RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 A0A096LPF7 62 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 PAX4O43316 350 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
CTDP1-201ENST00000075430 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 A0A087WVE0 104 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 TIRAPP58753 221 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 PYGO1Q9Y3Y4 419 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
CTDP1-201ENST00000075430 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
CTDP1-201ENST00000075430 COX7A2LO14548 114 aa12.04□□□□□ -0.48
CTDP1-201ENST00000075430 CRPP02741 224 aa12.04□□□□□ -0.48
CTDP1-201ENST00000075430 BBC3Q96PG8 261 aaPredicted RBP12.04□□□□□ -0.48
CTDP1-201ENST00000075430 HECTD1Q9ULT8 2610 aa12.04□□□□□ -0.48
CTDP1-201ENST00000075430 STHQ8IWL8 128 aa12.04□□□□□ -0.48
CTDP1-201ENST00000075430 HIST1H4AP62805 103 aaKnown RBP12.03□□□□□ -0.48
CTDP1-201ENST00000075430 C9orf129Q5T035 196 aaKnown RBP12.03□□□□□ -0.48
CTDP1-201ENST00000075430 RPL36AP83881 106 aaKnown RBP12.03□□□□□ -0.48
CTDP1-201ENST00000075430 RPL36ALQ969Q0 106 aaKnown RBP12.03□□□□□ -0.48
CTDP1-201ENST00000075430 NDUFA1O15239 70 aa12.02□□□□□ -0.49
CTDP1-201ENST00000075430 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
CTDP1-201ENST00000075430 DSCR9P59020 149 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 HERVK_113P63121 156 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 MAP6D1Q9H9H5 199 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 NCR3O14931 201 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 INSP01308 110 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 WFDC9Q8NEX5 89 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
CTDP1-201ENST00000075430 LECT2O14960 151 aa12□□□□□ -0.49
CTDP1-201ENST00000075430 A0A087WYN8 130 aa11.99□□□□□ -0.49
CTDP1-201ENST00000075430 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
CTDP1-201ENST00000075430 PRR3P79522 188 aaKnown RBP11.98□□□□□ -0.49
CTDP1-201ENST00000075430 CFAP161Q6P656 301 aa11.98□□□□□ -0.49
CTDP1-201ENST00000075430 DEFB130BP0DP73 79 aa11.98□□□□□ -0.49
CTDP1-201ENST00000075430 DEFB130AP0DP74 79 aa11.98□□□□□ -0.49
CTDP1-201ENST00000075430 Q6Q795 121 aa11.98□□□□□ -0.49
CTDP1-201ENST00000075430 IGHV4-31P0DP07 118 aa11.97□□□□□ -0.49
CTDP1-201ENST00000075430 LINC00337Q8N6G1 96 aa11.97□□□□□ -0.49
CTDP1-201ENST00000075430 ZNF702PQ9H963 129 aa11.97□□□□□ -0.49
CTDP1-201ENST00000075430 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
CTDP1-201ENST00000075430 ESM1Q9NQ30 184 aa11.96□□□□□ -0.5
CTDP1-201ENST00000075430 XCL1P47992 114 aa11.95□□□□□ -0.5
CTDP1-201ENST00000075430 A0A1B0GX51 115 aa11.95□□□□□ -0.5
CTDP1-201ENST00000075430 MALP21145 153 aa11.95□□□□□ -0.5
CTDP1-201ENST00000075430 M0QXV9 152 aa11.95□□□□□ -0.5
CTDP1-201ENST00000075430 HELZ2Q9BYK8 2649 aaKnown RBP11.95□□□□□ -0.5
CTDP1-201ENST00000075430 LINC00643Q86TS7 51 aa11.94□□□□□ -0.5
CTDP1-201ENST00000075430 TMEM89A2RUT3 159 aa11.94□□□□□ -0.5
CTDP1-201ENST00000075430 SMIM11BQ8TCY0 68 aa11.94□□□□□ -0.5
CTDP1-201ENST00000075430 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
CTDP1-201ENST00000075430 F8P00451 2351 aa11.93□□□□□ -0.5
CTDP1-201ENST00000075430 C6orf226Q5I0X4 101 aa11.93□□□□□ -0.5
CTDP1-201ENST00000075430 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
CTDP1-201ENST00000075430 PEMTQ9UBM1 199 aa11.93□□□□□ -0.5
CTDP1-201ENST00000075430 Q6YL49 198 aa11.93□□□□□ -0.5
CTDP1-201ENST00000075430 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
CTDP1-201ENST00000075430 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
CTDP1-201ENST00000075430 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
CTDP1-201ENST00000075430 FAM110AQ9BQ89 295 aa11.92□□□□□ -0.5
CTDP1-201ENST00000075430 ITPR2Q14571 2701 aa11.92□□□□□ -0.5
CTDP1-201ENST00000075430 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
CTDP1-201ENST00000075430 K7EQD1 137 aa11.92□□□□□ -0.5
CTDP1-201ENST00000075430 C3orf22Q8N5N4 141 aa11.91□□□□□ -0.5
CTDP1-201ENST00000075430 J3QLI3 93 aa11.91□□□□□ -0.5
CTDP1-201ENST00000075430 C1orf158Q8N1D5 194 aa11.91□□□□□ -0.5
CTDP1-201ENST00000075430 COX7B2Q8TF08 81 aa11.91□□□□□ -0.5
CTDP1-201ENST00000075430 BRI3O95415 125 aa11.9□□□□□ -0.5
CTDP1-201ENST00000075430 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
CTDP1-201ENST00000075430 ODF3L2Q3SX64 289 aa11.9□□□□□ -0.5
CTDP1-201ENST00000075430 CYSTM1Q9H1C7 97 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 TRBV7-7A0A0K0K1E9 115 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 FAM240AA0A1B0GVK7 77 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 CCL18P55774 89 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 ZNF843Q8N446 348 aa11.89□□□□□ -0.51
CTDP1-201ENST00000075430 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
CTDP1-201ENST00000075430 HILS1P60008 231 aa11.88□□□□□ -0.51
CTDP1-201ENST00000075430 KIR2DL5BQ8NHK3 375 aa11.88□□□□□ -0.51
CTDP1-201ENST00000075430 LINC00526Q96FQ7 95 aa11.87□□□□□ -0.51
CTDP1-201ENST00000075430 IGLV5-39A0A0G2JS06 123 aa11.87□□□□□ -0.51
CTDP1-201ENST00000075430 TIMM17BO60830 172 aa11.87□□□□□ -0.51
CTDP1-201ENST00000075430 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
CTDP1-201ENST00000075430 IGKV2-28A0A075B6P5 120 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 IGKV2D-28P01615 120 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 ACYP1P07311 99 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 TRAV23DV6A0A075B6W5 121 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 DEFB4AO15263 64 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 CXCL5P42830 114 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 DNAJC30Q96LL9 226 aa11.86□□□□□ -0.51
CTDP1-201ENST00000075430 TRACP01848 142 aa11.85□□□□□ -0.51
CTDP1-201ENST00000075430 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
CTDP1-201ENST00000075430 AKAP9Q99996 3911 aa11.85□□□□□ -0.51
CTDP1-201ENST00000075430 A8MTW9 85 aa11.85□□□□□ -0.51
CTDP1-201ENST00000075430 UQCRQO14949 82 aa11.85□□□□□ -0.51
CTDP1-201ENST00000075430 RNF152Q8N8N0 203 aa11.83□□□□□ -0.51
CTDP1-201ENST00000075430 C22orf24Q9Y442 160 aa11.83□□□□□ -0.51
CTDP1-201ENST00000075430 F5H768 121 aa11.83□□□□□ -0.52
CTDP1-201ENST00000075430 C9orf116Q5BN46 136 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms