 aa7.58□□□□□ -1.2
VCL-201ENST00000211998 TRAV10A0A0B4J240 114 aa7.57□□□□□ -1.2
VCL-201ENST00000211998 PRM2P04554 102 aa7.57□□□□□ -1.2
VCL-201ENST00000211998 ZNF702PQ9H963 129 aa7.57□□□□□ -1.2
VCL-201ENST00000211998 PRR3P79522 188 aaKnown RBP7.57□□□□□ -1.2
VCL-201ENST00000211998 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
VCL-201ENST00000211998 ANKHD1Q8IWZ3 2542 aaKnown RBP7.56□□□□□ -1.2
VCL-201ENST00000211998 A0A087WZ39 114 aa7.56□□□□□ -1.2
VCL-201ENST00000211998 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
VCL-201ENST00000211998 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
VCL-201ENST00000211998 Q8IZM0 81 aa7.56□□□□□ -1.2
VCL-201ENST00000211998 AMELXQ99217 191 aa7.56□□□□□ -1.2
VCL-201ENST00000211998 COL4A4P53420 1690 aaPredicted RBP7.56□□□□□ -1.2
VCL-201ENST00000211998 SBSPONQ8IVN8 264 aa7.55□□□□□ -1.2
VCL-201ENST00000211998 EML5Q05BV3 1969 aa7.55□□□□□ -1.2
VCL-201ENST00000211998 CHCHD7Q9BUK0 85 aa7.55□□□□□ -1.2
VCL-201ENST00000211998 PLAC8L1A1L4L8 177 aa7.55□□□□□ -1.2
VCL-201ENST00000211998 LY6G6DO95868 133 aa7.55□□□□□ -1.2
VCL-201ENST00000211998 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
VCL-201ENST00000211998 LINC00575Q6W349 94 aa7.54□□□□□ -1.2
VCL-201ENST00000211998 COX8CQ7Z4L0 72 aa7.54□□□□□ -1.2
VCL-201ENST00000211998 ACACBO00763 2458 aa7.54□□□□□ -1.2
VCL-201ENST00000211998 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
VCL-201ENST00000211998 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
VCL-201ENST00000211998 ATG2AQ2TAZ0 1938 aa7.53□□□□□ -1.2
VCL-201ENST00000211998 PRR14LQ5THK1 2151 aa7.53□□□□□ -1.2
VCL-201ENST00000211998 LINC01006Q8NI28 216 aa7.53□□□□□ -1.2
VCL-201ENST00000211998 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
VCL-201ENST00000211998 LIMD2Q9BT23 127 aa7.53□□□□□ -1.2
VCL-201ENST00000211998 NUP210LQ5VU65 1888 aa7.52□□□□□ -1.21
VCL-201ENST00000211998 CXCL6P80162 114 aa7.52□□□□□ -1.21
VCL-201ENST00000211998 BDP1A6H8Y1 2624 aa7.52□□□□□ -1.21
VCL-201ENST00000211998 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
VCL-201ENST00000211998 C7orf33Q8WU49 177 aa7.52□□□□□ -1.21
VCL-201ENST00000211998 RPL37AP8A6NKH3 93 aa7.51□□□□□ -1.21
VCL-201ENST00000211998 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
VCL-201ENST00000211998 C1orf137Q5JT78 98 aa7.51□□□□□ -1.21
VCL-201ENST00000211998 C10orf99Q6UWK7 81 aa7.51□□□□□ -1.21
VCL-201ENST00000211998 LINC01546A6NGU7 62 aa7.51□□□□□ -1.21
VCL-201ENST00000211998 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
VCL-201ENST00000211998 LELP1Q5T871 98 aa7.51□□□□□ -1.21
VCL-201ENST00000211998 BBC3Q96PG8 261 aaPredicted RBP7.51□□□□□ -1.21
VCL-201ENST00000211998 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 VPREB1P12018 145 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 MRGPRG-AS1Q2M3A8 158 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 CYSRT1A8MQ03 144 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 H0Y9P7 68 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.5□□□□□ -1.21
VCL-201ENST00000211998 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
VCL-201ENST00000211998 AGRNO00468 2067 aa7.5□□□□□ -1.21
VCL-201ENST00000211998 BCE1O60756 84 aa7.49□□□□□ -1.21
VCL-201ENST00000211998 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
VCL-201ENST00000211998 Q9UF83 564 aa7.49□□□□□ -1.21
VCL-201ENST00000211998 UNQ6190/PRO20217Q6UXQ8 127 aa7.49□□□□□ -1.21
VCL-201ENST00000211998 NHLRC4P0CG21 123 aaPredicted RBP7.49□□□□□ -1.21
VCL-201ENST00000211998 SORL1Q92673 2214 aa7.48□□□□□ -1.21
VCL-201ENST00000211998 KPRPQ5T749 579 aaPredicted RBP7.48□□□□□ -1.21
VCL-201ENST00000211998 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
VCL-201ENST00000211998 DSCAMO60469 2012 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms