RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Prr19B2RW88 366 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 C1qtnf9Q4ZJN1 333 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Dmrt3Q80WT2 476 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gtsf1lQ9CWD0 151 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Klk1b4P00757 256 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 C1ql2Q8CFR0 287 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tm4sf20Q9CQY8 226 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Kif26aQ52KG5 1881 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Trav21-dv12A0A075B6C4 109 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 E430018J23RikE9PZQ8 461 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Klk1b22P15948 259 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Olfr484Q8VFD3 321 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm28038F7BCN9 126 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Nkx2-8O70584 235 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 P01675 107 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 P01676 107 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 P01677 107 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 P01678 107 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm13030A2APQ6 143 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Defa27F2Z403 93 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hist1h2bmP10854 126 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hist1h2bhQ64478 126 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hist2h2bbQ64525 126 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hist1h2bcQ6ZWY9 126 aaKnown RBP10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Znhit1Q8R331 154 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 CenpvQ9CXS4 252 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm29289A0A087WPY7 166 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm4064A0A087WR82 380 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm10352B2RWR6 380 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm21693J3QK27 380 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Rbmy1a1O35698 380 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cd59bP58019 129 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Znf691Q3TDE8 283 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ly6g6fB2RXM6 300 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Snx22Q8C084 192 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 2210407C18RikQ6YI28 220 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Spink1P09036 80 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 SellP18337 372 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Olfr1373Q7TQT6 311 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ighv5-6A0A075B5Q0 117 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cmc4Q61908 68 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Olfr1402Q8VET1 320 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Lgals6O54891 301 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hist1h4aP62806 103 aaKnown RBP10□□□□□ -0.81
Trim56-201ENSMUST00000054384 QrfpQ8CE23 124 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cysltr1Q99JA4 352 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Notch3Q61982 2318 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Trav16d-dv11A0A075B617 117 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Olfr317Q5NCD6 327 aa10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Iba57Q8CAK1 358 aaKnown RBP10□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ighv5-4A0A075B5P9 117 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Col6a4A2AX52 2309 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Trav4-4-dv10A0A075B651 110 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm11232Q5SPI8 295 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Dkk1O54908 272 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 GrhprQ91Z53 328 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ltbp4Q8K4G1 1666 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm21789J3QMZ1 123 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm10428J3QNV7 132 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm21870J3QPN2 123 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm21883J3QPV3 123 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gata2O09100 480 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Timp3P39876 211 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 OstcQ78XF5 149 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 LgalslbQ7TPX9 165 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tspan2Q922J6 221 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 TroQ6DIC6 2087 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tmem29A2ANF5 204 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 YrdcQ3U5F4 280 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Trav6d-4Q5R1I0 115 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ly6lH3BJG9 140 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Thy1P01831 162 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 Lamtor2Q9JHS3 125 aa9.99□□□□□ -0.81
Trim56-201ENSMUST00000054384 F5O88783 2183 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 MpzP27573 248 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cd69P37217 199 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Fblim1Q71FD7 375 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Pxt1Q8K459 51 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tanc2A2A690 1994 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Klf13Q9JJZ6 289 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hs3st3b1Q9QZS6 390 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm21370Q3T9V6 190 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 4930596D02RikQ3V0H9 216 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tmem219Q9D123 240 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Fam208bQ5DTT3 2382 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tet1Q3URK3 2007 aaKnown RBP9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 NracQ8BNX7 165 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Zfp646Q6NV66 1788 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 DysfQ9ESD7 2090 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cd200r5Q8BTP3 270 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Trav8-1A0A075B641 109 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm6871L7N248 545 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 UngP97931 306 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Znf787Q8BIF9 381 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 Higd1bQ99JY6 98 aa9.98□□□□□ -0.81
Trim56-201ENSMUST00000054384 MsmbO08540 113 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Mrpl27Q99N92 148 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Vwc2lQ505H4 222 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gng7Q61016 68 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Zpld1Q8BGZ8 415 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 65.8 ms