RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Sec11aQ9R0P6 179 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Igkv14-126A0A075B5K0 117 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gata2O09100 480 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 P01802 115 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Slc25a47Q6IS41 310 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Q8VC23 124 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tmem89Q9DA04 169 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 RttnQ8R4Y8 2226 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Znhit1Q8R331 154 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 V1ra8Q9EQ48 279 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Opn3Q9WUK7 400 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm45861A0A1B0GRY3 1923 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Ighv7-3A0A075B5R2 120 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Igkv13-85A0A075B666 115 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gng5Q80SZ7 68 aa13.05□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tmem241Q3UME2 297 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Siglec12Q91Y57 467 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Lypd8Q9D7S0 255 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Zfhx2Q2MHN3 2562 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Smr2O09133 150 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 P04219 140 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Dynlt3P56387 116 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Parm1Q923D3 296 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tex36Q9D5N9 219 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm17732E9Q5I2 61 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Mmp23O88676 391 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Srsf1Q6PDM2 248 aaKnown RBP13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Cox6b1P56391 86 aaKnown RBP13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Klf14Q19A41 325 aa13.04□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Igkv4-91A0A075B5L2 119 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm15080A2BI02 449 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Umad1E0CX23 159 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 SnrpcQ62241 159 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 EpopQ7TNS8 369 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 LbhQ9CX60 105 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Igh-VJ558P01758 117 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Olfr33Q8VGX7 318 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Dkk2Q9QYZ8 259 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm45871A0A1B0GRI9 540 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 LtbP41155 306 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Prima1Q810F0 153 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tmem91Q8C581 172 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Phlda3Q9WV95 125 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Rnase2aQ8K196 155 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 OtofQ9ESF1 1997 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Dock11A2AF47 2073 aa13.03□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Wdr86D3Z757 380 aa13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Tm4sf19E9Q9H8 206 aa13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Gm12888Q3UW77 119 aa13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 GrhprQ91Z53 328 aa13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 LenepQ9WVB6 61 aa13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Klrd1O54707 179 aa13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Sumo2P61957 95 aaKnown RBP13.02□□□□□ -0.32
Clcn3-203ENSMUST00000093490 Trav7-5A0A0G2JFX6 112 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gm45785A0A1B0GT05 94 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Tmem136Q3TYE7 245 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Crim1Q9JLL0 1037 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Saxo2Q8BQB6 394 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Zg16Q8K0C5 167 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Vmn1r216Q8R257 298 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gpr179E9PY61 2293 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Lgals6O54891 301 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 SeleQ00690 612 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 BC106179Q8C9L1 186 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gm4894Q8CA09 118 aa13.02□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Ighv1-34A0A075B5V2 117 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Olfr484Q8VFD3 321 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Ighv7-2A0A0A6YX91 119 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Zfp11P10751 647 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Spsb3Q571F5 354 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Mzt1Q8BUR9 78 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Ighv5-9A0A075B5Q2 117 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Zfp950A0A0U1RQ46 609 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Edn3P48299 214 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gpx7Q99LJ6 186 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gm5819E9PZ96 154 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Cox6a1P43024 111 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Ormdl2Q9CQZ0 153 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 4930544G11RikQ9CR99 193 aa13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Ndufa7Q9Z1P6 113 aaKnown RBP13.01□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gm29644A0A087WPG2 191 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 ApohQ01339 345 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Olfr810Q8VFH9 312 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Il2raP01590 268 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Shisal1Q0VBP7 198 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Hspe1Q64433 102 aaKnown RBP13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Dock8Q8C147 2100 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Dazap2Q9DCP9 168 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Cabin1G3X8Q1 2187 aaKnown RBP13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Iglc2P01844 104 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 C1qtnf5Q8K479 243 aa13□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Gm1553Q66VB7 94 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 A730015C16RikQ8C992 119 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Ssbp1Q9CYR0 152 aaKnown RBP12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 P01680 129 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 BC049762Q8C601 163 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Pi4kaE9Q3L2 2105 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Trbv19A0A0B4J1H4 117 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 Esp24A8R0V6 68 aa12.99□□□□□ -0.33
Clcn3-203ENSMUST00000093490 QrfpQ8CE23 124 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms