RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 KMT2BQ9UMN6 2715 aaPredicted RBP8.77□□□□□ -1.01
CHPF2-201ENST00000035307 TSPEAR-AS2P59090 65 aa8.77□□□□□ -1.01
CHPF2-201ENST00000035307 LINC01620Q4KN68 170 aa8.77□□□□□ -1.01
CHPF2-201ENST00000035307 ICOSQ9Y6W8 199 aa8.77□□□□□ -1.01
CHPF2-201ENST00000035307 G3V4G9 280 aa8.77□□□□□ -1.01
CHPF2-201ENST00000035307 RETNQ9HD89 108 aa8.77□□□□□ -1.01
CHPF2-201ENST00000035307 Q6ZSN1 163 aa8.76□□□□□ -1.01
CHPF2-201ENST00000035307 FAM222AQ5U5X8 452 aa8.76□□□□□ -1.01
CHPF2-201ENST00000035307 KLK12Q9UKR0 248 aa8.76□□□□□ -1.01
CHPF2-201ENST00000035307 FSHBP01225 129 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 ATP5G1P05496 136 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 C9orf85Q96MD7 179 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 IGLV2-18A0A075B6J9 118 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 DAZ2Q13117 558 aaKnown RBP8.75□□□□□ -1.01
CHPF2-201ENST00000035307 DAZ4Q86SG3 579 aaKnown RBP8.75□□□□□ -1.01
CHPF2-201ENST00000035307 DAZ3Q9NR90 486 aaKnown RBP8.75□□□□□ -1.01
CHPF2-201ENST00000035307 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 KRTAP1-1Q07627 177 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
CHPF2-201ENST00000035307 FOXI1Q12951 378 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 TMEM223A0PJW6 202 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 APOC4P55056 127 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 DNAJC30Q96LL9 226 aa8.74□□□□□ -1.01
CHPF2-201ENST00000035307 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
CHPF2-201ENST00000035307 COX7B2Q8TF08 81 aa8.73□□□□□ -1.01
CHPF2-201ENST00000035307 RBMY1FQ15415 496 aaKnown RBP8.73□□□□□ -1.01
CHPF2-201ENST00000035307 UFSP1Q6NVU6 142 aa8.73□□□□□ -1.01
CHPF2-201ENST00000035307 TEX49A0A1B0GTD5 131 aa8.73□□□□□ -1.01
CHPF2-201ENST00000035307 SPATA3Q8NHX4 192 aa8.73□□□□□ -1.01
CHPF2-201ENST00000035307 IGKV2D-24A0A075B6R9 120 aa8.72□□□□□ -1.01
CHPF2-201ENST00000035307 RNF152Q8N8N0 203 aa8.72□□□□□ -1.01
CHPF2-201ENST00000035307 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
CHPF2-201ENST00000035307 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
CHPF2-201ENST00000035307 LINC00269Q8N2A0 174 aa8.72□□□□□ -1.01
CHPF2-201ENST00000035307 FBN1P35555 2871 aaKnown RBP8.72□□□□□ -1.01
CHPF2-201ENST00000035307 TENM1Q9UKZ4 2725 aa8.72□□□□□ -1.01
CHPF2-201ENST00000035307 ODF3Q96PU9 254 aa8.71□□□□□ -1.01
CHPF2-201ENST00000035307 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.02
CHPF2-201ENST00000035307 ZMAT4Q9H898 229 aa8.71□□□□□ -1.02
CHPF2-201ENST00000035307 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
CHPF2-201ENST00000035307 COX8CQ7Z4L0 72 aa8.71□□□□□ -1.02
CHPF2-201ENST00000035307 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.02
CHPF2-201ENST00000035307 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
CHPF2-201ENST00000035307 TRIAP1O43715 76 aa8.7□□□□□ -1.02
CHPF2-201ENST00000035307 NCR3O14931 201 aa8.7□□□□□ -1.02
CHPF2-201ENST00000035307 LECT2O14960 151 aa8.7□□□□□ -1.02
CHPF2-201ENST00000035307 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
CHPF2-201ENST00000035307 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
CHPF2-201ENST00000035307 BRI3O95415 125 aa8.69□□□□□ -1.02
CHPF2-201ENST00000035307 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
CHPF2-201ENST00000035307 MIAQ16674 131 aa8.69□□□□□ -1.02
CHPF2-201ENST00000035307 MT-ATP8P03928 68 aa8.69□□□□□ -1.02
CHPF2-201ENST00000035307 CRYBA4P53673 196 aa8.69□□□□□ -1.02
CHPF2-201ENST00000035307 C1orf158Q8N1D5 194 aa8.69□□□□□ -1.02
CHPF2-201ENST00000035307 SLPIP03973 132 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 UBE2D4Q9Y2X8 147 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 COX7A2LO14548 114 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 SPART-AS1P0CW21 52 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 HIGD2BQ4VC39 106 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 PRO0255Q9UI72 69 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 IGHV4-30-4P0DP06 118 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 KRTAP10-3P60369 221 aa8.68□□□□□ -1.02
CHPF2-201ENST00000035307 UBE2DNLQ8IWF7 75 aa8.67□□□□□ -1.02
CHPF2-201ENST00000035307 TRBV10-1A0A0K0K1A3 114 aa8.67□□□□□ -1.02
CHPF2-201ENST00000035307 HAMPP81172 84 aa8.67□□□□□ -1.02
CHPF2-201ENST00000035307 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
CHPF2-201ENST00000035307 COX6A2Q02221 97 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 IFITM1P13164 125 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 B5MCH6 92 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 PSCAO43653 123 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 VWFP04275 2813 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 PDZD2O15018 2839 aa8.66□□□□□ -1.02
CHPF2-201ENST00000035307 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.02
CHPF2-201ENST00000035307 Q8N2B8 174 aa8.65□□□□□ -1.02
CHPF2-201ENST00000035307 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
CHPF2-201ENST00000035307 LINC00315P59091 139 aa8.65□□□□□ -1.02
CHPF2-201ENST00000035307 MRPL23Q16540 153 aaKnown RBP8.65□□□□□ -1.02
CHPF2-201ENST00000035307 CYSRT1A8MQ03 144 aa8.65□□□□□ -1.03
CHPF2-201ENST00000035307 SVIPQ8NHG7 77 aa8.65□□□□□ -1.03
CHPF2-201ENST00000035307 XAGE1AQ9HD64 81 aa8.65□□□□□ -1.03
CHPF2-201ENST00000035307 SPAG11BQ08648 103 aa8.64□□□□□ -1.03
CHPF2-201ENST00000035307 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
CHPF2-201ENST00000035307 IGHV4-28A0A0C4DH34 117 aa8.64□□□□□ -1.03
CHPF2-201ENST00000035307 HERV-K104P63124 156 aa8.64□□□□□ -1.03
CHPF2-201ENST00000035307 CAMK2N2Q96S95 79 aa8.64□□□□□ -1.03
CHPF2-201ENST00000035307 LINC00242Q5T6M2 205 aa8.63□□□□□ -1.03
CHPF2-201ENST00000035307 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
CHPF2-201ENST00000035307 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
CHPF2-201ENST00000035307 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
CHPF2-201ENST00000035307 RPL18AQ02543 176 aaKnown RBP8.62□□□□□ -1.03
CHPF2-201ENST00000035307 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
CHPF2-201ENST00000035307 C14orf132Q9NPU4 83 aa8.62□□□□□ -1.03
CHPF2-201ENST00000035307 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
CHPF2-201ENST00000035307 UBE2D1P51668 147 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms